EH406239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BRASB (50S ribosomal protein L2 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplB PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.280e-34 Identity = 73/127 (57.48%), Postives = 90/127 (70.87%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GTI+HNIEV G+GG+L R+AGT A+I+ + +VRL SG ++L+ RCR TIG VSNP H + KAG+ RW+GRRP RGVAMNP+DHPHGGGEGR+ GR +TPWGKP K G KT Sbjct: 138 GTIVHNIEVKIGKGGQLARSAGTYAQIVGRD-QDYVIVRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRKRWMGRRPHNRGVAMNPIDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKT 258
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_DICTD (50S ribosomal protein L2 OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rplB PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.284e-34 Identity = 77/127 (60.63%), Postives = 90/127 (70.87%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GT+IHN+E+ PG+GG+LVRAAGT+A+IL + + VRLPSG +L D CRATIG VSN H L KAG+SRWLGRRP VRG AMN VDHPHGGGEG++ LTPWGKP GYKT Sbjct: 138 GTLIHNLELYPGRGGQLVRAAGTAAQILGKE-GKWAYVRLPSGEIRLFDLNCRATIGQVSNVDHQNVSLGKAGRSRWLGRRPHVRGSAMNAVDHPHGGGEGKAPIG---HPSPLTPWGKP-TLGYKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BACCN (50S ribosomal protein L2 OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=rplB PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.284e-34 Identity = 74/128 (57.81%), Postives = 94/128 (73.44%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 385 GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ CRAT+G V N SH K+ KAG+SRWLG+RP VRG MNPVDHPHGGGEGR+ GR S ++PWGKP G+KT Sbjct: 138 GTVVHNIELKPGRGGQLVRSAGTSAQVLGKE-GKYVLVRLTSGEVRLVLATCRATVGQVGNESHELIKIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGGEGRAPI----GRKSPMSPWGKP-TLGFKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BRAJA (50S ribosomal protein L2 OS=Bradyrhizobium japonicum GN=rplB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.595e-34 Identity = 72/129 (55.81%), Postives = 92/129 (71.32%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTIIHNIEV G+GG+L R+AGT A+++ + ++RL SG ++L+ RCR TIG VSNP H + KAG++RWLGR+P RGV+MNP+DHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 138 GTIIHNIEVKIGKGGQLARSAGTYAQLVGRD-QDYVIIRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRNRWLGRKPHNRGVSMNPIDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BACCQ (50S ribosomal protein L2 OS=Bacillus cereus (strain Q1) GN=rplB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.595e-34 Identity = 74/128 (57.81%), Postives = 94/128 (73.44%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 385 GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ + CRA +G V N SH K+ KAG+SRWLG+RP VRG MNPVDHPHGGGEGRS GR S ++PWGKP G+KT Sbjct: 138 GTVVHNIELKPGRGGQLVRSAGTSAQVLGKE-GKYVLVRLTSGEVRLVLSACRAAVGQVGNESHELIKIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGGEGRSPI----GRKSPMSPWGKP-TLGFKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BRASO (50S ribosomal protein L2 OS=Bradyrhizobium sp. (strain ORS278) GN=rplB PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.307e-34 Identity = 72/127 (56.69%), Postives = 90/127 (70.87%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GTI+HNIEV G+GG+L R+AGT A+++ + +VRL SG ++L+ RCR TIG VSNP H + KAG+ RW+GRRP RGVAMNP+DHPHGGGEGR+ GR +TPWGKP K G KT Sbjct: 138 GTIVHNIEVKIGKGGQLARSAGTYAQLVGRD-HDYVIVRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRKRWMGRRPHNRGVAMNPIDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKT 258
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_PERMH (50S ribosomal protein L2 OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=rplB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34 Identity = 74/127 (58.27%), Postives = 90/127 (70.87%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GT IHNIE+ PG+GG+LVRAAG SA+IL + VRLPSG +LI +C AT+GTV H KL KAG++RWLG RP VRG AMNPVDHPHGGGEG++ G+ ++PWG+P K GYKT Sbjct: 138 GTFIHNIELTPGKGGQLVRAAGMSAQILGRQ-GDYVQVRLPSGEIRLIHKKCMATVGTVGLAEHELIKLGKAGRARWLGIRPTVRGTAMNPVDHPHGGGEGKT-----FGKHPVSPWGQPTK-GYKT 257
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_NEOSM (50S ribosomal protein L2 OS=Neorickettsia sennetsu (strain Miyayama) GN=rplB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34 Identity = 76/130 (58.46%), Postives = 94/130 (72.31%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTASP 394 GT +HN+E+ PG GG+LVR+AG+SA+++ ++ LV LPSG ++LI + C ATIG VSN KL KAG+SRWLGRRP VRGVAMNPVDHP GGGEG K+SG GR ++PWG P K G KT P Sbjct: 143 GTTVHNVELKPGAGGQLVRSAGSSARVIARD-GNYTLVTLPSGEKRLILSTCHATIGAVSNADRKNTKLGKAGRSRWLGRRPSVRGVAMNPVDHPMGGGEG--KTSG--GRHPVSPWGFPTK-GKKTRDP 266
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BACWK (50S ribosomal protein L2 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34 Identity = 74/128 (57.81%), Postives = 94/128 (73.44%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 385 GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ + CRA+IG V N H K+ KAG+SRWLG+RP VRG MNPVDHPHGGGEGRS GR S ++PWGKP G+KT Sbjct: 138 GTVVHNIELKPGRGGQLVRSAGTSAQVLGKE-GKYVLVRLTSGEVRLVLSACRASIGQVGNEQHELIKIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGGEGRSPI----GRKSPMSPWGKP-TLGFKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BACCR (50S ribosomal protein L2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34 Identity = 74/128 (57.81%), Postives = 94/128 (73.44%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 385 GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ + CRA+IG V N H K+ KAG+SRWLG+RP VRG MNPVDHPHGGGEGRS GR S ++PWGKP G+KT Sbjct: 138 GTVVHNIELKPGRGGQLVRSAGTSAQVLGKE-GKYVLVRLTSGEVRLVLSACRASIGQVGNEQHELIKIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGGEGRSPI----GRKSPMSPWGKP-TLGFKT 259 The following BLAST results are available for this feature:
BLAST of EH406239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406239 ID=EH406239; Name=EH406239; organism=Citrus clementina; type=EST; length=716bpback to top |