EH406383

Overview
NameEH406383
Unique NameEH406383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length780
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EH406383 vs. ExPASy Swiss-Prot
Match: HNRPG_HUMAN (Heterogeneous nuclear ribonucleoprotein G OS=Homo sapiens GN=RBMX PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 32/76 (42.11%), Postives = 50/76 (65.79%), Query Frame = 1 
Query:  187 KLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 414
            KLF+GGL+  T++ +L+  F  +G I E  ++ +RE+ KSRGF FVT++S   A  A   M+G+ L+G+ I+V  A
Sbjct:    9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
The following BLAST results are available for this feature:
BLAST of EH406383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
HNRPG_HUMAN7.749e-1142.11Heterogeneous nuclear ribonucleoprotein G OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3DF03ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406383 ID=EH406383; Name=EH406383; organism=Citrus clementina; type=EST; length=780bp
GGCCGTTTCTTCATCATCGTCAGTCCTCCTCTCTTCAAATCCTTTGCTTC
TGTTTCTCTTGCTTAAGAGTGTTGACAGACAAAAATGGCATTTTGTGGCA
AACTTGGGATGCTAGTTAGGCAGAATGGCCAGGCTCCAAAGGCATCTTTG
ATAAATGCGGTTCGATTCATGTCGCAATCACAAACTAAGCTTTTTGTTGG
AGGGCTATCTTGGGGAACCGATGACAGTTCTCTCAAGGAAGCGTTTTCCA
ACTTTGGCGATATCACTGAAGCAAAGGTTATTACTGAGAGAGAATCTGGG
AAGTCAAGAGGATTTGGGTTCGTTACCTACGACTCTAATGAATCTGCCAG
CTCGGCACAGTCTGCAATGGATGGCCAGGAGCTAAATGGGAGAAACATTC
GGGTGTCTTTTGCCAATGACAGACCTCCTCGCTCTGACGGTGGCTATGGT
GGAGGGAATGATGGATCTTATGGCGGCAACCGTGGCGGTTACAGAGTCAA
CTACAGAGGAGGGGATGATGGTTTTTAAGGGGATTCTATTCAATTTTTGG
GCGTGCTTTAACTAGGAATTAAAGTTTTATGTTTGTTTTAAGGATGGAAG
TTTAGCACTACTGAATTTGTTATTATGTTGGCTTTTATTTATCAGCCTTG
CCCCCTTAATTGCATATTATATAGCTATGCAGGCCAGGTAAGATGTTTGA
CACTGCCATGCGTCCGTCATTTGTTTGACATTTTTTCGGTCATGGTTAAA
ACATATTAATGGTTTGTTGACTGCAGGTTG
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