FC868498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: ERF3_DICDI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Dictyostelium discoideum GN=erf3 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.240e-44 Identity = 93/214 (43.46%), Postives = 137/214 (64.02%), Query Frame = 3 Query: 96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKS-HSCPISG---SRVTHD*EVYHLDWYRGPT 725 + H+NIV +GHVD+GKST +G ++ G +D + ++E+EA E ++ + YA+++D + ER +G T+++ FETTK T++DAPGHR ++ NMI G +QAD +L+I S G FEAG+ + GQT EHA LA +G+K ++ NKMD T K+SKARYDEI +++ +LKK G+ P+K H P SG V DWY GP+ Sbjct: 115 REHLNIVFLGHVDAGKSTLSGSIMVLTGQVDPHTLAKYEREAKENHREGWIYAYIMDTNEEERTKGKTVEVGRAHFETTKKRYTILDAPGHRLYVPNMIIGAAQADVGILVISSKKGEFEAGV-EGGQTIEHARLAKMIGIKYLVVFVNKMDEPTVKWSKARYDEITDKLTVHLKKCGWNPKKDFHFVPGSGYGTLNVLAPLAPGVCDWYSGPS 327
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EF1A_NATPD (Elongation factor 1-alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=tuf PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.240e-44 Identity = 95/217 (43.78%), Postives = 135/217 (62.21%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRGPT 725 M ++K H N+ VIGHVD GKST G L+++ G + + VIE++ +EA E K F++A+V+D L ERERG+TIDIA +F+T +YY T++D PGHRDF+KNMITG SQAD AVL++ + G QT+EH LA TLG+ ++I NKMD Y + +Y +V EV+ L++V + + P S G V+ E + WY GP+ Sbjct: 1 MSEDKPHQNLAVIGHVDHGKSTMVGRLLFETGSVPEHVIEQYREEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFDTDEYYFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VQPQTQEHVFLARTLGIDELIIAVNKMDLV--DYDENKYKAVVDEVNQLLEQVRFNTEDAKFIPTSAFEGDNVSEASE--NTSWYDGPS 206
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: ERF3_PICPI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Pichia pinus GN=SUP2 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.620e-44 Identity = 91/217 (41.94%), Postives = 133/217 (61.29%), Query Frame = 3 Query: 96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPISG-------SRVTHD*EVYHLDWYRGPT 725 K H++I+ +GHVD+GKST G+L++ G +DKR +E++E+EA + ++ + +W++D K ER G TI++ FET K T++DAPGH+ +I MI G SQAD VL+I S G +EAG + GQ+REHA+LA T GV +++ NKMD T +SK RY+E +++ YLK VGY P+SG RV+ WY GP+ Sbjct: 316 KDHMSIIFMGHVDAGKSTMGGNLLFLTGAVDKRTVEKYEREAKDAGRQGWYLSWIMDTNKEERNDGKTIEVGKSYFETDKRRYTILDAPGHKLYISEMIGGASQADVGVLVISSRKGEYEAGFERGGQSREHAILAKTQGVNKLVVVINKMDDPTVNWSKERYEECTTKLAMYLKGVGYQKGDVLFMPVSGYTGAGLKERVSQK----DAPWYNGPS 528
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: ERF3_CANMA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida maltosa GN=SUP35 PE=3 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.116e-44 Identity = 88/213 (41.31%), Postives = 130/213 (61.03%), Query Frame = 3 Query: 96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRGPT 725 K H++I+ +GHVD+GKST G+++Y G +DKR +E++E+EA + ++ + +WV+D K ER G TI++ FET K T++DAPGH+ ++ MI G SQAD +L+I + G +E G K GQTREHALLA T GV ++I NKMD T +SK RY E ++ +LK +GY + P+S G+ + WY GP+ Sbjct: 287 KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGKAYFETDKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGFEKGGQTREHALLAKTQGVNKIIVVVNKMDDPTVNWSKERYQECTTKLGVFLKGIGYNKDDIINMPVSGYTGAGLKDRVNPKDCPWYEGPS 499
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: ERF3_CANAL (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida albicans GN=SUP35 PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.116e-44 Identity = 88/213 (41.31%), Postives = 132/213 (61.97%), Query Frame = 3 Query: 96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRGPT 725 K H++I+ +GHVD+GKST G+++Y G +DKR +E++E+EA + ++ + +WV+D K ER G TI++ FET K T++DAPGH+ ++ MI G SQAD +L+I + G +E G K GQTREHALLA T GV ++I NKMD +T +SK RY E ++ ++LK +GY P+S G+ + + WY GP+ Sbjct: 290 KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGKAYFETDKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGFEKGGQTREHALLAKTQGVNKIIVVVNKMDDSTVGWSKERYQECTTKLGAFLKGIGYAKDDIIYMPVSGYTGAGLKDRVDPKDCPWYDGPS 502
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: HBS1_YEAST (Elongation factor 1 alpha-like protein OS=Saccharomyces cerevisiae GN=HBS1 PE=1 SV=2) HSP 1 Score: 178.718 bits (452), Expect = 2.763e-44 Identity = 88/211 (41.71%), Postives = 131/211 (62.09%), Query Frame = 3 Query: 102 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPISGSRVTHD*EVYHLD----WYRGP 722 H++ VV+GHVD+GKST G L+Y L +++ + + ++E+ M K SFK+AW++D+ ERERG+T+ I F T + T++DAPGHRDF+ N I G SQAD A+L +D +T FE+G DGQT+EH LLA +LG+ +I NKMD +S+ R++EI ++ YL +G+ + PISG ++ + D WY GP Sbjct: 167 HLSFVVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERGVTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDCSTNAFESGFDLDGQTKEHMLLASSLGIHNLIIAMNKMD--NVDWSQQRFEEIKSKLLPYLVDIGFFEDNINWVPISGFSGEGVYKIEYTDEVRQWYNGP 375
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: ERF3_SCHPO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Schizosaccharomyces pombe GN=sup35 PE=1 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 4.713e-44 Identity = 91/215 (42.33%), Postives = 134/215 (62.33%), Query Frame = 3 Query: 96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV-GYTPRKS-HSCPIS---GSRVTHD*EVYHLDWYRGPT 725 K H+NIV IGHVD+GKST G++++ G +DKR +E+ E+EA E K S+ +W LD ERE+G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+I + G FEAG + GQTREHA+LA T G+ ++ NKMD + ++S+ RY E V ++S +L++V GY + P+S G V + WY+GP+ Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAYTGQNVKDRVDSSVCPWYQGPS 450
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EF1A_NANEQ (Elongation factor 1-alpha OS=Nanoarchaeum equitans GN=tuf PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.040e-44 Identity = 99/217 (45.62%), Postives = 133/217 (61.29%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPISGSRVTHD*EVYHLD---WYRGPT 725 M +EK HIN+V IGHVD GKSTT G L Y LG I + +E+ +EA + K F +A+++D+ K ER RG+TIDIA + ET Y T++DAPGH+DF+KNMITG SQAD AVL++ + G E QT+EHA+LA T G+ Q+I NKMD Y + R++E+ +V LK +GY ++ I G+ D V D WY GPT Sbjct: 1 MPREKPHINVVFIGHVDHGKSTTVGRLKYDLGLIPESELEKIREEAKKYGKEEFVFAYLMDRQKEERARGVTIDIAHTELETPHNYITIVDAPGHKDFVKNMITGASQADAAVLVVAADDGVQE-------QTQEHAVLARTFGINQIIVYINKMDKV--NYDQKRFEEVKNQVLKLLKMIGYKD-ENIIAVIPGASFHGDNVVKKSDKMPWYNGPT 207
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EF1A_HALWD (Elongation factor 1-alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=tuf PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.371e-43 Identity = 94/214 (43.93%), Postives = 131/214 (61.21%), Query Frame = 3 Query: 93 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRGPT 725 +K H N+ +IGHVD GKST G L+++ G + + VIE+ +EA E K F++A+V+D L ERERG+TIDIA +F+T YY T++D PGHRDF+KNMITG SQAD AVL++ + G QTREH LA TLG+ ++I NKMD YS+ Y+++ EV LK+V + + PIS G V + + W+ GP+ Sbjct: 3 DKPHQNLAIIGHVDHGKSTLVGRLLFETGSVPEHVIEQHREEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFDTEDYYFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VAPQTREHVFLARTLGINELIIGVNKMDIV--DYSEETYEDVKTEVDKLLKQVQFNANDAKYIPISAFEGDNVAESSD--NTSWFDGPS 205
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: HBS1_SCHPO (Elongation factor 1 alpha-like protein OS=Schizosaccharomyces pombe GN=hbs1 PE=2 SV=4) HSP 1 Score: 176.022 bits (445), Expect = 1.791e-43 Identity = 94/214 (43.93%), Postives = 131/214 (61.21%), Query Frame = 3 Query: 96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYTPRKSHSCP---ISGSRVTHD*EVYHLDWYRGPT 725 K +++VV GHVDSGKST G ++++LG I+ R +++ EAA K SF YAW+LD + ER RG+T+D+A FE+ K + DAPGHRDFI MI G S AD AVL++DS+ FE G ++GQTREHA L LG+ +++ NK+D + +S+ R+ EI VS +L K VG+ H P ISG+ + WY+GPT Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLIQKDSSDLYKWYKGPT 386 The following BLAST results are available for this feature:
BLAST of FC868498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868498 ID=FC868498; Name=FC868498; organism=Citrus clementina; type=EST; length=728bpback to top |