FC868491

Overview
NameFC868491
Unique NameFC868491
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK12_DANRE (Mitogen-activated protein kinase 12 OS=Danio rerio GN=mapk12 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.568e-18
Identity = 41/115 (35.65%), Postives = 71/115 (61.74%), Query Frame = 1
Query:  295 YVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPP-KKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            Y +  +   ++EV  +Y   ++ +G GAYG VC A++  T  +VAIKK+   F + + A+R  RE++LL+HM+H+NVI + D+       D F+D Y+V   M TDL ++++ ++
Sbjct:    9 YFRQEINKTIWEVPDRY-KDLKQVGTGAYGTVCYALDRRTGAKVAIKKLHRPFQSDLFAKRAYRELRLLKHMKHDNVIGLVDVFTADLSLDRFHDFYLVMPFMGTDLGKLMKMER 122          

HSP 2 Score: 27.335 bits (59), Expect = 6.568e-18
Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  648 DHCQYFLYQLLRGFEYVH 701
            +  QY +YQ+L+G +Y+H
Sbjct:  126 ERVQYLVYQMLKGLKYIH 143          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: SPM1_SCHPO (Mitogen-activated protein kinase spm1 OS=Schizosaccharomyces pombe GN=spm1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.511e-18
Identity = 54/107 (50.47%), Postives = 67/107 (62.62%), Query Frame = 1
Query:  343 YVPP----IRPIGRGAYGIVCAAVN--SETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM-EHENVIAI--KDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            YV P    ++ +G+GAYGIVCAA N  S+ +E VAIKKI N F   I  +R LREIKLL H   H N+  I   DII P     FN+VYI  ELM+ DL+ I++S Q
Sbjct:   16 YVEPNFKVVKELGQGAYGIVCAARNVASKDQEAVAIKKITNVFSKSILTKRALREIKLLIHFRNHRNITCIYDLDIINP---YNFNEVYIYEELMEADLNAIIKSGQ 119          

HSP 2 Score: 26.5646 bits (57), Expect = 8.511e-18
Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  651 HCQYFLYQLLRGFEYVH 701
            H Q F+YQ+L G +Y+H
Sbjct:  125 HFQSFIYQILCGLKYIH 141          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: PMK2_CAEEL (Mitogen-activated protein kinase pmk-2 OS=Caenorhabditis elegans GN=pmk-2 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.512e-18
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = 1
Query:  355 IRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRP-PKKDTFNDVYIVYELMDTDLHQIVR 627
            ++P+G GAYG+VC A    T + VAIKK    F + I A+RT RE+KLLR ++H+NV+ + D+  P P   + N+VY V  LM +DL  I++
Sbjct:   52 LKPLGEGAYGVVCTAEYEPTGDRVAIKKFFRPFQSTIHAKRTYRELKLLRTLQHDNVLEMIDVFTPDPDASSLNNVYFVSVLMGSDLQNIMK 143          

HSP 2 Score: 25.409 bits (54), Expect = 8.512e-18
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  648 DHCQYFLYQLLRGFEYVH 701
            +  Q  +YQ+LRG +Y+H
Sbjct:  150 EQIQLLIYQVLRGLKYIH 167          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: JNK_SUBDO (Stress-activated protein kinase JNK OS=Suberites domuncula GN=JNK PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17
Identity = 44/111 (39.64%), Postives = 71/111 (63.96%), Query Frame = 1
Query:  295 YVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIV 624
            Y    V   +F V  +Y   +  IG GA G+VC+A ++ T+E++AIKK+   F N   A+R  RE++L++ ++H+N+I +K++  P K  D F DVYIV ELMD +L +++
Sbjct:    6 YYSQRVGDTVFTVQKRYTN-LTNIGSGAQGVVCSAFDTVTQEKIAIKKLVKPFQNETYAKRAFRELRLMKMVDHKNIIGLKNLFTPAKSLDDFQDVYIVMELMDANLCRVI 115          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: SLT2_YEAST (Mitogen-activated protein kinase SLT2/MPK1 OS=Saccharomyces cerevisiae GN=SLT2 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.998e-17
Identity = 48/116 (41.38%), Postives = 72/116 (62.07%), Query Frame = 1
Query:  304 YNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREE--VAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAI--KDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            + V+   F V  ++   I+ IG GAYGIVC+A  +E  E+  VAIKK+ N F   +  +R+LRE+KLLRH   H+N+  +   DI+  P   + N +Y+  ELM+ D+HQI++S Q
Sbjct:   10 FKVFNQDFSVDKRF-QLIKEIGHGAYGIVCSARFAEAAEDTTVAIKKVTNVFSKTLLCKRSLRELKLLRHFRGHKNITCLYDMDIVFYP-DGSINGLYLYEELMECDMHQIIKSGQ 123          

HSP 2 Score: 25.409 bits (54), Expect = 8.998e-17
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 3
Query:  651 HCQYFLYQLLRGFEYVH 701
            H Q F YQ+L G +Y+H
Sbjct:  129 HYQSFTYQILCGLKYIH 145          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: KKQ1_YEAST (Probable serine/threonine-protein kinase YKL161C OS=Saccharomyces cerevisiae GN=YKL161C PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.524e-16
Identity = 48/116 (41.38%), Postives = 74/116 (63.79%), Query Frame = 1
Query:  304 YNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREE--VAIKKIGNAFDNIIDARRTLREIKLLRHME-HENVIAI--KDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            +  +G  F + +K+      IGRG++ ++C++  +E+ EE  VAI+KI NAF N +  +RTLRE+KLLRH+  H N++ +   DI+  P     N VY+  ELM+ DL QI+RS+Q
Sbjct:   10 FRAFGQDF-ILNKHFHLTGKIGRGSHSLICSSTYTESNEETHVAIRKIPNAFGNKLSCKRTLRELKLLRHLRGHPNIVWLFDTDIVFYP-NGALNGVYLYEELMECDLSQIIRSEQ 123          

HSP 2 Score: 24.2534 bits (51), Expect = 1.524e-16
Identity = 8/17 (47.06%), Postives = 12/17 (70.59%), Query Frame = 3
Query:  651 HCQYFLYQLLRGFEYVH 701
            H Q F+YQ+L   +Y+H
Sbjct:  129 HFQSFIYQILCALKYIH 145          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK09_RAT (Mitogen-activated protein kinase 9 OS=Rattus norvegicus GN=Mapk9 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16
Identity = 47/122 (38.52%), Postives = 73/122 (59.84%), Query Frame = 1
Query:  289 GKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD-QH*RM 648
            G++    V  + F V  +Y   ++PIG GA GIVCAA ++     VA+KK+   F N   A+R  RE+ LL+ + H+N+I++ ++  P K  + F DVY+V ELMD +L Q++  +  H RM
Sbjct:    8 GQFYSVQVADSTFTVLKRY-QQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERM 128          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK09_MOUSE (Mitogen-activated protein kinase 9 OS=Mus musculus GN=Mapk9 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16
Identity = 47/122 (38.52%), Postives = 73/122 (59.84%), Query Frame = 1
Query:  289 GKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD-QH*RM 648
            G++    V  + F V  +Y   ++PIG GA GIVCAA ++     VA+KK+   F N   A+R  RE+ LL+ + H+N+I++ ++  P K  + F DVY+V ELMD +L Q++  +  H RM
Sbjct:    8 GQFYSVQVADSTFTVLKRY-QQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERM 128          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK15_HUMAN (Mitogen-activated protein kinase 15 OS=Homo sapiens GN=MAPK15 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.329e-16
Identity = 45/91 (49.45%), Postives = 64/91 (70.33%), Query Frame = 1
Query:  358 RPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHM-EHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVR 627
            R +G+GAYGIV  AV+  T E VAIKKI +AF +  DA+RT REI LL+   +H N+I++ D+IR    +   D+Y+V+E MDTDL+ ++R
Sbjct:   17 RQLGQGAYGIVWKAVDRRTGEVVAIKKIFDAFRDKTDAQRTFREITLLQEFGDHPNIISLLDVIR---AENDRDIYLVFEFMDTDLNAVIR 104          

HSP 2 Score: 20.4014 bits (41), Expect = 3.329e-16
Identity = 7/17 (41.18%), Postives = 10/17 (58.82%), Query Frame = 3
Query:  651 HCQYFLYQLLRGFEYVH 701
            H +   YQLLR   ++H
Sbjct:  113 HVRSIFYQLLRATRFLH 129          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK08_RAT (Mitogen-activated protein kinase 8 OS=Rattus norvegicus GN=Mapk8 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 46/120 (38.33%), Postives = 71/120 (59.17%), Query Frame = 1
Query:  295 YVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD-QH*RM 648
            +    +  + F V  +Y   ++PIG GA GIVCAA ++     VAIKK+   F N   A+R  RE+ L++ + H+N+I + ++  P K  + F DVYIV ELMD +L Q+++ +  H RM
Sbjct:   10 FYSVEIADSTFTVLKRY-QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 128          
The following BLAST results are available for this feature:
BLAST of FC868491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
MK12_DANRE6.568e-1835.65Mitogen-activated protein kinase 12 OS=Danio rerio... [more]
SPM1_SCHPO8.511e-1850.47Mitogen-activated protein kinase spm1 OS=Schizosac... [more]
PMK2_CAEEL8.512e-1844.57Mitogen-activated protein kinase pmk-2 OS=Caenorha... [more]
JNK_SUBDO4.662e-1739.64Stress-activated protein kinase JNK OS=Suberites d... [more]
SLT2_YEAST8.998e-1741.38Mitogen-activated protein kinase SLT2/MPK1 OS=Sacc... [more]
KKQ1_YEAST1.524e-1641.38Probable serine/threonine-protein kinase YKL161C O... [more]
MK09_RAT3.022e-1638.52Mitogen-activated protein kinase 9 OS=Rattus norve... [more]
MK09_MOUSE3.022e-1638.52Mitogen-activated protein kinase 9 OS=Mus musculus... [more]
MK15_HUMAN3.329e-1649.45Mitogen-activated protein kinase 15 OS=Homo sapien... [more]
MK08_RAT6.733e-1638.33Mitogen-activated protein kinase 8 OS=Rattus norve... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31001A06EF AbioticL1 Citrus clementina cDNA clone C31001A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868491 ID=FC868491; Name=FC868491; organism=Citrus clementina; type=EST; length=702bp
CTTCCCGGGGACGGATTTTCAAACAAATTTCATTACCAAAGGTGTGGTTA
CGAGGCGCAAAAAGTTGTTGCTGCATTCAAATTTTCACATTCACAACACG
CTCTGGCAAGACCCAAATGCTCAAGCTCAACCAAACCGAGCAAGCTCAAC
TCTGATAAAACAGTAAACGGCCAGAAGCAGAGAAAAAGAGAACCCAGTTC
TGGGTTTTGAGTGAAAATGGCAGCAGCGGCGAAGGATTCGAGTTCAGGTG
GTGCGACTAGCAGTGTCAAAGGGGTGCTCACACATGGGGGTAAATACGTA
CAGTACAATGTTTACGGTAACCTTTTTGAGGTTTCTAGCAAGTATGTCCC
TCCCATTCGACCCATTGGTAGGGGTGCTTATGGCATTGTTTGCGCTGCTG
TAAATTCAGAGACACGCGAGGAGGTTGCCATTAAGAAGATCGGTAATGCA
TTTGACAACATAATAGATGCCAGAAGGACCTTGAGAGAAATTAAGCTTCT
TCGCCACATGGAGCATGAAAATGTCATCGCCATTAAGGATATCATTCGGC
CTCCCAAAAAGGACACCTTTAATGATGTATACATTGTTTATGAATTGATG
GACACTGATCTTCACCAGATAGTTCGCTCTGACCAACACTAACGGATGAT
CATTGTCAGTACTTTTTATATCAGTTGTTACGAGGATTTGAATATGTACA
TT
back to top