EH406255

Overview
NameEH406255
Unique NameEH406255
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15071 contig Ccv1_Contig15071:287..1041. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.471e-35
Identity = 80/198 (40.40%), Postives = 123/198 (62.12%), Query Frame = 3
Query:   30 IKPYTPTTLDSDVGHFELVIKMYPQG---------RMSHHFREMRVGDYLAVKGPKGRFRYQ-PGQVRAFG---------MTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP-PESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGY 560
            ++ YTPT+   +VG+FELV+K+Y +G         +MS +   +++G +L VKGP G   YQ  G     G         M AGG+GITP++QV +AIL++P D T+++++YAN T +DILLKEELD +A K P++  ++YV+     E W   +GF+S+ +++ H P P+     L CGPPPM + A+  +LE +GY
Sbjct:  698 MRAYTPTSTIDEVGYFELVVKIYFKGIHPKFPNGGQMSQYLDSLQLGSFLDVKGPLGHIEYQGKGNFLVHGKQKFAKKLAMIAGGTGITPVYQVMQAILKDPEDDTEMYVVYANRTEDDILLKEELDSWAEKIPERVKVWYVVQDSIKEGWKYSLGFISEAILREHIPEPSHTTLALACGPPPMIQFAVNPNLEKMGY 895          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NIA_SPIOL (Nitrate reductase [NADH] OS=Spinacia oleracea GN=NIA PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.921e-35
Identity = 75/197 (38.07%), Postives = 122/197 (61.93%), Query Frame = 3
Query:   30 IKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGY 560
            ++ YTP++    VG+F+LV+K+Y +         G MS H   + +G  + VKGP G   Y          +P   +   M +GG+GITP++QV +AIL++P DKT++H++YAN T EDILL+EELD +A ++ D+  ++YV+ +  E W    GF+S+++++ H PA   D+  L CGPPPM + A+  +L+ +G+
Sbjct:  721 MRAYTPSSTIDVVGYFDLVVKVYFKDVHPRFPNGGVMSQHLDSLSLGSIVDVKGPLGHIEYLGKGNFTVHGKPKFAKKLAMISGGTGITPIYQVMQAILKDPEDKTEMHVVYANRTEEDILLREELDKWADEFRDRVKVWYVVEKAEEGWKYDTGFISEKILRDHVPAVGDDVLALTCGPPPMIQFAVQPNLDKMGF 917          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NIA2_TOBAC (Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN=NIA2 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.921e-35
Identity = 80/198 (40.40%), Postives = 122/198 (61.62%), Query Frame = 3
Query:   30 IKPYTPTTLDSDVGHFELVIKMYPQG---------RMSHHFREMRVGDYLAVKGPKGRFRYQ-PGQVRAFG---------MTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP-PESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGY 560
            ++ YTPT+   +VG+FELV+K+Y +G         +MS +   M +G +L VKGP G   YQ  G     G         M AGG+GITP++QV +AIL++P D T+++++YAN T +DILLKEELD +A K P++  ++YV+     E W   +GF+++ +++ H P P+     L CGPPPM + A+  +LE +GY
Sbjct:  698 MRAYTPTSTIDEVGYFELVVKIYFKGIHPKFPNGGQMSQYLDSMPLGSFLDVKGPLGHIEYQGKGNFLVHGKQKFAKKLAMIAGGTGITPVYQVMQAILKDPEDDTEMYVVYANRTEDDILLKEELDSWAEKIPERVKVWYVVQDSIKEGWKYSIGFITEAILREHIPEPSHTTLALACGPPPMIQFAVNPNLEKMGY 895          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NIA2_PHAVU (Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.921e-35
Identity = 77/201 (38.31%), Postives = 123/201 (61.19%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGY 560
            G+  ++ YTPT+   +VG F+L+IK+Y +         G MS +   + +G  L VKGP G   Y          +    +   M AGG+GITP++QV +AIL++P D T++H++YAN T +DILL+EELD +A ++ ++F ++YV+    E W  GVGF+++ +++ H P  +SD   + CGPPPM + A+  +LE +GY
Sbjct:  681 GKLCMRAYTPTSSVEEVGFFDLLIKVYFKDVHPKFPNGGLMSQYLESLSIGSMLDVKGPLGHIEYTGRGNFTVNGKSRFAKRLAMLAGGTGITPIYQVAQAILKDPEDLTEMHVVYANRTEDDILLREELDTWAKEHCERFKVWYVVETAKEGWGYGVGFITEAIMREHLPEASSDSLAMTCGPPPMIQFAVQPNLEKMGY 881          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1_KLULA (NADH-cytochrome b5 reductase 2 OS=Kluyveromyces lactis GN=MCR1 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.921e-35
Identity = 74/203 (36.45%), Postives = 110/203 (54.19%), Query Frame = 3
Query:   15 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKA-------------MAAHLEALGYTSEMLFQF 584
            +G  VI+PYTP + +   G  ELV+K Y  G+ + H   ++  D ++ KGP  ++ ++P    +  +   G+GI P++Q+   I ENP D TK+HL Y N T EDILLK ELD    KYPDQ  I Y +++   ++ G  GF++K+ +    P P+   QV  CGPPP  KA             +   L  LGY+   +F+F
Sbjct:   94 KGSNVIRPYTPVSDNGTKGKMELVVKHYENGKFTSHLFGLKENDTVSFKGPITKWEWKPNSYDSITLLGAGTGINPLYQLVHHIAENPEDNTKIHLYYGNKTPEDILLKSELDNLQKKYPDQVKITYFVDKAEGNFEGETGFITKDYLSHQAPKPSEKNQVFVCGPPPFMKAYSGPKVSPQDQGELTGILAELGYSKSNVFKF 296          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.301e-35
Identity = 76/198 (38.38%), Postives = 121/198 (61.11%), Query Frame = 3
Query:   30 IKPYTPTTLDSDVGHFELVIKMYPQG---------RMSHHFREMRVGDYLAVKGPKGRFRYQPGQ----------VRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP-PESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGY 560
            ++ YTPT+   +VG+FELV+K+Y +G         +MS +   + +G ++ VKGP G   YQ              +   M AGG+GITP++QV +AIL++P D+T++H++YAN T +DILLK+ELD +A K P++  ++YV+     E W    GF+++ +++ H P P+     L CGPPPM + A+  +LE +GY
Sbjct:  703 MRAYTPTSTVDEVGYFELVVKIYFKGIVPKFPNGGQMSQYLDSLPLGAFVDVKGPLGHIEYQGRGNFLVHGKRKFAKKLAMLAGGTGITPVYQVMQAILKDPEDETEMHVVYANRTEDDILLKDELDSWAVKLPERVKVWYVVQDSIKEGWKYSTGFITEAVLREHIPLPSQTTLALACGPPPMIQFAVNPNLEKMGY 900          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NIA1_SOYBN (Inducible nitrate reductase [NADH] 1 OS=Glycine max GN=INR1 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.536e-35
Identity = 81/201 (40.30%), Postives = 121/201 (60.20%), Query Frame = 3
Query:   30 IKPYTPTTLDSDVGHFELVIKMYPQGR---------MSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP-PESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGYTSE 569
            ++ YTPT+   +VG+F+LV+K+Y +G          MS H   + +G  L VKGP G   Y          +P       M AGG+GITP++QV +AIL++P D T++H++YAN T +DILLKEELD +A KY D+  ++YV+ +   E W   VGF+++ ++  H P  + D   L CGPPPM + A+  +LE LGY ++
Sbjct:  681 MRAYTPTSSVHEVGYFDLVVKVYFKGVHPKFPNGGIMSQHLDSLPIGSVLDVKGPLGHIEYTGRGNFLVHGKPRFATRLAMLAGGTGITPIYQVVQAILKDPEDCTEMHVVYANRTEDDILLKEELDEWAKKY-DRLKVWYVIQESIREGWEYSVGFITESILTEHIPNASPDTLALTCGPPPMIQFAVQPNLEKLGYDTQ 880          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.627e-34
Identity = 82/201 (40.80%), Postives = 120/201 (59.70%), Query Frame = 3
Query:   30 IKPYTPTTLDSDVGHFELVIKMYPQGR---------MSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP-PESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGYTSE 569
            ++ YTPT+   +VG+F+LV+K+Y +G          MS H   + +G  L VKGP G   Y          +P       M AGG+GITP++QV RAIL++P D T++H++YAN T +DILLKEELD +A KY D+  ++YV+     E W   VGF+++ ++  H P  + D   L CGPPPM + A+  +LE LGY ++
Sbjct:  685 MRAYTPTSSVHEVGYFDLVVKVYFKGVHPKFPTGGIMSQHLDSLPIGSVLDVKGPLGHIVYTGRGNFLVHGKPRFATRLAMLAGGTGITPIYQVVRAILKDPEDCTEMHVVYANRTEDDILLKEELDEWAKKY-DRLKVWYVIQASIREGWEYSVGFITESILTEHIPNASPDTLALTCGPPPMIQFAVQPNLEKLGYDTQ 884          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: MCR1_CANGA (NADH-cytochrome b5 reductase 2 OS=Candida glabrata GN=MCR1 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.624e-34
Identity = 73/204 (35.78%), Postives = 116/204 (56.86%), Query Frame = 3
Query:   15 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTI-YYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAH-------------LEALGYTSEMLFQF 584
            +G  VI+PYTP +  S+ G+ E VIK Y  G+M+ H  +++  D LA +GP  +++++P       +  GG+GITP++Q+   I +N  DKTK++L Y + T  DILLK+ELD    KYP+Q  I Y+V       ++G  GF++K+ +  + P P    QV  CGPPP   +++               L+ LGY+ + +F+F
Sbjct:   95 KGNPVIRPYTPVSDLSEKGYIEFVIKHYEGGKMTDHLFQLKPKDTLAFQGPIPKWQWKPNSFDTITLLGGGTGITPLYQLVHHITQNKEDKTKINLFYGSKTPSDILLKKELDDLQKKYPEQLNIQYFVDKDDTGKFDGNKGFITKDFLAKNAPGPKEKTQVFVCGPPPFMDSLSGQKKSPMEQGDLTGALKDLGYSQDQVFKF 298          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NIA_SOLLC (Nitrate reductase [NADH] OS=Solanum lycopersicum GN=NIA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.181e-34
Identity = 77/198 (38.89%), Postives = 121/198 (61.11%), Query Frame = 3
Query:   30 IKPYTPTTLDSDVGHFELVIKMYPQG---------RMSHHFREMRVGDYLAVKGPKGRFRYQ-PGQVRAFG---------MTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP-PESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNK-AMAAHLEALGY 560
            ++ YTPT+   +VG FELV+K+Y +G         +MS H   + +G +L VKGP G   YQ  G     G         M AGG+GITP++QV ++IL++P D T+++++YAN T +DILLK+ELD +A + P++  ++YV+ +   + W    GFV++ +++ H P P+     L CGPPPM + A+  +LE +GY
Sbjct:  705 MRAYTPTSTVDEVGFFELVVKIYFKGVHPKFPNGGQMSQHLDSLPIGAFLDVKGPLGHIEYQGKGNFLVHGKQKFAKKLAMIAGGTGITPVYQVMQSILKDPEDDTEMYVVYANRTEDDILLKDELDAWAEQVPNRVKVWYVVQESITQGWKYSTGFVTESILREHIPEPSHTTLALACGPPPMIQFAINPNLEKMGY 902          
The following BLAST results are available for this feature:
BLAST of EH406255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
NIA1_TOBAC1.471e-3540.40Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
NIA_SPIOL1.921e-3538.07Nitrate reductase [NADH] OS=Spinacia oleracea GN=N... [more]
NIA2_TOBAC1.921e-3540.40Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN... [more]
NIA2_PHAVU1.921e-3538.31Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris G... [more]
MCR1_KLULA1.921e-3536.45NADH-cytochrome b5 reductase 2 OS=Kluyveromyces la... [more]
NIA_PETHY7.301e-3538.38Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]
NIA1_SOYBN9.536e-3540.30Inducible nitrate reductase [NADH] 1 OS=Glycine ma... [more]
NIA2_SOYBN1.627e-3440.80Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]
MCR1_CANGA3.624e-3435.78NADH-cytochrome b5 reductase 2 OS=Candida glabrata... [more]
NIA_SOLLC6.181e-3438.89Nitrate reductase [NADH] OS=Solanum lycopersicum G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2BC05ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406255 ID=EH406255; Name=EH406255; organism=Citrus clementina; type=EST; length=755bp
GGGGCAAGGATAGTCAGGGTGAAGAGGTTATTAAACCATATACCCCAACC
ACATTGGATTCTGATGTTGGTCATTTTGAATTGGTTATTAAGATGTACCC
CCAAGGAAGGATGTCACACCATTTCCGTGAGATGCGTGTTGGTGATTATC
TTGCCGTGAAGGGACCCAAGGGTCGATTCAGGTATCAACCTGGCCAGGTC
AGAGCATTTGGGATGACTGCAGGAGGTTCTGGCATCACTCCAATGTTCCA
AGTTACTAGAGCCATATTAGAGAACCCAAATGACAAGACAAAGGTGCACC
TCATTTATGCCAATGTTACATATGAGGACATTCTTTTAAAGGAAGAATTG
GATGGATTTGCGGCGAAGTACCCTGATCAATTCACAATCTACTATGTGTT
GAATCAGCCTCCTGAATCGTGGAATGGTGGTGTTGGCTTTGTCTCAAAGG
AAATGATTCAAACCCATTGTCCCGCACCTGCTTCTGATATTCAGGTTCTG
AGATGTGGTCCACCACCAATGAACAAGGCCATGGCTGCTCACCTCGAGGC
ACTTGGATATACTTCAGAAATGCTGTTCCAGTTCTGATCACTTCCATAAG
GTTGTCCAATTATTTGGACTGATATTCGTCACTCCTATTCGGTCCACATA
AAGAACTTTTTTACATCTCTTTTAAGCTGTATTTTGTTTCTCCTGTGACT
AAAGAAGCCGATGAAACCGGAGCATGGATTTTGTAATTGATCTTTTGCTT
TAACC
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