EH406255

Overview
NameEH406255
Unique NameEH406255
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15071 contig Ccv1_Contig15071:287..1041. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1_CHAGB (NADH-cytochrome b5 reductase 2 OS=Chaetomium globosum GN=MCR1 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.193e-39
Identity = 82/200 (41.00%), Postives = 122/200 (61.00%), Query Frame = 3
Query:   27 VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASD-IQVLRCGPPPMNKAMAAH-------------LEALGYTSEMLFQF 584
            VI+PYTPT  +   G+ +L++K YP G MS H  +M  G  L VKGP  ++ +   +     + AGG+GITPMFQ+ RAI  NP+D+TKV L++ NV  +DILLK+EL       P +F  +YVL+ PP+ W GG GF++K++++T  P P  + I+V  CGPP M  A++ +             L+ LGY+ E +++F
Sbjct:  149 VIRPYTPTNDEDARGYLDLLVKKYPNGPMSTHLHDMVPGQRLDVKGPLPKYPWTANKHGHIALVAGGTGITPMFQLCRAIFNNPDDQTKVTLVFGNVREDDILLKKELAALENNNPRRFRAFYVLDDPPKHWTGGKGFITKDLLKTVLPEPKDENIKVFVCGPPGMMDAISGNKKSPKDQGELKGILKELGYSPEQVYKF 348          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NB5R2_XENTR (NADH-cytochrome b5 reductase 2 OS=Xenopus tropicalis GN=cyb5r2 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.865e-39
Identity = 84/215 (39.07%), Postives = 126/215 (58.60%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGP--------KGRFRYQPGQ--------VRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGYTSEMLFQF 584
            G  V++ YTP + D   GH +L++K+Y +         G+MS H   +++G+ +  +GP        KG+F  +P +         +  GM AGG+GITPM Q+ R I ++PND TK  LI+AN T +DILL+ EL+  A  +P+QF ++Y L++PP+ W  G GFV+ +MI+ H P P+ D+ VL CGPPPM + A   +L  LGY     F +
Sbjct:   90 GSLVVRAYTPVSSDEVKGHVDLIVKVYYKNVHPKFPEGGKMSQHLDSLKIGETIDFRGPNGLLVYKEKGKFAIRPDKKSEPKLKVAKHVGMLAGGTGITPMLQLIRQITQDPNDNTKCSLIFANQTEDDILLRYELETVAKSHPEQFKLWYTLDRPPQGWKYGAGFVTADMIKEHLPPPSEDVVVLMCGPPPMIQFACQDNLTKLGYPEAGRFAY 304          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1_LODEL (NADH-cytochrome b5 reductase 2 OS=Lodderomyces elongisporus GN=MCR1 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.886e-39
Identity = 76/205 (37.07%), Postives = 123/205 (60.00%), Query Frame = 3
Query:   15 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVL--NQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMA-------------AHLEALGYTSEMLFQF 584
            +G  VI+PYTP +     G  + VIK Y  G+MS+H   ++ G+ L+ KGP  +++++P Q ++  +  GG+GITP++Q+ R I  NP DKTKV LIY N + ED+L+K+ +D  AAK+ DQ  + Y +  N+  + W G VGF++KE ++     P+ D ++  CGPP + KA++               L+ LG++ E +F+F
Sbjct:   96 KGNNVIRPYTPVSDPDQKGTLDFVIKRYENGKMSNHIHNLKEGETLSFKGPVVKWKWEPNQFKSIALIGGGTGITPLYQLLREITSNPEDKTKVSLIYGNTSPEDVLIKDRIDDIAAKHKDQVKVTYFVDENKATKDWEGEVGFITKEFLEKELDKPSPDFKIFVCGPPGLYKAISGVKVSPTDQGEVEGALKDLGFSKEHVFKF 300          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NB5R3_PIG (NADH-cytochrome b5 reductase 3 (Fragment) OS=Sus scrofa GN=CYB5R3 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.089e-38
Identity = 86/215 (40.00%), Postives = 129/215 (60.00%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGP--------KGRFRYQPGQ--------VRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPM-NKAMAAHLEALGYTSEMLFQF 584
            G  VI+PYTP + D D G  +LVIK+Y +         G+MS +   M++GD +  +GP        KG+F  +P +        V++ GM AGG+GITPM QV RAI+++P+D T  HL++AN T +DILL+ EL+    ++  +F ++Y +++ PE+W+   GFV++EMI+ H P P  +  VL CGPPPM   A   +LE +G+  E  F F
Sbjct:   58 GNLVIRPYTPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSSPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNEHSARFKLWYTVDRAPEAWDYSQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLERVGHPKERCFAF 272          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: YMI7_YEAST (Uncharacterized oxidoreductase YML087C OS=Saccharomyces cerevisiae GN=YML087C PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.422e-38
Identity = 74/183 (40.44%), Postives = 116/183 (63.39%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGYTS 566
            GE +++ YTP  + +  GH ELV+K Y  G +S +F ++++  Y+  KGP G   Y        G+ AGGSGITP+ QV + I+ +P D T + LIYAN T +DIL+K +LD  A +YP  F ++YV+++P   WNG VG+V+ E ++ + P  A D ++L CGPP MN+ +  + + LG+++
Sbjct:  117 GERLVRYYTPVNVPNTEGHLELVVKTYKHGVVSKYFDKLKIRQYVEFKGPLGELEYDQDTATELGIIAGGSGITPVLQVLQEIIPSPEDLTHISLIYANETEDDILMKSQLDHMAKEYP-HFKVHYVIHKPNGKWNGDVGYVTLEEMKRYLPKQAEDHRLLICGPPKMNEMVLNYAKELGWSN 298          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NB5R3_MACFA (NADH-cytochrome b5 reductase 3 OS=Macaca fascicularis GN=CYB5R3 PE=2 SV=3)

HSP 1 Score: 159.844 bits (403), Expect = 1.422e-38
Identity = 86/215 (40.00%), Postives = 129/215 (60.00%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGP--------KGRFRYQPGQ--------VRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPM-NKAMAAHLEALGYTSEMLFQF 584
            G  VI+PYTP + D D G  +LVIK+Y +         G+MS +   M++GD +  +GP        KG+F  +P +        V++ GM AGG+GITPM QV RAI+++P+D T  HL++AN T +DILL+ EL+    ++  +F ++Y L++ PE+W+   GFV++EMI+ H P P  +  VL CGPPPM   A   +L+ +G+  E  F F
Sbjct:   87 GNLVIRPYTPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSNPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNEHSARFKLWYTLDRAPEAWDYSQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDRVGHPKERCFAF 301          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NB5R2_MOUSE (NADH-cytochrome b5 reductase 2 OS=Mus musculus GN=Cyb5r2 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.857e-38
Identity = 88/213 (41.31%), Postives = 127/213 (59.62%), Query Frame = 3
Query:   21 EEVIKPYTPTTLDSDVGHFELVIKMY--------PQG-RMSHHFREMRVGDYLAVKGPKGRFRY-QPGQ---------------VRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAH--LEALGYTSEMLF 578
            E VI+ YTP + D D G  +L+IK+Y        P+G +M+ +   M++GD +  +GP GR  Y +PG                V   GM AGG+GITPM Q+ R I ++ +D+T++ L++AN T EDILL++EL+  A  +  QF ++Y L++PP  W    GFVS +MI+ H P P  D  +L CGPPP+ +A AAH  LE L YT +M+F
Sbjct:   63 ELVIRAYTPVSSDDDQGFVDLIIKIYFKNVHPKYPEGGKMTQYLENMKIGDTILFRGPTGRLFYNEPGTLLIKANKTSEPEKKLVHHLGMIAGGTGITPMLQLIRHITKDTSDETRMSLLFANQTEEDILLRKELEEVATTHHKQFNLWYTLDRPPSDWKYSSGFVSADMIKEHLPPPGEDTLILVCGPPPLIQA-AAHPSLEQLSYTKDMIF 274          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NB5R3_BOVIN (NADH-cytochrome b5 reductase 3 OS=Bos taurus GN=CYB5R3 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.425e-38
Identity = 85/215 (39.53%), Postives = 129/215 (60.00%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGP--------KGRFRYQPGQ--------VRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPM-NKAMAAHLEALGYTSEMLFQF 584
            G  VI+PYTP + D D G  +LVIK+Y +         G+MS +   M++GD +  +GP        KG+F  +P +        V++ GM AGG+GITPM QV RAI+++P+D T  HL++AN T +DILL+ EL+    ++  +F ++Y +++ PE+W+   GFV++EMI+ H P P  +  VL CGPPPM   A   +L+ +G+  E  F F
Sbjct:   86 GNLVIRPYTPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSDPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNEHSARFKLWYTVDKAPEAWDYSQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDRVGHPKERCFAF 300          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1_NEUCR (NADH-cytochrome b5 reductase 2 OS=Neurospora crassa GN=mcr-1 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.425e-38
Identity = 75/200 (37.50%), Postives = 125/200 (62.50%), Query Frame = 3
Query:   27 VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPAS-DIQVLRCGPPPMNKAMAAH-------------LEALGYTSEMLFQF 584
            V++PYTP + +S  G+ +L++K Y  G MS +  +M  G  L +KGP  ++ ++  + +   + AGG+GITPM+Q+ RAI  NP+DKTKV L++ NV+ ED+LLK EL      YP +F  +YVL+ PP+ W G  G+++K++++T  P P + DI++  CGPP M  +++ +             L+ LGY+ + +++F
Sbjct:  144 VLRPYTPISDESAQGYIDLLVKKYEGGPMSTYLHDMAPGQRLDIKGPLPKYPWEANKHKHIALVAGGTGITPMYQLIRAIFNNPDDKTKVTLVFGNVSEEDVLLKHELATIENHYPQRFRAFYVLDNPPKEWAGNKGYINKDLLKTVLPEPKNEDIKIFVCGPPGMMNSISGNKKSPRDQGELTGILKELGYSPDQVYKF 343          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NB5R3_CANFA (NADH-cytochrome b5 reductase 3 OS=Canis familiaris GN=CYB5R3 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.167e-38
Identity = 84/215 (39.07%), Postives = 129/215 (60.00%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGP--------KGRFRYQPGQ--------VRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPM-NKAMAAHLEALGYTSEMLFQF 584
            G  VI+PYTP + D D G  +LVIK+Y +         G+MS +   M++GD +  +GP        KG+F  +P +        V++ GM AGG+GITPM QV RAI+++P+D T  HL++AN T +DILL+ EL+    ++  +F ++Y +++ PE+W+   GFV++EMI+ H P P  +  +L CGPPPM   A   +L+ +G+  E  F F
Sbjct:   87 GNLVIRPYTPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSNPIIKTVKSVGMIAGGTGITPMLQVIRAIIKDPHDPTVCHLLFANQTEKDILLRPELEELRNEHSARFKLWYTVDKAPEAWDYSQGFVNEEMIRDHLPPPEEEPLILMCGPPPMIQYACLPNLDRVGHPKERCFAF 301          
The following BLAST results are available for this feature:
BLAST of EH406255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
MCR1_CHAGB2.193e-3941.00NADH-cytochrome b5 reductase 2 OS=Chaetomium globo... [more]
NB5R2_XENTR2.865e-3939.07NADH-cytochrome b5 reductase 2 OS=Xenopus tropical... [more]
MCR1_LODEL4.886e-3937.07NADH-cytochrome b5 reductase 2 OS=Lodderomyces elo... [more]
NB5R3_PIG1.089e-3840.00NADH-cytochrome b5 reductase 3 (Fragment) OS=Sus s... [more]
YMI7_YEAST1.422e-3840.44Uncharacterized oxidoreductase YML087C OS=Saccharo... [more]
NB5R3_MACFA1.422e-3840.00NADH-cytochrome b5 reductase 3 OS=Macaca fascicula... [more]
NB5R2_MOUSE1.857e-3841.31NADH-cytochrome b5 reductase 2 OS=Mus musculus GN=... [more]
NB5R3_BOVIN2.425e-3839.53NADH-cytochrome b5 reductase 3 OS=Bos taurus GN=CY... [more]
MCR1_NEUCR2.425e-3837.50NADH-cytochrome b5 reductase 2 OS=Neurospora crass... [more]
NB5R3_CANFA3.167e-3839.07NADH-cytochrome b5 reductase 3 OS=Canis familiaris... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2BC05ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406255 ID=EH406255; Name=EH406255; organism=Citrus clementina; type=EST; length=755bp
GGGGCAAGGATAGTCAGGGTGAAGAGGTTATTAAACCATATACCCCAACC
ACATTGGATTCTGATGTTGGTCATTTTGAATTGGTTATTAAGATGTACCC
CCAAGGAAGGATGTCACACCATTTCCGTGAGATGCGTGTTGGTGATTATC
TTGCCGTGAAGGGACCCAAGGGTCGATTCAGGTATCAACCTGGCCAGGTC
AGAGCATTTGGGATGACTGCAGGAGGTTCTGGCATCACTCCAATGTTCCA
AGTTACTAGAGCCATATTAGAGAACCCAAATGACAAGACAAAGGTGCACC
TCATTTATGCCAATGTTACATATGAGGACATTCTTTTAAAGGAAGAATTG
GATGGATTTGCGGCGAAGTACCCTGATCAATTCACAATCTACTATGTGTT
GAATCAGCCTCCTGAATCGTGGAATGGTGGTGTTGGCTTTGTCTCAAAGG
AAATGATTCAAACCCATTGTCCCGCACCTGCTTCTGATATTCAGGTTCTG
AGATGTGGTCCACCACCAATGAACAAGGCCATGGCTGCTCACCTCGAGGC
ACTTGGATATACTTCAGAAATGCTGTTCCAGTTCTGATCACTTCCATAAG
GTTGTCCAATTATTTGGACTGATATTCGTCACTCCTATTCGGTCCACATA
AAGAACTTTTTTACATCTCTTTTAAGCTGTATTTTGTTTCTCCTGTGACT
AAAGAAGCCGATGAAACCGGAGCATGGATTTTGTAATTGATCTTTTGCTT
TAACC
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