FC868491

Overview
NameFC868491
Unique NameFC868491
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK08_XENLA (Mitogen-activated protein kinase 8 OS=Xenopus laevis GN=mapk8 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 45/117 (38.46%), Postives = 71/117 (60.68%), Query Frame = 1
Query:  304 YNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD-QH*RM 648
            + +  + F V  +Y   ++PIG GA GIVCAA ++     VAIKK+   F N   A+R  RE+ L++ + H+N+I + ++  P K  + F D+YIV ELMD +L Q+++ +  H RM
Sbjct:   13 FEIGDSTFTVLKRY-QNLKPIGSGAQGIVCAAFDAVLERHVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDLYIVMELMDANLCQVIQMELDHERM 128          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK08_MOUSE (Mitogen-activated protein kinase 8 OS=Mus musculus GN=Mapk8 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 46/110 (41.82%), Postives = 68/110 (61.82%), Query Frame = 1
Query:  325 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD-QH*RM 648
            F V  +Y   ++PIG GA GIVCAA ++     VAIKK+   F N   A+R  RE+ L++ + H+N+I + ++  P K  + F DVYIV ELMD +L Q+++ +  H RM
Sbjct:   20 FTVLKRY-QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 128          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK08_HUMAN (Mitogen-activated protein kinase 8 OS=Homo sapiens GN=MAPK8 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 46/110 (41.82%), Postives = 68/110 (61.82%), Query Frame = 1
Query:  325 FEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD-QH*RM 648
            F V  +Y   ++PIG GA GIVCAA ++     VAIKK+   F N   A+R  RE+ L++ + H+N+I + ++  P K  + F DVYIV ELMD +L Q+++ +  H RM
Sbjct:   20 FTVLKRY-QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 128          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK08A_CYPCA (Mitogen-activated protein kinase 8A OS=Cyprinus carpio GN=mapk8a PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = 1
Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD 633
            ++   +V  + F V  +Y   +RPIG GA GIVC+A +      VAIKK+   F N   A+R  RE+ L++++ H+N+I + ++    K  D F DVY+V ELMD +L Q+++ +
Sbjct:    9 EFYSVDVGDSTFTVLKRY-QNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKYVNHKNIICLLNVFTSQKTLDEFQDVYLVMELMDANLCQVIQME 122          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK10_RAT (Mitogen-activated protein kinase 10 OS=Rattus norvegicus GN=Mapk10 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD-QH*RM 648
            ++    V  + F V  +Y   ++PIG GA GIVCAA ++     VAIKK+   F N   A+R  RE+ L++ + H+N+I++ ++  P K  + F DVY+V ELMD +L Q+++ +  H RM
Sbjct:   47 QFYSVEVGDSTFTVLKRY-QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 166          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK10_MOUSE (Mitogen-activated protein kinase 10 OS=Mus musculus GN=Mapk10 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD-QH*RM 648
            ++    V  + F V  +Y   ++PIG GA GIVCAA ++     VAIKK+   F N   A+R  RE+ L++ + H+N+I++ ++  P K  + F DVY+V ELMD +L Q+++ +  H RM
Sbjct:   47 QFYSVEVGDSTFTVLKRY-QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 166          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK10_HUMAN (Mitogen-activated protein kinase 10 OS=Homo sapiens GN=MAPK10 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD-QH*RM 648
            ++    V  + F V  +Y   ++PIG GA GIVCAA ++     VAIKK+   F N   A+R  RE+ L++ + H+N+I++ ++  P K  + F DVY+V ELMD +L Q+++ +  H RM
Sbjct:   47 QFYSVEVGDSTFTVLKRY-QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 166          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK09_CHICK (Mitogen-activated protein kinase 9 OS=Gallus gallus GN=MAPK9 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 46/121 (38.02%), Postives = 72/121 (59.50%), Query Frame = 1
Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD-QH*RM 648
            ++    V  + F V  +Y   ++PIG GA GIVCAA ++     VA+KK+   F N   A+R  RE+ LL+ + H+N+I++ ++  P K  + F DVY+V ELMD +L Q++  +  H RM
Sbjct:    9 QFYSVQVADSTFTVLKRY-QQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERM 128          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK08_DANRE (Mitogen-activated protein kinase 8 OS=Danio rerio GN=mapk8 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 44/115 (38.26%), Postives = 69/115 (60.00%), Query Frame = 1
Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD 633
            +Y   +V  + F V  +Y   +RPIG GA GIVC+A +      VAIKK+   F N   A+R  RE+ L++ + H+N+I + ++  P K  + F DVY+V ELMD +L Q+++ +
Sbjct:    9 EYYSIDVGDSTFTVLKRY-QNLRPIGSGAQGIVCSAYDHVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 122          
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MK08B_CYPCA (Mitogen-activated protein kinase 8B OS=Cyprinus carpio GN=mapk8b PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = 1
Query:  292 KYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKK-DTFNDVYIVYELMDTDLHQIVRSD 633
            ++   +V  + F V  +Y   +RPIG GA GIVC+A +      VAIKK+   F N   A+R  RE+ L++ + H+N+I + ++  P K  + F DVY+V ELMD +L Q+++ +
Sbjct:    9 EFYSVDVGDSTFTVLKRY-QNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 122          
The following BLAST results are available for this feature:
BLAST of FC868491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
MK08_XENLA8.793e-1638.46Mitogen-activated protein kinase 8 OS=Xenopus laev... [more]
MK08_MOUSE8.793e-1641.82Mitogen-activated protein kinase 8 OS=Mus musculus... [more]
MK08_HUMAN8.793e-1641.82Mitogen-activated protein kinase 8 OS=Homo sapiens... [more]
MK08A_CYPCA8.793e-1637.39Mitogen-activated protein kinase 8A OS=Cyprinus ca... [more]
MK10_RAT1.148e-1538.02Mitogen-activated protein kinase 10 OS=Rattus norv... [more]
MK10_MOUSE1.148e-1538.02Mitogen-activated protein kinase 10 OS=Mus musculu... [more]
MK10_HUMAN1.148e-1538.02Mitogen-activated protein kinase 10 OS=Homo sapien... [more]
MK09_CHICK1.148e-1538.02Mitogen-activated protein kinase 9 OS=Gallus gallu... [more]
MK08_DANRE1.148e-1538.26Mitogen-activated protein kinase 8 OS=Danio rerio ... [more]
MK08B_CYPCA1.148e-1537.39Mitogen-activated protein kinase 8B OS=Cyprinus ca... [more]

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Properties
Property NameValue
Genbank descriptionC31001A06EF AbioticL1 Citrus clementina cDNA clone C31001A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868491 ID=FC868491; Name=FC868491; organism=Citrus clementina; type=EST; length=702bp
CTTCCCGGGGACGGATTTTCAAACAAATTTCATTACCAAAGGTGTGGTTA
CGAGGCGCAAAAAGTTGTTGCTGCATTCAAATTTTCACATTCACAACACG
CTCTGGCAAGACCCAAATGCTCAAGCTCAACCAAACCGAGCAAGCTCAAC
TCTGATAAAACAGTAAACGGCCAGAAGCAGAGAAAAAGAGAACCCAGTTC
TGGGTTTTGAGTGAAAATGGCAGCAGCGGCGAAGGATTCGAGTTCAGGTG
GTGCGACTAGCAGTGTCAAAGGGGTGCTCACACATGGGGGTAAATACGTA
CAGTACAATGTTTACGGTAACCTTTTTGAGGTTTCTAGCAAGTATGTCCC
TCCCATTCGACCCATTGGTAGGGGTGCTTATGGCATTGTTTGCGCTGCTG
TAAATTCAGAGACACGCGAGGAGGTTGCCATTAAGAAGATCGGTAATGCA
TTTGACAACATAATAGATGCCAGAAGGACCTTGAGAGAAATTAAGCTTCT
TCGCCACATGGAGCATGAAAATGTCATCGCCATTAAGGATATCATTCGGC
CTCCCAAAAAGGACACCTTTAATGATGTATACATTGTTTATGAATTGATG
GACACTGATCTTCACCAGATAGTTCGCTCTGACCAACACTAACGGATGAT
CATTGTCAGTACTTTTTATATCAGTTGTTACGAGGATTTGAATATGTACA
TT
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