EH406215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FBRL_CAEEL (rRNA 2'-O-methyltransferase fibrillarin OS=Caenorhabditis elegans GN=fib-1 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 8.388e-44 Identity = 88/117 (75.21%), Postives = 98/117 (83.76%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYRMPKKQK 352 AKKR NV+PI+EDARHP KYRMLVGMVDVIFSDVAQPDQARI+ALNA FL+ GGH VISIKANCIDST EAVF EV KL++++FKP EQVTLEP+ERDHA VV YR K +K Sbjct: 235 AKKRPNVVPIVEDARHPHKYRMLVGMVDVIFSDVAQPDQARIVALNAQNFLRNGGHAVISIKANCIDSTAEPEAVFAGEVNKLKEEKFKPLEQVTLEPYERDHAVVVAVYRPVKGKK 351
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FBRL3_ARATH (Putative rRNA 2'-O-methyltransferase fibrillarin 3 OS=Arabidopsis thaliana GN=FIB3 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.698e-42 Identity = 82/115 (71.30%), Postives = 98/115 (85.22%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYRMPKK 346 A+KRTNVIPIIEDARHPAKYRMLVGMVD+IFSDV P+QA IL+LNASYFLK+GGHF+ISIKAN IDST+ AE V+Q EV+KLQ ++ +P E + L+ E HACV GGYR+P+K Sbjct: 178 AEKRTNVIPIIEDARHPAKYRMLVGMVDIIFSDVNHPEQANILSLNASYFLKSGGHFMISIKANSIDSTIAAETVYQMEVEKLQMEELRPTEILHLDSCEEKHACVFGGYRLPRK 292
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FBRL_CANGA (rRNA 2'-O-methyltransferase fibrillarin OS=Candida glabrata GN=NOP1 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 5.627e-40 Identity = 80/110 (72.73%), Postives = 92/110 (83.64%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGY 331 AKKR NVIPIIEDARHP KYRMLVGMVD +F+DVAQPDQARI+ALN+ FLK G VISIKANCIDSTV AE VF EV+KL++++ KP EQ+TLEP+ERDH V+G Y Sbjct: 207 AKKRPNVIPIIEDARHPQKYRMLVGMVDAVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQKLREEKIKPLEQLTLEPYERDHCIVIGRY 316
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FBRL_ASHGO (rRNA 2'-O-methyltransferase fibrillarin OS=Ashbya gossypii GN=NOP1 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 7.349e-40 Identity = 79/110 (71.82%), Postives = 92/110 (83.64%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGY 331 AKKR NVIPIIEDARHP KYRML+GMVD +F+DVAQPDQARI+ALN+ FLK G VISIKANCIDSTV AE VF EV+KL++++ KP EQ+TLEP+ERDH V+G Y Sbjct: 212 AKKRPNVIPIIEDARHPQKYRMLIGMVDAVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQKLREEKIKPLEQLTLEPYERDHCIVIGRY 321
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FBRL_YEAST (rRNA 2'-O-methyltransferase fibrillarin OS=Saccharomyces cerevisiae GN=NOP1 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 9.597e-40 Identity = 79/110 (71.82%), Postives = 92/110 (83.64%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGY 331 AKKR N+IPIIEDARHP KYRML+GMVD +F+DVAQPDQARI+ALN+ FLK G VISIKANCIDSTV AE VF EV+KL++++ KP EQ+TLEP+ERDH VVG Y Sbjct: 211 AKKRPNIIPIIEDARHPQKYRMLIGMVDCVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQKLREERIKPLEQLTLEPYERDHCIVVGRY 320
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FBRL_LEIMA (rRNA 2'-O-methyltransferase fibrillarin OS=Leishmania major PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 9.597e-40 Identity = 81/115 (70.43%), Postives = 93/115 (80.87%), Query Frame = 2 Query: 8 KRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYRMPKKQK 352 KR ++PI+EDAR+P KYRMLV MVD IF DVAQPDQARILALNA FL+ GGH+VISIKANCIDST+ A V SE+ KL++D+ KP EQV+LEPFERDHA VVG YR KK K Sbjct: 182 KRRPIVPIVEDARYPMKYRMLVPMVDCIFMDVAQPDQARILALNAQAFLQNGGHYVISIKANCIDSTLEAPVVIASELNKLKKDKLKPLEQVSLEPFERDHAVVVGVYRPVKKSK 296
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FBRL_DEBHA (rRNA 2'-O-methyltransferase fibrillarin OS=Debaryomyces hansenii GN=NOP1 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.253e-39 Identity = 79/110 (71.82%), Postives = 92/110 (83.64%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGY 331 AKKR NVIPII+DARHP KYRML+GMVD +F+DVAQPDQARI+ALN+ FLK G VISIKANCIDSTV AE VF EV+KL++++ KP EQ+TLEP+ERDH VVG Y Sbjct: 213 AKKRPNVIPIIDDARHPQKYRMLIGMVDAVFADVAQPDQARIIALNSHLFLKDQGTVVISIKANCIDSTVDAETVFAREVQKLREERIKPLEQLTLEPYERDHCIVVGRY 322
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FBRL_SCHPO (rRNA 2'-O-methyltransferase fibrillarin OS=Schizosaccharomyces pombe GN=fib1 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 8.125e-39 Identity = 78/110 (70.91%), Postives = 92/110 (83.64%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGY 331 AKKRTNVIPI+EDARH KYRMLVGMVDV+F+DVAQPDQARI+ALNA+ FLK G VIS+KA+CIDST A VF EVKK+Q+++ KP EQ+TLEP+ERDH +VG Y Sbjct: 192 AKKRTNVIPIVEDARHVQKYRMLVGMVDVVFADVAQPDQARIVALNAAAFLKNEGGVVISVKASCIDSTADAAVVFAREVKKMQEEKIKPQEQLTLEPYERDHCIIVGKY 301
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FBRL_TETTH (rRNA 2'-O-methyltransferase fibrillarin OS=Tetrahymena thermophila GN=FIB PE=2 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 5.266e-38 Identity = 75/111 (67.57%), Postives = 91/111 (81.98%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 334 AKKRTNV+PII DAR P +YR LVGMVDV+F+DVAQPDQARI+ +N YFLK GGHF+ISIKA CIDST VF +EV+KL+++ KP +Q+TLEP+ERDHA V+G YR Sbjct: 183 AKKRTNVVPIIGDARKPQEYRFLVGMVDVVFADVAQPDQARIMGMNCQYFLKNGGHFLISIKACCIDSTNEPAVVFAAEVQKLKEEGLKPEQQLTLEPYERDHAMVLGSYR 293
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FBRL_DICDI (rRNA 2'-O-methyltransferase fibrillarin OS=Dictyostelium discoideum GN=fbl PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.001e-37 Identity = 73/112 (65.18%), Postives = 96/112 (85.71%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV-TLEPFERDHACVVGGYR 334 AKKRTNVIPIIEDARHP KYRML+GMVDV+F+DVAQP+QA+I+A N++YFLK GHF+ISIKA+CIDST P E V Q+E+ KL++++ +P + TL+P+ER+H+ V+G YR Sbjct: 216 AKKRTNVIPIIEDARHPQKYRMLIGMVDVVFADVAQPNQAQIVAQNSAYFLKNEGHFIISIKASCIDSTAPTEVVVQNEITKLKKEKLRPQHLLKTLDPYERNHSLVIGVYR 327 The following BLAST results are available for this feature:
BLAST of EH406215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406215 ID=EH406215; Name=EH406215; organism=Citrus clementina; type=EST; length=562bpback to top |