EH406215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_METM5 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=flpA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.223e-20 Identity = 49/106 (46.23%), Postives = 68/106 (64.15%), Query Frame = 2 Query: 8 KRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVG 325 +R N+IP++ DA P Y +V VDVIF DVAQP+QA IL NA +FLK G+ +ISIKA +D T +F + K L + F+ ++V +EPFE+DH +VG Sbjct: 120 ERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEILVKNAKWFLKENGYAMISIKARSVDVTKNPREIFAEQKKILIEGGFEIVDEVNIEPFEKDHMMMVG 225
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_META3 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=flpA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.903e-20 Identity = 50/108 (46.30%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVG 325 +K R N+IPI+ DA +P +Y +V VDVIF DVAQP QA IL NA +FLK GG+ +ISIKA +D + +F+ + + L + F+ ++V +EPFE+DH VG Sbjct: 119 SKDRKNLIPILGDATNPVEYSNVVEEVDVIFEDVAQPKQAEILVNNAKWFLKEGGYGMISIKARSVDVLRNPKEIFEEQKQILIEGGFEIVDEVNIEPFEKDHILFVG 226
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_METM7 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=flpA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.792e-20 Identity = 48/106 (45.28%), Postives = 68/106 (64.15%), Query Frame = 2 Query: 8 KRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVG 325 +R N+IP++ DA P Y +V VDVIF DVAQP+QA IL NA +FLK G+ +ISIKA +D T +F + K L + F+ +++ +EPFE+DH +VG Sbjct: 120 ERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEILVKNARWFLKENGYAMISIKARSVDVTKNPREIFAEQKKILIEGGFEIVDEINIEPFEKDHMMMVG 225
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_AERPE (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Aeropyrum pernix GN=flpA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.447e-20 Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 5 KKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACV 319 + R N+ PI+ DAR P KYR LV VD +++DVAQP+QA I+ NA +FL+ GG+ +++IKA ID T V++ E+K L + + V L+PF+RDHA + Sbjct: 123 RDRRNIFPILGDARFPEKYRHLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDPFDRDHAMI 227
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_SULAC (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus acidocaldarius GN=flpA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.192e-19 Identity = 44/111 (39.64%), Postives = 70/111 (63.06%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 334 A+ R N+ PI+ DAR P Y+ LV VD+++ D+AQP++ I NA +FLK G+ +I+IK+ ID T ++ +E KKL+ F E + L+P+++DHA +V Y+ Sbjct: 121 AQYRPNMFPILADARFPQYYKSLVENVDIVYVDIAQPNETEIAMYNARFFLKKNGYMMIAIKSRSIDVTKDPREIYNAEAKKLEDAGFDIREVLELDPYDKDHAMIVVKYK 231
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_METMA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanosarcina mazei GN=flpA PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 2.717e-18 Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVT---LEPFERDHACVV 322 A +R N+ PI+ DA P Y +V VDVIF DVAQP+QA I A NA FLK G+ ++SIKA ID+ + +F+ EVKKL+Q FE +T L P+ DH V+ Sbjct: 113 ASRRKNIFPILADAGKPDSYAHIVEPVDVIFQDVAQPNQAEIAARNAVRFLKKDGYLLLSIKARSIDTAASPKEIFKEEVKKLEQAFEPGFEVLTARELMPYHEDHLGVM 222
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_METTH (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanobacterium thermoautotrophicum GN=flpA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.635e-18 Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 2 Query: 5 KKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 322 + R N+ P++EDA P Y +V D+++ DVAQPDQ R+ N FLK G+ +I IKA ID T +F+ EV KL+ F+ +QV L P+E+DH V+ Sbjct: 114 ESRKNMAPLLEDASRPLSYLRMVEAADLVYCDVAQPDQTRLFIENMDCFLKRDGYGLIMIKARSIDVTRSPRKIFREEVGKLESSGFRIIDQVGLNPYEKDHMAVL 219
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_METAC (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanosarcina acetivorans GN=flpA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.033e-17 Identity = 49/110 (44.55%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVT---LEPFERDHACVV 322 A +R N+ PI+ DA P Y +V VD+IF DVAQP+QA I A NA+ FL G+ ++SIKA ID+ + +F+ EVKKL+Q FE +T L P+ DH V+ Sbjct: 113 ASRRKNIFPILADAGKPDSYAHIVEPVDLIFQDVAQPNQAEIAARNAARFLNKNGYLLLSIKARSIDTAASPKEIFKEEVKKLEQAFEPGFEILTARDLMPYHEDHLGVL 222
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_ARCFU (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Archaeoglobus fulgidus GN=flpA PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.349e-17 Identity = 46/102 (45.10%), Postives = 66/102 (64.71%), Query Frame = 2 Query: 5 KKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 310 ++R N+IP++ DA P KY +V VD+I+ D+AQ +Q IL NA +FLK G VI +KA IDST E VF+S +K+++ D FK + +L P+ RDH Sbjct: 102 RERNNIIPLLFDASKPWKYSGIVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSLMPYHRDH 202
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_METBF (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=flpA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.761e-17 Identity = 50/110 (45.45%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQ---DQFKPFEQVTLEPFERDHACVV 322 A +R N+ PI+ DA P Y LV VD+IF DVAQP+QA I A NA FLK G+ ++SIKA ID+ + VF++EVKKL+Q +F+ L P+ DH V+ Sbjct: 113 ASRRKNIHPILADAGKPDSYSHLVEPVDLIFQDVAQPNQAEIAARNAVRFLKREGYLLLSIKARSIDTVAKPKEVFKAEVKKLEQAFEPRFEILNAKDLMPYHEDHLGVL 222 The following BLAST results are available for this feature:
BLAST of EH406215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EH406215 ID=EH406215; Name=EH406215; organism=Citrus clementina; type=EST; length=562bpback to top |