EG026634

Overview
NameEG026634
Unique NameEG026634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length493
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14242 contig Ccv1_Contig14242:432..924. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EG026634 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.229e-12
Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 3 
Query:    9 PALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 332
            PA   L +LI D+    T+DFVF+DADK  Y  Y++  ++L++ GG+I  DN L  G  VA P+A+++  ++    +++ LN  +  D R+    L IADG+TL  +I
Sbjct:  129 PASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGR-VADPNANVEPNLV----AIRALNDKILADKRVTKSLLPIADGITLITKI 230
[Close]
BLAST of EG026634 vs. ExPASy Swiss-Prot
Match: CMTD1_HUMAN (Catechol-O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.026e-11
Identity = 39/108 (36.11%), Postives = 60/108 (55.56%), Query Frame = 3 
Query:    9 PALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 332
            PAL  LD+L+   +  GTFD   VDADK N   Y++R ++L++ GG++     LW G V+  P  D+        + V+ LN+ +  D R+ I  L + DG+TL  +I
Sbjct:  162 PALETLDELLAAGEA-GTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVA------AECVRNLNERIRRDVRVYISLLPLGDGLTLAFKI 262
The following BLAST results are available for this feature:
BLAST of EG026634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CAMT2_DICDI1.229e-1237.96Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]
CMTD1_HUMAN3.026e-1136.11Catechol-O-methyltransferase domain-containing pro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3DF10ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG026634 ID=EG026634; Name=EG026634; organism=Citrus clementina; type=EST; length=493bp
GAGAAGGCCCTGCTCTTCCTCTTCTTGATCAATTGATCCAAGACGAAAAA
TATCATGGGACATTCGACTTCGTCTTTGTTGATGCTGACAAGAATAACTA
CATTAATTACCACAAGAGGCTTATTGAGCTTGTGAAGGTTGGGGGAGTGA
TTGGCTACGACAACACCTTGTGGGGTGGATCTGTGGTGGCACAACCTGAT
GCCGACCTGGATGAGCTAATCTTAGGCTGGAGGGATTCTGTGCAGGAACT
CAACAAGGCCCTGGCCGTTGATCCAAGGATTGAGATTTGCCAGCTCTCCA
TTGCTGATGGGGTTACATTATGTCGTCGCATTGGCTGATCCTCTCAATTT
TCACTCACGAGACTGGTTGTGTCGTAACTTTTAAACTATACTATGTGTGG
TTATGACAGTAAAATCCACAAATAAATTAGACCGATGAGTGTTTGGAGAA
ATGTATTATTGTTTTTCTTAAGTTAATAAATTTTAAAAATAAT
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