EH406215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_METWO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanobacterium wolfei GN=flpA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.142e-16 Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 2 Query: 11 RTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 322 R N++P++EDA P Y +V D+++ DVAQPDQ + N FLK G+ +I +KA ID T +F+ E KL+ F+ +QV L+P+E+DH ++ Sbjct: 114 RGNMVPLLEDASRPLDYMRMVENADLVYCDVAQPDQTGLFIRNMDCFLKDDGYGLIMVKARSIDVTRSPRKIFREEAGKLRDSGFRIIDQVGLKPYEKDHMAIL 217
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_NANEQ (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Nanoarchaeum equitans GN=flpA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.262e-15 Identity = 41/114 (35.96%), Postives = 65/114 (57.02%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYRMPK 343 AKKR N++PI+ DA P Y+ +V DVI+ DVAQP Q I N +F K +++KA ID T + +F+ +KL++ + + E + L+P+ +DH V ++PK Sbjct: 119 AKKRKNIVPILADANQPETYQHIVVQSDVIYQDVAQPHQVEIFLKNLRFFAKPNAIGFLAVKARSIDVTKDPKVIFREVERKLREAKLQLLESIRLDPYHKDHMMFV--VKVPK 230
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_METTP (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=flpA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.262e-15 Identity = 45/107 (42.06%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 322 A++R N+IP++ DA P YR +V VD+++ DVAQ +QA I + NAS +LK G V+ IKA IDST + +F E+++L + +V L P RDH VV Sbjct: 104 AEQRENIIPVLGDAARPETYRRIVEPVDLLYQDVAQRNQAEIASRNASIYLKPNGLMVVMIKARSIDSTARSTEIFDEEIRRL--SGVEVLRRVDL-PHHRDHVAVV 207
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_HALMA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Haloarcula marismortui GN=flpA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.463e-11 Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 322 A+ R N+ P+++DAR P Y +V VDV+ DVA QAR+ LN FL G + +IKA D T +AVF S V+ +++ E L+P+ DH +V Sbjct: 100 AESRRNLFPLLKDARKPESYAHVVEPVDVVVQDVATRGQARVATLN-KQFLTDDGRLLAAIKARSEDVTADPDAVFDS-VRAELSAEYELLETARLDPYHEDHLGIV 204
BLAST of EH406215 vs. ExPASy Swiss-Prot
Match: FLPA_METMJ (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=flpA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.202e-11 Identity = 37/108 (34.26%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 2 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCID-STVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 322 A++R N++PI+ DA P +Y + VD+++ DVAQP+Q I N FLK GGH V+ +K +D PAE + + + +++ + L+P+ DHA +V Sbjct: 91 ARRRRNIVPIMADASRPEEYAPFMEAVDLVYQDVAQPNQVEIAERNL-VFLKPGGHLVLMLKTRSVDVRRDPAEVL--AGARTGLEERLDIADVRWLDPYHHDHAAIV 195 The following BLAST results are available for this feature:
BLAST of EH406215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406215 ID=EH406215; Name=EH406215; organism=Citrus clementina; type=EST; length=562bpback to top |