EH406239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BART1 (50S ribosomal protein L2 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rplB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.055e-32 Identity = 69/129 (53.49%), Postives = 91/129 (70.54%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTIIHN+E+ PG+GG++ R+AG A+++ ++RL SG ++L+ + C AT+G VSNP HG KAG+SRW G+RP VRGVAMNPVDHPHGGGEGR+ GR ++PWGKP K G +T S Sbjct: 138 GTIIHNVEMKPGKGGQIARSAGAYAQLVGRD-HGMAILRLNSGEQRLVSSSCFATVGAVSNPDHGNINDGKAGRSRWRGKRPHVRGVAMNPVDHPHGGGEGRTSG----GRHPVSPWGKPTK-GKRTRS 260
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_GLUDA (50S ribosomal protein L2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rplB PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.378e-32 Identity = 70/127 (55.12%), Postives = 90/127 (70.87%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GTI+HNIE+ G GGK+ R+AGT A+++ + S + ++L SG +++ C ATIG VSNP + + + KAG+SRWLGRRP RGV MNPVDHPHGGGEGR+ GR +TPWGKP K GYKT Sbjct: 138 GTIVHNIELKQGAGGKMARSAGTYAQLVGKD-SGYAQIKLQSGELRVVRGECMATIGAVSNPDNMNQHMGKAGRSRWLGRRPHNRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GYKT 258
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_GEOSL (50S ribosomal protein L2 OS=Geobacter sulfurreducens GN=rplB PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.378e-32 Identity = 72/127 (56.69%), Postives = 89/127 (70.08%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GTIIHNIE+ G+GG+L R+AGT A+++ + + V+LPSG +++ C ATIG V N H + KAG+SRWLGRRP VRGVAMNPVDHPHGGGEGR+ GR +TPWG P K GYKT Sbjct: 138 GTIIHNIELKIGKGGQLARSAGTFAQLMAKE-GKYAQVKLPSGEVRMVLLDCMATIGQVGNIDHENVSIGKAGRSRWLGRRPKVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGIPTK-GYKT 258
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_SULSY (50S ribosomal protein L2 OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=rplB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 71/127 (55.91%), Postives = 88/127 (69.29%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GT++HNIE+ PG+GG+LVRAAG SA+IL + +RLPSG +L+ +C ATIG V H +L KAG+SRWLG RP VRG AMNP DHPHGGGEGR+ G+ ++PWG P K GYKT Sbjct: 138 GTLVHNIELTPGKGGQLVRAAGMSAQILGRE-GDYVQIRLPSGELRLVYKKCMATIGAVGLAEHELLELGKAGRSRWLGIRPTVRGTAMNPADHPHGGGEGRT-----FGKHPVSPWGLPTK-GYKT 257
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BRUSU (50S ribosomal protein L2 OS=Brucella suis GN=rplB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 70/129 (54.26%), Postives = 90/129 (69.77%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+S W G+RP VRGVAMNPVDHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 138 GTIIHNVELKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSVWRGKRPHVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BRUSI (50S ribosomal protein L2 OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=rplB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 70/129 (54.26%), Postives = 90/129 (69.77%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+S W G+RP VRGVAMNPVDHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 138 GTIIHNVELKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSVWRGKRPHVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BRUO2 (50S ribosomal protein L2 OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=rplB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 70/129 (54.26%), Postives = 90/129 (69.77%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+S W G+RP VRGVAMNPVDHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 138 GTIIHNVELKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSVWRGKRPHVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BRUMB (50S ribosomal protein L2 OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=rplB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 70/129 (54.26%), Postives = 90/129 (69.77%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+S W G+RP VRGVAMNPVDHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 138 GTIIHNVELKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSVWRGKRPHVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BRUC2 (50S ribosomal protein L2 OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=rplB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 70/129 (54.26%), Postives = 90/129 (69.77%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+S W G+RP VRGVAMNPVDHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 138 GTIIHNVELKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSVWRGKRPHVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BRUAB (50S ribosomal protein L2 OS=Brucella abortus GN=rplB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 70/129 (54.26%), Postives = 90/129 (69.77%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+S W G+RP VRGVAMNPVDHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 138 GTIIHNVELKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSVWRGKRPHVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260 The following BLAST results are available for this feature:
BLAST of EH406239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406239 ID=EH406239; Name=EH406239; organism=Citrus clementina; type=EST; length=716bpback to top |