EH406255

Overview
NameEH406255
Unique NameEH406255
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15071 contig Ccv1_Contig15071:287..1041. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1_MAGGR (NADH-cytochrome b5 reductase 2 OS=Magnaporthe grisea GN=MCR1 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.402e-38
Identity = 78/200 (39.00%), Postives = 120/200 (60.00%), Query Frame = 3
Query:   27 VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASD-IQVLRCGPPPMNKAMAAH-------------LEALGYTSEMLFQF 584
            V++PYTP + +   G+ +L++K Y  G MS H  E+  G  L  KGP  ++ +   +     M AGG+GITPM+Q+ RAI +NP DKTKV L+  N+T EDILLK++L      YP +F  +YVL+ PP+ W G  G+++K++++T  P P  + I+V  CGPP M KA++ +             L+ LGY  + +++F
Sbjct:  132 VLRPYTPISDEDQKGYLDLIVKKYEGGPMSTHIHELVPGQKLDFKGPLPKYEWSANKHPHVAMIAGGTGITPMYQIMRAIFKNPADKTKVTLVVGNITEEDILLKKQLAELENTYPQRFRAFYVLDNPPKDWAGTKGYITKDLLKTVLPEPKEENIKVFVCGPPGMMKAISGNKVSPKDQGEVSGILKELGYKQDQIYKF 331          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NB5R2_RAT (NADH-cytochrome b5 reductase 2 OS=Rattus norvegicus GN=Cyb5r2 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.572e-37
Identity = 83/214 (38.79%), Postives = 126/214 (58.88%), Query Frame = 3
Query:   21 EEVIKPYTPTTLDSDVGHFELVIKMY--------PQG-RMSHHFREMRVGDYLAVKGPKGRFRY-QPGQ---------------VRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPM-NKAMAAHLEALGYTSEMLFQF 584
            E VI+ YTP + D D G  +L+IK+Y        P+G +M+ +   M++GD +  +GP GR  Y +PG                V   GM AGG+GITPM Q+ R I ++ +D T++ L++AN T EDILL++EL+  A  + +QF+++Y L++PP  W    GF++ +MI+ H P P     +L CGPPP+  +A    LE LGYT +M+F +
Sbjct:   63 ELVIRAYTPVSSDDDQGFVDLIIKIYFKNVHPKYPEGGKMTQYLENMKIGDTILFRGPTGRLFYNEPGTLLIKTDKTSEPEKKLVHHLGMIAGGTGITPMLQLIRHITKDTSDGTRMSLLFANQTEEDILLRKELEEVATTHQNQFSLWYTLDRPPSGWEYSSGFITADMIKEHLPPPGEATLILVCGPPPLIQEAAHPSLEQLGYTKDMIFTY 276          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NB5R3_RAT (NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus GN=Cyb5r3 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.681e-37
Identity = 81/215 (37.67%), Postives = 125/215 (58.14%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRYQPG----------------QVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGYTSEMLFQF 584
            G  VI+PYTP + D D G  +LV+K+Y +         G+MS +   M +GD +  +GP G   YQ                   V++ GM AGG+GITPM QV RA+L++PND T  +L++AN + +DILL+ EL+    ++  +F ++Y +++ P++W+   GFV++EMI+ H P P  +  +L CGPPPM + A   +LE +G+  E  F F
Sbjct:   87 GNLVIRPYTPVSSDDDKGFVDLVVKVYFKDTHPKFPAGGKMSQYLENMNIGDTIEFRGPNGLLVYQGKGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFANQSEKDILLRPELEELRNEHSSRFKLWYTVDKAPDAWDYSQGFVNEEMIRDHLPPPGEETLILMCGPPPMIQFACLPNLERVGHPKERCFTF 301          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NB5R3_MOUSE (NADH-cytochrome b5 reductase 3 OS=Mus musculus GN=Cyb5r3 PE=1 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 3.502e-37
Identity = 81/215 (37.67%), Postives = 126/215 (58.60%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRYQPG----------------QVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGYTSEMLFQF 584
            G  VI+PYTP + D D G  +LV+K+Y +         G+MS +   M++GD +  +GP G   YQ                   V++ GM AGG+GITPM QV RA+L++PND T  +L++AN + +DILL+ EL+    ++  +F ++Y +++ P++W+   GFV++EMI+ H P P  +  +L CGPPPM + A   +LE +G+  E  F F
Sbjct:   87 GNLVIRPYTPVSSDDDKGFVDLVVKVYFKDTHPKFPAGGKMSQYLENMKIGDTIEFRGPNGLLVYQGKGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFANQSEKDILLRPELEELRNEHSARFKLWYTVDKAPDAWDYSQGFVNEEMIRDHLPTPGEEPLILMCGPPPMIQFACLPNLERVGHPKERCFTF 301          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1_ASHGO (NADH-cytochrome b5 reductase 2 OS=Ashbya gossypii GN=MCR1 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.502e-37
Identity = 75/203 (36.95%), Postives = 118/203 (58.13%), Query Frame = 3
Query:   15 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAH-------------LEALGYTSEMLFQF 584
            +G  VI+PYTP + +   G F+LVIK Y  G+ + H   ++  D +  KGP  ++R+ P    +  +   G+GITP+FQ+   I ENP D TKVHL+Y N T +DILL++EL+  A+KYPDQ  + Y +++P   + G  GF++K+ ++ + P P S+  +  CGPPP   A + +             L  LGYT + +++F
Sbjct:  104 KGSNVIRPYTPVSDNMARGMFQLVIKHYDGGKFTTHLFGLKENDTVEFKGPIQKWRWDPNMFDSIVLMGAGTGITPLFQMMHHIAENPTDNTKVHLLYGNKTPQDILLRKELEELASKYPDQVKVTYFVDKPEGDYKGEKGFITKDFLKQNLPTPGSNSHIFVCGPPPFMDAFSGNKVSPSDQGQVTGVLSELGYTKDHVYKF 306          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NIA_LOTJA (Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.801e-37
Identity = 82/201 (40.80%), Postives = 121/201 (60.20%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQG---------RMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGY 560
            G+  ++ YTPT+   +VG+FELV+K+Y +G          MS H   + +G  L VKGP G   Y          +    +   M AGG+GITP++QV +AIL++P D TK++++YAN T +DILL+EELD +A KY D+F ++YV+    E W   VGFV++ +++ H P    D   L CGPPPM + A+  +LE +GY
Sbjct:  691 GKLCMRAYTPTSGVDEVGYFELVVKVYFKGVHPKFPNGGAMSQHLDSLPIGSDLDVKGPLGHIEYTGRGNFLVHGKHRFAKKLAMLAGGTGITPIYQVAQAILKDPEDHTKMYVVYANRTEDDILLREELDTWAKKYEDRFKVWYVVETAKEGWGYSVGFVTEGVMREHLPEAGDDALALACGPPPMIQFAVNPNLEKMGY 891          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NB5R2_CHICK (NADH-cytochrome b5 reductase 2 OS=Gallus gallus GN=CYB5R2 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.801e-37
Identity = 80/215 (37.21%), Postives = 120/215 (55.81%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRY----------------QPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGYTSEMLFQF 584
            G  VI+ YTP + D   G+ +L+IK+Y +         G+MS +   M++GD +  +GP G   Y                Q    +  G+ AGG+GITPM Q+ R I  +P D TK +L++AN T +DILL+ EL+  A ++PDQ  ++Y L++PP+ W    GFV+ +MI+TH P P  +  +L CGPPPM + A   +L+ LGY     F +
Sbjct:   90 GNLVIRAYTPVSSDETKGYVDLIIKVYYKNVNPKFPEGGKMSQYLDSMKIGDVIDFRGPNGLLVYKGSGTFMIKPDKKSEAQRKFAKHLGVIAGGTGITPMLQLIRHITSDPKDSTKCYLLFANQTEKDILLRAELEDIAKRHPDQVRLWYTLDRPPQDWKYSSGFVTADMIKTHLPPPGGETLILMCGPPPMIQFACQPNLDKLGYPKSSTFSY 304          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NIA1_MAIZE (Nitrate reductase [NADH] (Fragment) OS=Zea mays PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.738e-36
Identity = 79/206 (38.35%), Postives = 125/206 (60.68%), Query Frame = 3
Query:   15 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAIL-ENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQ---PPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGY 560
            +G+  ++ YTPT++  ++GHF+L++K+Y +         G M+ +   + VG Y+ VKGP G   Y          +        M  GGSGITPM+Q+ +A+L + P D T++HL+YAN T +DILL++ELD +AA+YPD+  ++YV++Q   P E W   VGFV++ +++ H P    D   L CGPPPM + A++ +LE + Y
Sbjct:  407 EGKLCMRAYTPTSMVDEIGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTGRGSFVINGKQRHASRLAMICGGSGITPMYQIIQAVLRDQPEDHTEMHLVYANRTEDDILLRDELDRWAAEYPDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVLREHVPEGGDDTLALACGPPPMIQFAISPNLEKMKY 612          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NIA1_HORVU (Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.872e-36
Identity = 80/206 (38.83%), Postives = 128/206 (62.14%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGD-YLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAIL-ENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQ---PPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGY 560
            G+  ++ YTPT++  ++G FEL++K+Y +         G M+ +   ++VG  Y+ VKGP G   Y          +  + R   M  GGSGITPM+QV +A+L + P D+T++HL+YAN + +DILL++ELD +AA+YPD+  ++YV++Q   P + W   VGFV++++++ H P    D   L CGPPPM K A++ +LE + Y
Sbjct:  701 GKLCMRAYTPTSMVDEIGQFELLVKVYFRDEHPKFPNGGLMTQYLESLQVGSSYIDVKGPLGHVEYTGRGNFVINGKQRRARRLAMICGGSGITPMYQVIQAVLRDQPEDETEMHLVYANRSEDDILLRDELDRWAAEYPDRLKVWYVIDQVKRPEDGWKFSVGFVTEDILRAHVPEGGDDTLALACGPPPMIKFAISPNLEKMKY 906          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: YMM5_YEAST (Uncharacterized oxidoreductase YML125C OS=Saccharomyces cerevisiae GN=YML125C PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.604e-36
Identity = 71/181 (39.23%), Postives = 110/181 (60.77%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 560
            G++ ++ Y P +   + G+ +LV+K Y  G++S +F  +  GD +  KGP G   Y+P   +  G+ AGGSGITP+ Q+   I+  P D TKV L+YAN T  DILLK+ELD  A KYP  F ++YV++ P + W G VG+++K+ +  + P  + D ++L CGP  MN     + + LG+
Sbjct:  117 GKQEVRYYNPISSKLESGYLDLVVKAYVDGKVSKYFAGLNSGDTVDFKGPIGTLNYEPNSSKHLGIVAGGSGITPVLQILNEIITVPEDLTKVSLLYANETENDILLKDELDEMAEKYP-HFQVHYVVHYPSDRWTGDVGYITKDQMNRYLPEYSEDNRLLICGPDGMNNLALQYAKELGW 296          
The following BLAST results are available for this feature:
BLAST of EH406255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
MCR1_MAGGR5.402e-3839.00NADH-cytochrome b5 reductase 2 OS=Magnaporthe gris... [more]
NB5R2_RAT1.572e-3738.79NADH-cytochrome b5 reductase 2 OS=Rattus norvegicu... [more]
NB5R3_RAT2.681e-3737.67NADH-cytochrome b5 reductase 3 OS=Rattus norvegicu... [more]
NB5R3_MOUSE3.502e-3737.67NADH-cytochrome b5 reductase 3 OS=Mus musculus GN=... [more]
MCR1_ASHGO3.502e-3736.95NADH-cytochrome b5 reductase 2 OS=Ashbya gossypii ... [more]
NIA_LOTJA7.801e-3740.80Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA... [more]
NB5R2_CHICK7.801e-3737.21NADH-cytochrome b5 reductase 2 OS=Gallus gallus GN... [more]
NIA1_MAIZE1.738e-3638.35Nitrate reductase [NADH] (Fragment) OS=Zea mays PE... [more]
NIA1_HORVU3.872e-3638.83Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 S... [more]
YMM5_YEAST6.604e-3639.23Uncharacterized oxidoreductase YML125C OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2BC05ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406255 ID=EH406255; Name=EH406255; organism=Citrus clementina; type=EST; length=755bp
GGGGCAAGGATAGTCAGGGTGAAGAGGTTATTAAACCATATACCCCAACC
ACATTGGATTCTGATGTTGGTCATTTTGAATTGGTTATTAAGATGTACCC
CCAAGGAAGGATGTCACACCATTTCCGTGAGATGCGTGTTGGTGATTATC
TTGCCGTGAAGGGACCCAAGGGTCGATTCAGGTATCAACCTGGCCAGGTC
AGAGCATTTGGGATGACTGCAGGAGGTTCTGGCATCACTCCAATGTTCCA
AGTTACTAGAGCCATATTAGAGAACCCAAATGACAAGACAAAGGTGCACC
TCATTTATGCCAATGTTACATATGAGGACATTCTTTTAAAGGAAGAATTG
GATGGATTTGCGGCGAAGTACCCTGATCAATTCACAATCTACTATGTGTT
GAATCAGCCTCCTGAATCGTGGAATGGTGGTGTTGGCTTTGTCTCAAAGG
AAATGATTCAAACCCATTGTCCCGCACCTGCTTCTGATATTCAGGTTCTG
AGATGTGGTCCACCACCAATGAACAAGGCCATGGCTGCTCACCTCGAGGC
ACTTGGATATACTTCAGAAATGCTGTTCCAGTTCTGATCACTTCCATAAG
GTTGTCCAATTATTTGGACTGATATTCGTCACTCCTATTCGGTCCACATA
AAGAACTTTTTTACATCTCTTTTAAGCTGTATTTTGTTTCTCCTGTGACT
AAAGAAGCCGATGAAACCGGAGCATGGATTTTGTAATTGATCTTTTGCTT
TAACC
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