EH406255

Overview
NameEH406255
Unique NameEH406255
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15071 contig Ccv1_Contig15071:287..1041. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_LACBS (NADH-cytochrome b5 reductase 1 OS=Laccaria bicolor (strain S238N-H82) GN=MCR1.1 PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 8.035e-50
Identity = 93/185 (50.27%), Postives = 123/185 (66.49%), Query Frame = 3
Query:    9 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAP-ASDIQVLRCGPPPMNKAMAAHLEALGY 560
            D  G+ +++ YTP +  +  G FEL+IK Y +G +S H   +++GD L VKGPKG F+Y PG     GM AGG+G+ PM Q+ RAIL+NP D+T + LIYANV  EDILL+ ELD  A  Y  +F ++YVLN PP  W GGVGFV+KE I+   P P  S+ ++L CGPPPM  AM  +LE + Y
Sbjct:  108 DINGKNIVRSYTPISRQNARGRFELIIKTYEKGNISRHVASLKIGDTLRVKGPKGNFKYTPGLTAHLGMIAGGTGLAPMIQIVRAILQNPPDRTNITLIYANVNEEDILLRAELDALAMGYESRFNLFYVLNNPPSGWTGGVGFVTKEHIKDLLPNPNESNSKILICGPPPMVTAMKKNLEEIKY 292          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_NEUCR (NADH-cytochrome b5 reductase 1 OS=Neurospora crassa GN=cbr-1 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.988e-49
Identity = 94/186 (50.54%), Postives = 127/186 (68.28%), Query Frame = 3
Query:    9 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEN--PNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 560
            D   +E+++ YTP + D   G+F+L+IK YP G +S H   ++VG  + VKGPKG F Y P  VR FGM AGG+GITPM QV RAI+      D+T+V LI+ANVT +DILLKE+LD   A+      ++YVL++PPE W GGVGFV++EM++   P PASD+++L CGPPPM   +    EALG+
Sbjct:  110 DGSTKEIVRSYTPISGDHQPGYFDLLIKSYPTGNISKHMASLQVGQTIRVKGPKGAFVYTPNMVRHFGMVAGGTGITPMLQVIRAIVRGRAAGDRTEVDLIFANVTAQDILLKEDLDALVAQ-DKGIRVHYVLDRPPEGWTGGVGFVTQEMVEKLLPKPASDVKILLCGPPPMISGLKKATEALGF 294          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_CRYNE (NADH-cytochrome b5 reductase 1 OS=Cryptococcus neoformans GN=CBR1 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.515e-48
Identity = 91/188 (48.40%), Postives = 124/188 (65.96%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAP-------ASDIQVLRCGPPPMNKAMAAHLEALGY 560
            G++V++ YTPTTLD D GHF+LV+K Y +G +S +   + +G  + VKGPKG+F Y P       M AGG+GITPM+Q+ ++ ++ P DKT++ LIYAN+  +DILLK+E+D   AK   +F + YVLN PPE W GGVGFV+KEMI+   P+            +VL CGPPPM  AM  HL  +GY
Sbjct:   91 GKQVVRSYTPTTLDDDKGHFDLVVKTYEKGNISRYLSLLTIGQEIKVKGPKGKFVYTPNMAPHLVMIAGGTGITPMYQIIKSSIKTPGDKTRLSLIYANIQEDDILLKKEIDELQAKSNGRFDVKYVLNNPPEGWTGGVGFVTKEMIEEAMPSSGVGSANHGEGHKVLMCGPPPMITAMKGHLAQIGY 278          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_MAGGR (NADH-cytochrome b5 reductase 1 OS=Magnaporthe grisea GN=CBR1 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.376e-48
Identity = 95/186 (51.08%), Postives = 125/186 (67.20%), Query Frame = 3
Query:    9 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEN--PNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 560
            D   +EV++ YTP + D   G+ +L+IK YP G +S +   + VG  + V+GPKG F YQP  VR FGM AGG+GITPM QV RAI+      D T+V LI+ANVT EDILLKE+LD  AA+    F ++YVL++PPE W GGVGFV+++MI    P PA D+++L CGPPPM   +    EALG+
Sbjct:  109 DGSSKEVVRSYTPISGDEQPGYVDLLIKSYPTGNISKYMAGLSVGQSIRVRGPKGAFVYQPNMVRHFGMIAGGTGITPMLQVVRAIVRGRAAGDTTQVDLIFANVTKEDILLKEDLDALAAE-DKGFRVHYVLDRPPEGWTGGVGFVTQDMITKWLPKPADDVKILLCGPPPMVSGLKKATEALGF 293          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_AJECN (NADH-cytochrome b5 reductase 1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.376e-48
Identity = 93/189 (49.21%), Postives = 126/189 (66.67%), Query Frame = 3
Query:    9 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAIL-----ENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 560
            + Q +E+++ YTP + D + G+F+L++K YPQG +S H   +R+G  + V+GPKG   Y P  V+  GM AGG+GITPM Q+ +AI+        ND T+V LI+ANV  +DILLK+ELD   AK  D F ++YVLN PPE W GGVGFV+ +MI+   PA A D +VL CGPPPM  AM    E+LG+
Sbjct:  107 EGQTKEIMRSYTPISSDQEAGYFDLLVKAYPQGNISKHLAGLRIGQTMKVRGPKGAMVYTPNMVKKIGMIAGGTGITPMLQIIKAIIRGRPRNGGNDTTQVDLIFANVNPDDILLKDELDQL-AKEDDGFRVFYVLNNPPEGWEGGVGFVTPDMIRAKLPAAAPDTKVLICGPPPMVSAMKKATESLGF 294          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_VANPO (NADH-cytochrome b5 reductase 1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.367e-47
Identity = 89/182 (48.90%), Postives = 126/182 (69.23%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDV-GHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 560
            G EV++ YTP +LDS+  G+FEL+IK Y QG++S  F  +++GD + V+GPKG + Y     +   M AGGSG+TPM+Q+ ++I ENP DKTKV  IY NV   DILL+++LD FAA  P Q TI+Y+L++P E+W GG G+V+ E+++   PAPA  +Q+L CGP PM  A+     ALG+
Sbjct:   88 GSEVVRSYTPISLDSEAKGYFELLIKSYEQGKISKMFTSLKIGDTIDVQGPKGFYEYTDRSSKHLAMIAGGSGLTPMYQIIKSIAENPKDKTKVTFIYGNVEEIDILLRDDLDKFAASKPGQITIHYLLDKPSENWKGGSGYVTPELMKEKLPAPADGVQLLVCGPLPMVSAIKRSAVALGF 269          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_ASHGO (NADH-cytochrome b5 reductase 1 OS=Ashbya gossypii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.390e-46
Identity = 86/184 (46.74%), Postives = 126/184 (68.48%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDV-GHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQ--PPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 560
            G+E+++ YTPT+LDSD  G+FEL++K Y +G +S    E+ +GD + V+GPKG + Y+P   +  GM AGG+GI+PM+Q+ RAI  NP DKT+V L+Y N T +DILLK ELD   A  PDQF I Y+L++    E W G +G++++ +++ H PAP+S  Q+L CGPPPM  +      +LG+
Sbjct:   88 GKEMLRSYTPTSLDSDATGYFELLVKSYEKGNISKMLAELAIGDRIKVRGPKGFYHYEPNMYKEIGMIAGGTGISPMYQIIRAIFSNPRDKTRVCLVYGNQTKDDILLKPELDAMVAAKPDQFKILYMLDKVAEGEQWEGKLGYITEAIMREHLPAPSSSAQLLLCGPPPMVSSAKRIAVSLGF 271          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_ARATH (NADH-cytochrome b5 reductase-like protein OS=Arabidopsis thaliana GN=At5g20080 PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 7.039e-46
Identity = 92/209 (44.02%), Postives = 134/209 (64.11%), Query Frame = 3
Query:    3 GKDSQGEE--VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAH-------------LEALGYTSEMLFQF 584
            G +++G+   VI+PYTP +     G+F+L+IK+YP G+MS HF  ++ GD L VKGP  +F+Y P   +  GM AGGSGITPM QV  AI++NP D T++ L+YANV+ +DILLK++LD   A +P+   I+Y ++ P ++W GGVG++SK+M     P P  D  +L CGPP M + ++               L+ LGYT EM+F+F
Sbjct:  121 GYNAEGKTKYVIRPYTPISDPEAKGYFDLLIKVYPDGKMSQHFASLKPGDVLEVKGPVEKFKYSPNMKKHIGMIAGGSGITPMLQVIDAIVKNPEDNTQISLLYANVSPDDILLKQKLDVLQANHPN-LKIFYTVDNPTKNWKGGVGYISKDMALKGLPLPTDDTLILVCGPPGMMEHISGGKAPDWSQGEVKGILKELGYTEEMVFKF 328          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_CANGA (NADH-cytochrome b5 reductase 1 OS=Candida glabrata GN=CBR1 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.863e-44
Identity = 83/183 (45.36%), Postives = 126/183 (68.85%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSD-VGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP-ESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 560
            G+ V + YTPT+LD + VG FEL++K YP+G +S H  +M++G+ + + GP+G + Y P   +   M AGG+GITPMFQ+ +AI  +P+DKT+V L+Y NV  EDILLK+ELD    + PDQF I Y+L++P  + W GGVG+V+ ++++   P+   D+Q+L CGPP M  ++  +  ALG+
Sbjct:   87 GKPVSRSYTPTSLDEECVGFFELLVKSYPEGNISKHIGDMKIGEKINISGPRGFYEYVPNVHKHLAMVAGGTGITPMFQIMKAIARDPSDKTRVTLLYGNVLEEDILLKQELDDLVKQRPDQFKITYLLDKPERDDWEGGVGYVTLDLMKESFPSAEEDVQLLVCGPPGMVSSVKRNAVALGF 269          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1_USTMA (NADH-cytochrome b5 reductase 2 OS=Ustilago maydis GN=MCR1 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.589e-44
Identity = 88/208 (42.31%), Postives = 132/208 (63.46%), Query Frame = 3
Query:    6 KDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAP--ASDIQVLRCGPPPMNKAMAAH-------------LEALGYTSEMLFQF 584
            KD QG++VI+PYTP T    VGH + ++K YP G+M+ +   M+ GD L +KGP  +F Y+  +  + GM AGGSGITPM+QV + I  NP+DKTKV LIY+N T +DILL+E+ D  A K  D+FTI Y L++ P+ +NG  G+V++++++ H P P  A   ++  CGPPP  +A++               L  LGY ++ +++F
Sbjct:  144 KDDQGKDVIRPYTPITSPDTVGHMDFLVKKYPGGKMTTYMHSMKPGDKLGIKGPIAKFAYKANEFESIGMIAGGSGITPMYQVIQDIASNPSDKTKVTLIYSNKTEQDILLREQFDQLAKK-DDRFTIIYGLDKLPKGFNGFEGYVTEDLVKKHLPQPELADKAKIFVCGPPPQVEAISGKKGPKGSQGELKGLLAKLGYQADQVYKF 350          
The following BLAST results are available for this feature:
BLAST of EH406255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
NCB5R_LACBS8.035e-5050.27NADH-cytochrome b5 reductase 1 OS=Laccaria bicolor... [more]
NCB5R_NEUCR3.988e-4950.54NADH-cytochrome b5 reductase 1 OS=Neurospora crass... [more]
NCB5R_CRYNE1.515e-4848.40NADH-cytochrome b5 reductase 1 OS=Cryptococcus neo... [more]
NCB5R_MAGGR3.376e-4851.08NADH-cytochrome b5 reductase 1 OS=Magnaporthe gris... [more]
NCB5R_AJECN3.376e-4849.21NADH-cytochrome b5 reductase 1 OS=Ajellomyces caps... [more]
NCB5R_VANPO6.367e-4748.90NADH-cytochrome b5 reductase 1 OS=Vanderwaltozyma ... [more]
NCB5R_ASHGO5.390e-4646.74NADH-cytochrome b5 reductase 1 OS=Ashbya gossypii ... [more]
NCB5R_ARATH7.039e-4644.02NADH-cytochrome b5 reductase-like protein OS=Arabi... [more]
NCB5R_CANGA3.863e-4445.36NADH-cytochrome b5 reductase 1 OS=Candida glabrata... [more]
MCR1_USTMA6.589e-4442.31NADH-cytochrome b5 reductase 2 OS=Ustilago maydis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAB2BC05ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406255 ID=EH406255; Name=EH406255; organism=Citrus clementina; type=EST; length=755bp
GGGGCAAGGATAGTCAGGGTGAAGAGGTTATTAAACCATATACCCCAACC
ACATTGGATTCTGATGTTGGTCATTTTGAATTGGTTATTAAGATGTACCC
CCAAGGAAGGATGTCACACCATTTCCGTGAGATGCGTGTTGGTGATTATC
TTGCCGTGAAGGGACCCAAGGGTCGATTCAGGTATCAACCTGGCCAGGTC
AGAGCATTTGGGATGACTGCAGGAGGTTCTGGCATCACTCCAATGTTCCA
AGTTACTAGAGCCATATTAGAGAACCCAAATGACAAGACAAAGGTGCACC
TCATTTATGCCAATGTTACATATGAGGACATTCTTTTAAAGGAAGAATTG
GATGGATTTGCGGCGAAGTACCCTGATCAATTCACAATCTACTATGTGTT
GAATCAGCCTCCTGAATCGTGGAATGGTGGTGTTGGCTTTGTCTCAAAGG
AAATGATTCAAACCCATTGTCCCGCACCTGCTTCTGATATTCAGGTTCTG
AGATGTGGTCCACCACCAATGAACAAGGCCATGGCTGCTCACCTCGAGGC
ACTTGGATATACTTCAGAAATGCTGTTCCAGTTCTGATCACTTCCATAAG
GTTGTCCAATTATTTGGACTGATATTCGTCACTCCTATTCGGTCCACATA
AAGAACTTTTTTACATCTCTTTTAAGCTGTATTTTGTTTCTCCTGTGACT
AAAGAAGCCGATGAAACCGGAGCATGGATTTTGTAATTGATCTTTTGCTT
TAACC
back to top