EH406255

Overview
NameEH406255
Unique NameEH406255
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15071 contig Ccv1_Contig15071:287..1041. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NB5R1_BOVIN (NADH-cytochrome b5 reductase 1 OS=Bos taurus GN=CYB5R1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.722e-42
Identity = 90/216 (41.67%), Postives = 133/216 (61.57%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQG---------RMSHHFREMRVGDYLAVKGP--------KGRFRYQPGQ--------VRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAH--LEALGYTSEMLFQF 584
            G  VI+PYTP T D D G+ +LVIK+Y +G         +MS +   +++GD +  +GP        KG+F  QP +         R  GM AGG+GITPM Q+ RAIL++P D T+  L++AN T +DI+L+E+L+   A++P +F +++ L+ PPE W    GFVS +MI+ H PAP  D+ +L CGPPPM + +A H  L+ LGY+ +M F +
Sbjct:   91 GSLVIRPYTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLDSLKIGDVVEFRGPSGLLTYAGKGKFNIQPNKKAPPEARVARNLGMIAGGTGITPMLQLIRAILKDPEDPTQCFLLFANQTEKDIILREDLEELQARHPGRFKLWFTLDHPPEGWAYSKGFVSVDMIREHLPAPGEDVLLLLCGPPPMVQ-LACHPSLDKLGYSPKMRFTY 305          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1_ASPOR (NADH-cytochrome b5 reductase 2 OS=Aspergillus oryzae GN=mcr1 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.167e-42
Identity = 79/200 (39.50%), Postives = 126/200 (63.00%), Query Frame = 3
Query:   27 VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQ-VLRCGPPPMNKAMAAH-------------LEALGYTSEMLFQF 584
            V++PYTPT+ +   G+ +LV+K+YP G MS H   M V   L+ KGP  +++++  +     + AGG+GITPM+Q+ R I +NP+DKTKV L+Y NVT +DILLK+EL      YP +F  +Y+L++PP+ W GG G+++KE+++T  P P  + Q +  CGPP +  A++ +             L+ LGY  + +++F
Sbjct:  124 VLRPYTPTSDEDQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLSFKGPLPKYQWETNKHEHIALIAGGTGITPMYQLIRQIFKNPDDKTKVTLVYGNVTEDDILLKKELQDLENTYPQRFKAFYLLDKPPKEWTGGKGYINKELLKTVLPEPKEENQKIFVCGPPGLYNAVSGNKVSPKDQGELSGILKELGYNKDQVYKF 323          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NB5R1_HUMAN (NADH-cytochrome b5 reductase 1 OS=Homo sapiens GN=CYB5R1 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.054e-42
Identity = 89/215 (41.40%), Postives = 130/215 (60.47%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQG---------RMSHHFREMRVGDYLAVKGP--------KGRFRYQPGQ--------VRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPM-NKAMAAHLEALGYTSEMLFQF 584
            G  VI+PYTP T D D G+ +LVIK+Y +G         +MS +   ++VGD +  +GP        KG F  QP +         +  GM AGG+GITPM Q+ RAIL+ P D T+  L++AN T +DI+L+E+L+   A+YP++F +++ L+ PP+ W    GFV+ +MI+ H PAP  D+ VL CGPPPM   A   +L+ LGY+ +M F +
Sbjct:   91 GSLVIRPYTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTGKGHFNIQPNKKSPPEPRVAKKLGMIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKDIILREDLEELQARYPNRFKLWFTLDHPPKDWAYSKGFVTADMIREHLPAPGDDVLVLLCGPPPMVQLACHPNLDKLGYSQKMRFTY 305          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1_ASPCL (NADH-cytochrome b5 reductase 2 OS=Aspergillus clavatus GN=mcr1 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.054e-42
Identity = 83/207 (40.10%), Postives = 127/207 (61.35%), Query Frame = 3
Query:    6 KDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAP-ASDIQVLRCGPPPMNKAMAAH-------------LEALGYTSEMLFQF 584
            K ++G+ VI+PYTP + +   G+ +LV+K+YP G MS H   M V   L  KGP  ++ ++  + +   + AGG+GITPM+Q+ R I +NP D+TKV L++ NV+ EDILLK+EL      +P +F  +YVL+ PP+ W GG G+V+KE+++T  P P   DI++  CGPP M KA++               L  LGY  + +++F
Sbjct:  116 KPAEGKPVIRPYTPVSDEDQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPIPKYPWETNKHKHICLIAGGTGITPMYQLARQIFKNPEDQTKVTLVFGNVSEEDILLKKELQELENTHPRRFKAFYVLDNPPKEWTGGKGYVTKELLKTVLPEPKEEDIKIFVCGPPGMYKAISGPKVSPKDQGELTGLLAELGYNKDQVYKF 322          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1_COCIM (NADH-cytochrome b5 reductase 2 OS=Coccidioides immitis GN=MCR1 PE=3 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.052e-41
Identity = 83/199 (41.71%), Postives = 123/199 (61.81%), Query Frame = 3
Query:   30 IKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASD-IQVLRCGPPPMNKAMAAH-------------LEALGYTSEMLFQF 584
            I+PYTP + +   G+ +LV+K YP G MS H   M VG  L+ KGP  ++ ++  +     M AGG+GITPM+Q+ R I  NPNDKTKV L++ N+T EDILLK+ELD     YP +F  +Y+L++PP  W  G G+V+KE+++T  P P ++ I++  CGPP M KA++               L+ LGY  + +++F
Sbjct:  127 IRPYTPVSEEEQPGYLDLVVKQYPNGPMSTHLHNMAVGQQLSFKGPIPKYPWEQNKHDHICMIAGGTGITPMYQIIRKIFNNPNDKTKVTLVFGNITEEDILLKKELDILENTYPRRFRAFYLLDKPPAGWTQGTGYVTKELLKTVLPEPKTENIKIFVCGPPGMYKAVSGPKNSPKDQGELTGLLKELGYDKDQVYKF 325          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1_YEAS7 (NADH-cytochrome b5 reductase 2 OS=Saccharomyces cerevisiae (strain YJM789) GN=MCR1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.818e-41
Identity = 79/205 (38.54%), Postives = 124/205 (60.49%), Query Frame = 3
Query:   15 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLN--QPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAH-------------LEALGYTSEMLFQF 584
            +G  V++PYTP +  S  GHF+LV+K Y  G+M+ H   ++  D ++ KGP  ++++QP Q ++  +   G+GI P++Q+   I+ENPNDKTKV+L+Y N T +DILL++ELD    KYPD+F + Y ++  Q  + ++G +GF+SK+ IQ H P P     +  CGPPP   A +               L  LGY+ + +F+F
Sbjct:   98 KGSNVVRPYTPVSDLSQKGHFQLVVKHYEGGKMTSHLFGLKPNDTVSFKGPIMKWKWQPNQFKSITLLGAGTGINPLYQLAHHIVENPNDKTKVNLLYGNKTPQDILLRKELDALKEKYPDKFNVTYFVDDKQDDQDFDGEIGFISKDFIQEHVPGPKESTHLFVCGPPPFMNAYSGEKKSPKDQGELIGILNNLGYSKDQVFKF 302          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1A_VANPO (NADH-cytochrome b5 reductase 2-A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=MCR1A PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.818e-41
Identity = 80/203 (39.41%), Postives = 121/203 (59.61%), Query Frame = 3
Query:   15 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKA-------------MAAHLEALGYTSEMLFQF 584
            +G  VI+PYTP +   + G  +LVIK YP G+M++H   ++V D L+ KGP  ++++ P    +  +  GG+GITP++Q+  AI +NPNDKTK+ L Y+N T +D+L+K+ELD   AKYPDQ  I Y +  P + + G  GF+SKE I ++   P+    V  CGPPP   A             +   L+ LGYT + +++F
Sbjct:   94 KGSNVIRPYTPVSDVDEKGSLDLVIKHYPDGKMTNHIFSLKVNDTLSFKGPIPKWKWVPNSFESITLIGGGTGITPLYQLIHAITKNPNDKTKIRLFYSNKTSQDVLMKKELDELQAKYPDQLRITYFITTPDKGYKGESGFISKEFIASNADKPSPKSHVFVCGPPPFMNAYSGDKKSPTDQGELVGILKELGYTIDQVYKF 296          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_YEAS7 (NADH-cytochrome b5 reductase 1 OS=Saccharomyces cerevisiae (strain YJM789) GN=CBR1 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 8.905e-41
Identity = 81/184 (44.02%), Postives = 120/184 (65.22%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDV-GHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP-ESWNGGVGFVSKEMIQTHCPAPASD-IQVLRCGPPPMNKAMAAHLEALGY 560
            G+++ + YTPT+LD D  G+FEL++K YP G +S    E+++GD + +KGP+G + Y+       GM AGG+GI PM+Q+ +AI  + +D TKV L++ NV  EDILLK+EL+   A  P QF I Y L+ P  E W GGVG+++K++I+ H PA   D +Q+L CGPP M  ++      LG+
Sbjct:   85 GKDITRSYTPTSLDGDTKGNFELLVKSYPTGNVSKMIGELKIGDSIQIKGPRGNYHYERNCRSHLGMIAGGTGIAPMYQIMKAIAMDSHDTTKVSLVFGNVHEEDILLKKELEALVAMKPSQFKIVYYLDSPDREDWAGGVGYITKDVIKEHLPAATVDNVQILICGPPAMVASVRRSTVDLGF 268          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1_PICST (NADH-cytochrome b5 reductase 2 OS=Pichia stipitis GN=MCR1 PE=3 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.163e-40
Identity = 78/203 (38.42%), Postives = 122/203 (60.10%), Query Frame = 3
Query:   15 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKA-------------MAAHLEALGYTSEMLFQF 584
            +G  VI+PYTP +     G  + V+K Y  G+MS H  +++  D L+ KGP  +++++P Q ++  +  GG+GITP++Q+   I +NP DKT+V L Y + T +DIL+K+ELD  AAK+ DQ  I Y +++   SW G  G++SKE +Q + PAP  D ++  CGPPP+ KA             +   L  LG++ E +F+F
Sbjct:   96 KGSNVIRPYTPVSDTEQAGTIDFVVKKYEGGKMSSHIHDLKPNDTLSFKGPFVKWKWEPNQFKSIALIGGGTGITPLYQLIHEITKNPADKTQVSLFYGSQTPDDILIKKELDALAAKHKDQVKIVYFVDKADASWKGETGYISKEFLQKNLPAPGPDNKIFVCGPPPLYKAVSGPKVSPTDQGELTGSLAELGFSKENVFKF 298          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1_PICGU (NADH-cytochrome b5 reductase 2 OS=Pichia guilliermondii GN=MCR1 PE=3 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.163e-40
Identity = 80/204 (39.22%), Postives = 124/204 (60.78%), Query Frame = 3
Query:   12 SQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMA-------------AHLEALGYTSEMLFQF 584
            ++G  VI+PYTP +     G  + VIK Y  G+MS HF  ++ GD ++ KGP  +++++P Q ++  +  GG+GITP++Q+   I +NP DKTKV L Y N+T EDIL+K+ELD  A K+ DQ +I Y +++   +W G  G + KE +Q++ P P+ D +V  CGPP + KA++               L  LGYT E +++F
Sbjct:   91 AKGNNVIRPYTPVSDVDQKGTIDFVIKKYDGGKMSTHFHGLKEGDTVSFKGPIVKWKWEPNQFQSIALIGGGTGITPLYQLLHEITKNPEDKTKVKLFYGNLTEEDILIKKELDDIAEKHKDQVSITYFVDKASANWKGETGHIDKEFLQSNLPGPSKDSKVFVCGPPGLYKALSGVKVSPTDQGEVTGVLAELGYTKENVYKF 294          
The following BLAST results are available for this feature:
BLAST of EH406255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
NB5R1_BOVIN4.722e-4241.67NADH-cytochrome b5 reductase 1 OS=Bos taurus GN=CY... [more]
MCR1_ASPOR6.167e-4239.50NADH-cytochrome b5 reductase 2 OS=Aspergillus oryz... [more]
NB5R1_HUMAN8.054e-4241.40NADH-cytochrome b5 reductase 1 OS=Homo sapiens GN=... [more]
MCR1_ASPCL8.054e-4240.10NADH-cytochrome b5 reductase 2 OS=Aspergillus clav... [more]
MCR1_COCIM1.052e-4141.71NADH-cytochrome b5 reductase 2 OS=Coccidioides imm... [more]
MCR1_YEAS76.818e-4138.54NADH-cytochrome b5 reductase 2 OS=Saccharomyces ce... [more]
MCR1A_VANPO6.818e-4139.41NADH-cytochrome b5 reductase 2-A OS=Vanderwaltozym... [more]
NCB5R_YEAS78.905e-4144.02NADH-cytochrome b5 reductase 1 OS=Saccharomyces ce... [more]
MCR1_PICST1.163e-4038.42NADH-cytochrome b5 reductase 2 OS=Pichia stipitis ... [more]
MCR1_PICGU1.163e-4039.22NADH-cytochrome b5 reductase 2 OS=Pichia guillierm... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAB2BC05ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406255 ID=EH406255; Name=EH406255; organism=Citrus clementina; type=EST; length=755bp
GGGGCAAGGATAGTCAGGGTGAAGAGGTTATTAAACCATATACCCCAACC
ACATTGGATTCTGATGTTGGTCATTTTGAATTGGTTATTAAGATGTACCC
CCAAGGAAGGATGTCACACCATTTCCGTGAGATGCGTGTTGGTGATTATC
TTGCCGTGAAGGGACCCAAGGGTCGATTCAGGTATCAACCTGGCCAGGTC
AGAGCATTTGGGATGACTGCAGGAGGTTCTGGCATCACTCCAATGTTCCA
AGTTACTAGAGCCATATTAGAGAACCCAAATGACAAGACAAAGGTGCACC
TCATTTATGCCAATGTTACATATGAGGACATTCTTTTAAAGGAAGAATTG
GATGGATTTGCGGCGAAGTACCCTGATCAATTCACAATCTACTATGTGTT
GAATCAGCCTCCTGAATCGTGGAATGGTGGTGTTGGCTTTGTCTCAAAGG
AAATGATTCAAACCCATTGTCCCGCACCTGCTTCTGATATTCAGGTTCTG
AGATGTGGTCCACCACCAATGAACAAGGCCATGGCTGCTCACCTCGAGGC
ACTTGGATATACTTCAGAAATGCTGTTCCAGTTCTGATCACTTCCATAAG
GTTGTCCAATTATTTGGACTGATATTCGTCACTCCTATTCGGTCCACATA
AAGAACTTTTTTACATCTCTTTTAAGCTGTATTTTGTTTCTCCTGTGACT
AAAGAAGCCGATGAAACCGGAGCATGGATTTTGTAATTGATCTTTTGCTT
TAACC
back to top