EH406255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NQRF_YERPA (Na(+)-translocating NADH-quinone reductase subunit F OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=nqrF PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.603e-11 Identity = 46/162 (28.40%), Postives = 75/162 (46.30%), Query Frame = 3 Query: 99 PQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLN--QPPESWNGGVGFVSKEMIQTHC---PAPASDIQVLRCGPPPMNKAMAAHLEALGYTSE 569 P G MS + ++ GD + + GP G F + GG+G+ PM L+ + K K+ Y + ++ +E+ D A+ D F + L+ QP ++W G GF+ +++ + PAP D + CGPP MN A+ L+ LG E Sbjct: 240 PPGIMSSYIWSLKPGDKVVISGPFGEFFAKDTDAEMV-FIGGGAGMAPMRSHIFDQLKRLHSKRKISFWYGARSRREMFYEEDFDQLQAEN-DNFRWHVALSDPQPEDNWTGYTGFIHNVLLENYLKDHPAP-EDCEFYMCGPPMMNAAVIKMLKDLGVEDE 398
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NQRF_YERP3 (Na(+)-translocating NADH-quinone reductase subunit F OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=nqrF PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.603e-11 Identity = 46/162 (28.40%), Postives = 75/162 (46.30%), Query Frame = 3 Query: 99 PQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLN--QPPESWNGGVGFVSKEMIQTHC---PAPASDIQVLRCGPPPMNKAMAAHLEALGYTSE 569 P G MS + ++ GD + + GP G F + GG+G+ PM L+ + K K+ Y + ++ +E+ D A+ D F + L+ QP ++W G GF+ +++ + PAP D + CGPP MN A+ L+ LG E Sbjct: 240 PPGIMSSYIWSLKPGDKVVISGPFGEFFAKDTDAEMV-FIGGGAGMAPMRSHIFDQLKRLHSKRKISFWYGARSRREMFYEEDFDQLQAEN-DNFRWHVALSDPQPEDNWTGYTGFIHNVLLENYLKDHPAP-EDCEFYMCGPPMMNAAVIKMLKDLGVEDE 398
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NQRF_SHEDO (Na(+)-translocating NADH-quinone reductase subunit F OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=nqrF PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.603e-11 Identity = 51/197 (25.89%), Postives = 85/197 (43.15%), Query Frame = 3 Query: 21 EEVIKPYTPTTLDSDVGHFELVIKM---------YPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP--ESWNGGVGFVSKEMIQTHC---PAPASDIQVLRCGPPPMNKAMAAHLEALGYTSE 569 EE I+ Y+ + G L +++ P G+MS + ++ GD + + GP G F + GG+G+ PM L+ K K+ Y + ++ E+ DG AA+ + F + L+ P + W G GF+ + + + AP D + CGPP MN A+ + L+ LG E Sbjct: 206 EETIRAYSMANYPEEFGIIMLNVRIATPPPRNLSLPCGKMSSYIWSLKAGDKVTISGPFGEFFAKDTDAEMV-FIGGGAGMAPMRSHLFDQLKRLKSKRKMSFWYGARSKREMFYVEDFDGLAAEN-ENFQWHVALSDPQAEDEWTGYTGFIHNVLYENYLRDHDAP-EDCEFYMCGPPMMNAAVISMLKDLGVEDE 399
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NQRF_SERP5 (Na(+)-translocating NADH-quinone reductase subunit F OS=Serratia proteamaculans (strain 568) GN=nqrF PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.603e-11 Identity = 50/181 (27.62%), Postives = 79/181 (43.65%), Query Frame = 3 Query: 42 TPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLN--QPPESWNGGVGFVSKEMIQTHC---PAPASDIQVLRCGPPPMNKAMAAHLEALGYTSE 569 TP D DV P G MS + ++ GD + + GP G F + GG+G+ PM L K K+ Y + ++ +E+ + A+ + FT + L+ QP ++W G GF+ +++ + PAP D + CGPP MN A+ L+ LG E Sbjct: 231 TPPPRDPDV----------PPGIMSSYIWSLKAGDKVTISGPFGEFFAKDTDAEMI-FIGGGAGMAPMRSHIFDQLNRLKSKRKITFWYGARSLREMFYEEDFNQLQAEN-ENFTWHVALSDPQPEDNWTGYTGFIHNVLLENYLRNHPAP-EDCEFYMCGPPMMNAAVIKMLKDLGVEDE 398 The following BLAST results are available for this feature:
BLAST of EH406255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 144
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406255 ID=EH406255; Name=EH406255; organism=Citrus clementina; type=EST; length=755bpback to top |