FC868491

Overview
NameFC868491
Unique NameFC868491
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: ERK2_DICDI (Extracellular signal-regulated kinase 2 OS=Dictyostelium discoideum GN=erkB PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.653e-19
Identity = 43/93 (46.24%), Postives = 67/93 (72.04%), Query Frame = 1
Query:  355 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            ++ IG+GAYGIV  A++ +T++ VA+KKI +AF N  DA+RT REI  L+ +  HEN+I + ++I   K D   D+Y+V+E M+TDLH ++R+
Sbjct:   17 LQKIGKGAYGIVWKAIDKKTKQTVALKKIFDAFQNATDAQRTFREIMFLQELHGHENIIKLLNVI---KADNDRDIYLVFEHMETDLHAVIRA 106          

HSP 2 Score: 26.1794 bits (56), Expect = 3.653e-19
Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  651 HCQYFLYQLLRGFEYVH 701
            H QY +YQLL+  +Y+H
Sbjct:  113 HKQYTIYQLLKALKYMH 129          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: PMK1_CAEEL (Mitogen-activated protein kinase pmk-1 OS=Caenorhabditis elegans GN=pmk-1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.749e-19
Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 1
Query:  331 VSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVR----SDQH*RMII 654
            V   Y   + PIG GAYG VCAA  + +   VAIKK    F +II ARRT RE++LLR M HEN+I + D+  P +  +   DVY V  LM  DL  I++    +D H + ++
Sbjct:   30 VVPNYYINLTPIGTGAYGTVCAAECTRSGTRVAIKKFNRPFQSIIHARRTYRELRLLRCMCHENIIDLLDVFTPNENVNDIEDVYFVSMLMGADLSNILKIQRLNDDHIQFLV 142          

HSP 2 Score: 31.5722 bits (70), Expect = 4.749e-19
Identity = 10/18 (55.56%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  648 DHCQYFLYQLLRGFEYVH 701
            DH Q+ +YQ+LRG +Y+H
Sbjct:  136 DHIQFLVYQILRGLKYIH 153          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK13_BOVIN (Mitogen-activated protein kinase 13 OS=Bos taurus GN=MAPK13 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 6.179e-19
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 1
Query:  295 YVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIV 624
            + + +V    +E+   YV  +  IG GAYG VC+A++  + E+VAIKK+   F + I A+R  RE+ LL+HM+HENVI + D+  P      F+D Y+V   M TDL +I+
Sbjct:    9 FYKQDVNKTAWELPKTYVS-LTHIGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFHDFYLVMPFMQTDLQKIM 118          

HSP 2 Score: 28.4906 bits (62), Expect = 6.179e-19
Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  648 DHCQYFLYQLLRGFEYVH 701
            D  QY +YQ+L+G +Y+H
Sbjct:  125 DKIQYLVYQMLKGLKYIH 142          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK13_PANTR (Mitogen-activated protein kinase 13 OS=Pan troglodytes GN=MAPK13 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.037e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:  328 EVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIV 624
            E+   YV P   +G GAYG VC+A++  + E+VAIKK+   F + I A+R  RE+ LL+HM+HENVI + D+  P      F+D Y+V   M TDL +I+
Sbjct:   20 ELXKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFHDFYLVMXFMQTDLQKIM 118          

HSP 2 Score: 26.9498 bits (58), Expect = 8.037e-19
Identity = 8/15 (53.33%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  657 QYFLYQLLRGFEYVH 701
            QY +YQ+L+G +Y+H
Sbjct:  128 QYLVYQMLKGLKYIH 142          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK13_HUMAN (Mitogen-activated protein kinase 13 OS=Homo sapiens GN=MAPK13 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.037e-19
Identity = 45/111 (40.54%), Postives = 67/111 (60.36%), Query Frame = 1
Query:  295 YVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIV 624
            + + +V    +E+   YV P   +G GAYG VC+A++  + E+VAIKK+   F + I A+R  RE+ LL+HM+HENVI + D+  P      F D Y+V   M TDL +I+
Sbjct:    9 FYKQDVNKTAWELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM 118          

HSP 2 Score: 26.9498 bits (58), Expect = 8.037e-19
Identity = 8/15 (53.33%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  657 QYFLYQLLRGFEYVH 701
            QY +YQ+L+G +Y+H
Sbjct:  128 QYLVYQMLKGLKYIH 142          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: JNK_DROME (Stress-activated protein kinase JNK OS=Drosophila melanogaster GN=bsk PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.497e-19
Identity = 48/110 (43.64%), Postives = 73/110 (66.36%), Query Frame = 1
Query:  325 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD-QH*RM 648
            F + S+Y+  +RPIG GA GIVCAA ++ T++ VAIKK+   F N+  A+R  RE KL++ + H+N+I + +   P +  + F DVY+V ELMD +L Q+++ D  H RM
Sbjct:   18 FTIHSRYIN-LRPIGSGAQGIVCAAYDTITQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQRNLEEFQDVYLVMELMDANLCQVIQMDLDHDRM 126          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK13_RAT (Mitogen-activated protein kinase 13 OS=Rattus norvegicus GN=Mapk13 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.045e-18
Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 1
Query:  295 YVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIV 624
            + + ++    +E+   Y+ P   +G GAYG VC+A++  T E+VAIKK+   F + I A+R  RE+ LL+HM HENVI + D+  P      F D Y+V   M TDL +I+
Sbjct:    9 FYKQDINKTAWELPKTYLAPAH-VGSGAYGAVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMHHENVIGLLDVYTPATSVRNFQDFYLVMPFMQTDLQKIM 118          

HSP 2 Score: 26.9498 bits (58), Expect = 1.045e-18
Identity = 8/15 (53.33%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  657 QYFLYQLLRGFEYVH 701
            QY +YQ+L+G +Y+H
Sbjct:  128 QYLVYQMLKGLKYIH 142          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: HOG1_SETTU (Mitogen-activated protein kinase HOG1 OS=Setosphaeria turcica GN=HOG1 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.772e-18
Identity = 38/86 (44.19%), Postives = 58/86 (67.44%), Query Frame = 1
Query:  373 GAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRS 630
            GA+G+VC+A +  T + VA+KKI   F   + ++RT RE+KLL+H+ HEN+I++ DI   P      D+Y V EL+ TDLH+++ S
Sbjct:    2 GAFGLVCSAKDQLTNQAVAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFISP----LEDIYFVTELLGTDLHRLLTS 83          

HSP 2 Score: 31.5722 bits (70), Expect = 1.772e-18
Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  657 QYFLYQLLRGFEYVH 701
            QYFLYQ+LRG +Y+H
Sbjct:   92 QYFLYQILRGLKYIH 106          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MAPK1_PNECA (Mitogen-activated protein kinase 1 OS=Pneumocystis carinii GN=MKP1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.884e-18
Identity = 51/120 (42.50%), Postives = 75/120 (62.50%), Query Frame = 1
Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETRE--EVAIKKIGNAFDNIIDARRTLREIKLLRHM-EHENVIAI--KDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            K+  +NV G  F +   Y   I+ +G+G+YG+VC+A N E  +  +VAIKKI N F   + A+R LREI LL+H   H+N+  +   DI+ P K   FN++Y+  ELM  +L+ I+RSDQ
Sbjct:    4 KHSVFNVMGQEFVLQKGY-EVIKGLGKGSYGVVCSAKNIEVEDNNKVAIKKITNIFSKKMLAKRALREIMLLQHFRNHKNITTLYDMDIVDPSK---FNELYLYEELMQANLNSIIRSDQ 119          

HSP 2 Score: 26.5646 bits (57), Expect = 3.884e-18
Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  651 HCQYFLYQLLRGFEYVH 701
            H Q F+YQ+L G +Y+H
Sbjct:  125 HFQSFIYQILCGLKYIH 141          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: JNK1_CAEEL (Stress-activated protein kinase jnk-1 OS=Caenorhabditis elegans GN=jnk-1 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.508e-18
Identity = 45/94 (47.87%), Postives = 64/94 (68.09%), Query Frame = 1
Query:  355 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD 633
            +R IG GA GIVC+A ++   E+VAIKK+   F N+  A+R  RE+KL+  + H+N+I I +   P KK D FND+YIV ELMD +L Q+++ D
Sbjct:  122 LRLIGSGAQGIVCSAFDTVRNEQVAIKKLSRPFQNVTHAKRAYRELKLMSLVNHKNIIGILNCFTPQKKLDEFNDLYIVMELMDANLCQVIQMD 215          
The following BLAST results are available for this feature:
BLAST of FC868491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
ERK2_DICDI3.653e-1946.24Extracellular signal-regulated kinase 2 OS=Dictyos... [more]
PMK1_CAEEL4.749e-1942.48Mitogen-activated protein kinase pmk-1 OS=Caenorha... [more]
MK13_BOVIN6.179e-1940.54Mitogen-activated protein kinase 13 OS=Bos taurus ... [more]
MK13_PANTR8.037e-1944.00Mitogen-activated protein kinase 13 OS=Pan troglod... [more]
MK13_HUMAN8.037e-1940.54Mitogen-activated protein kinase 13 OS=Homo sapien... [more]
JNK_DROME8.497e-1943.64Stress-activated protein kinase JNK OS=Drosophila ... [more]
MK13_RAT1.045e-1839.64Mitogen-activated protein kinase 13 OS=Rattus norv... [more]
HOG1_SETTU1.772e-1844.19Mitogen-activated protein kinase HOG1 OS=Setosphae... [more]
MAPK1_PNECA3.884e-1842.50Mitogen-activated protein kinase 1 OS=Pneumocystis... [more]
JNK1_CAEEL5.508e-1847.87Stress-activated protein kinase jnk-1 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionC31001A06EF AbioticL1 Citrus clementina cDNA clone C31001A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868491 ID=FC868491; Name=FC868491; organism=Citrus clementina; type=EST; length=702bp
CTTCCCGGGGACGGATTTTCAAACAAATTTCATTACCAAAGGTGTGGTTA
CGAGGCGCAAAAAGTTGTTGCTGCATTCAAATTTTCACATTCACAACACG
CTCTGGCAAGACCCAAATGCTCAAGCTCAACCAAACCGAGCAAGCTCAAC
TCTGATAAAACAGTAAACGGCCAGAAGCAGAGAAAAAGAGAACCCAGTTC
TGGGTTTTGAGTGAAAATGGCAGCAGCGGCGAAGGATTCGAGTTCAGGTG
GTGCGACTAGCAGTGTCAAAGGGGTGCTCACACATGGGGGTAAATACGTA
CAGTACAATGTTTACGGTAACCTTTTTGAGGTTTCTAGCAAGTATGTCCC
TCCCATTCGACCCATTGGTAGGGGTGCTTATGGCATTGTTTGCGCTGCTG
TAAATTCAGAGACACGCGAGGAGGTTGCCATTAAGAAGATCGGTAATGCA
TTTGACAACATAATAGATGCCAGAAGGACCTTGAGAGAAATTAAGCTTCT
TCGCCACATGGAGCATGAAAATGTCATCGCCATTAAGGATATCATTCGGC
CTCCCAAAAAGGACACCTTTAATGATGTATACATTGTTTATGAATTGATG
GACACTGATCTTCACCAGATAGTTCGCTCTGACCAACACTAACGGATGAT
CATTGTCAGTACTTTTTATATCAGTTGTTACGAGGATTTGAATATGTACA
TT
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