EH406239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BRUA2 (50S ribosomal protein L2 OS=Brucella abortus (strain 2308) GN=rplB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 70/129 (54.26%), Postives = 90/129 (69.77%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+S W G+RP VRGVAMNPVDHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 138 GTIIHNVELKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSVWRGKRPHVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BRUA1 (50S ribosomal protein L2 OS=Brucella abortus (strain S19) GN=rplB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 70/129 (54.26%), Postives = 90/129 (69.77%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+S W G+RP VRGVAMNPVDHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 138 GTIIHNVELKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSVWRGKRPHVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BEII9 (50S ribosomal protein L2 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rplB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 71/127 (55.91%), Postives = 89/127 (70.08%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GTI+HNIE+ G+G +VR+AGT A+++ + +VRL SG ++LI +C AT+G VSNP H + KAG+SRWLGRRP RGV MNPVDHPHGGGEGR+ GR +TPWGKP K G KT Sbjct: 138 GTIVHNIEMKIGKGAAMVRSAGTYAQVVGRD-QGYVIVRLNSGEQRLIHGQCFATVGAVSNPDHMNASIGKAGRSRWLGRRPHNRGVTMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKT 258
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_MESSB (50S ribosomal protein L2 OS=Mesorhizobium sp. (strain BNC1) GN=rplB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32 Identity = 67/129 (51.94%), Postives = 89/129 (68.99%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTI+HN+E+ PG+GG++ R+AG+ A+++ ++RL SG ++L+ C AT+G VSNP H L KAG+ RWLG+RP RGV MNPVDHPHGGGEGR+ GR ++PWGKP K G KT S Sbjct: 139 GTIVHNVELKPGKGGQIARSAGSYAQLVGRD-QGMAILRLNSGEQRLVSGTCMATVGAVSNPDHANVSLGKAGRKRWLGKRPHNRGVTMNPVDHPHGGGEGRTSG----GRHPVSPWGKPTK-GRKTRS 261
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_GEOSW (50S ribosomal protein L2 OS=Geobacillus sp. (strain WCH70) GN=rplB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32 Identity = 72/128 (56.25%), Postives = 91/128 (71.09%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 385 GT +HNIE+ PG+GG+LVRAAGTSA++L + + +VRL SG ++I CRAT+G V N H K+ KAG++RWLG RP VRG MNPVDHPHGGGEG++ GR S +TPWGKP G+KT Sbjct: 138 GTFVHNIELKPGRGGQLVRAAGTSAQVLGKE-GKYVIVRLASGEVRMILGACRATVGEVGNEQHELVKIGKAGRARWLGIRPTVRGSVMNPVDHPHGGGEGKAPI----GRKSPMTPWGKP-TLGFKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_GEOMG (50S ribosomal protein L2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rplB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32 Identity = 71/127 (55.91%), Postives = 89/127 (70.08%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GTIIHNIE+ G+GG+L R+AGT A+++ + + V+LPSG +++ C AT+G V N H + KAG+SRWLGRRP VRGVAMNPVDHPHGGGEGR+ GR +TPWG P K GYKT Sbjct: 138 GTIIHNIELKIGKGGQLARSAGTFAQLMAKE-GKYAQVKLPSGEVRMVLLDCMATVGQVGNIDHENVTIGKAGRSRWLGRRPKVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGIPTK-GYKT 258
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_BARHE (50S ribosomal protein L2 OS=Bartonella henselae GN=rplB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32 Identity = 69/129 (53.49%), Postives = 90/129 (69.77%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 GTIIHN+E+ PG+GG++ R+AG A+++ ++RL SG ++L+ + C AT+G VSNP H KAG+SRW GRRP VRGVAMNPVDHPHGGGEGR+ GR ++PWGKP K G +T S Sbjct: 138 GTIIHNVEMKPGKGGQIARSAGAYAQLVGRD-QGMAILRLNSGEQRLVSSGCFATVGAVSNPDHANINDGKAGRSRWRGRRPHVRGVAMNPVDHPHGGGEGRTSG----GRHPVSPWGKPTK-GKRTRS 260
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_SINMW (50S ribosomal protein L2 OS=Sinorhizobium medicae (strain WSM419) GN=rplB PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.070e-32 Identity = 69/129 (53.49%), Postives = 90/129 (69.77%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 G+IIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A+IG VSNP HG KAG+SRW G+RP VRGV MNPVDHPHGGGEGR+ GR +TPWGKP K G +T S Sbjct: 139 GSIIHNVEMKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVHGSCLASIGAVSNPDHGNINDGKAGRSRWRGKRPHVRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKRTRS 261
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_RHOCS (50S ribosomal protein L2 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rplB PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.070e-32 Identity = 68/127 (53.54%), Postives = 88/127 (69.29%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 385 GTI+HN+E+ PG+GG+L RAAGT +++ + ++LPSG +++ C ATIG VSNP + KAG++RWLGRRP VRGV MNP+DHPHGGGEGR+ GR +TPWGKP K G KT Sbjct: 139 GTIVHNVELKPGKGGQLARAAGTYLQLVGRD-QGYAQLKLPSGELRVVRGECFATIGAVSNPDQANVVIGKAGRNRWLGRRPSVRGVVMNPIDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKT 259
BLAST of EH406239 vs. ExPASy Swiss-Prot
Match: RL2_RHISN (50S ribosomal protein L2 OS=Rhizobium sp. (strain NGR234) GN=rplB PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.070e-32 Identity = 69/129 (53.49%), Postives = 90/129 (69.77%), Query Frame = 2 Query: 5 GTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 391 G+IIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A+IG VSNP HG KAG+SRW G+RP VRGV MNPVDHPHGGGEGR+ GR +TPWGKP K G +T S Sbjct: 139 GSIIHNVEMKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVHGSCLASIGAVSNPDHGNINDGKAGRSRWRGKRPHVRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKRTRS 261 The following BLAST results are available for this feature:
BLAST of EH406239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406239 ID=EH406239; Name=EH406239; organism=Citrus clementina; type=EST; length=716bpback to top |