FC868498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: ERF3_DEBHA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Debaryomyces hansenii GN=SUP35 PE=3 SV=4) HSP 1 Score: 174.096 bits (440), Expect = 6.806e-43 Identity = 84/213 (39.44%), Postives = 131/213 (61.50%), Query Frame = 3 Query: 96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRGPT 725 K H++I+ +GHVD+GKST G+++Y G +DKR ++++E+EA + ++ + +WV+D K ER G TI++ FET K T++DAPGH+ ++ MI G SQAD +L+I + G +E G K GQTREHALLA T GV ++I NKMD T +++ RY + + ++ ++LK +GY P+S G+ + WY GP+ Sbjct: 276 KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVDKYEREAKDAGRQGWYLSWVMDTNKEERSDGKTIEVGKAYFETEKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGFEKGGQTREHALLAKTQGVNKIIVVVNKMDDPTVGWAEDRYKDCITKLGTFLKGIGYAKDDIIFMPVSGYTGAGIKDRVNPKDCPWYSGPS 488
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EF1A_HALSA (Elongation factor 1-alpha OS=Halobacterium salinarium GN=tuf PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.161e-42 Identity = 95/214 (44.39%), Postives = 130/214 (60.75%), Query Frame = 3 Query: 93 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPISGSRVTHD*EVYHLD---WYRGPT 725 + H N+ VIGHVD GKST G L+Y+ G + + VIE+ ++EA E K F++A+V+D L ERERG+TIDIA +F T +Y T++D PGHRDF+KNMITG SQAD AVL++ + G QTREH L+ TLG+ ++I NKMD Y +++Y+E+V V +VG+ P + I+ S D H D WY GPT Sbjct: 3 DNRHQNLAVIGHVDHGKSTMVGRLLYETGSVPEHVIEQHKEEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFTTDEYEFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VAPQTREHVFLSRTLGIDELIVAVNKMDVV--DYDESKYNEVVSGVKDLFGQVGFNPDDAKF--IATSAFEGDNVSDHSDNTPWYDGPT 205
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EF1A_HALS3 (Elongation factor 1-alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tuf PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.161e-42 Identity = 95/214 (44.39%), Postives = 130/214 (60.75%), Query Frame = 3 Query: 93 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPISGSRVTHD*EVYHLD---WYRGPT 725 + H N+ VIGHVD GKST G L+Y+ G + + VIE+ ++EA E K F++A+V+D L ERERG+TIDIA +F T +Y T++D PGHRDF+KNMITG SQAD AVL++ + G QTREH L+ TLG+ ++I NKMD Y +++Y+E+V V +VG+ P + I+ S D H D WY GPT Sbjct: 3 DNRHQNLAVIGHVDHGKSTMVGRLLYETGSVPEHVIEQHKEEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFTTDEYEFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VAPQTREHVFLSRTLGIDELIVAVNKMDVV--DYDESKYNEVVSGVKDLFGQVGFNPDDAKF--IATSAFEGDNVSDHSDNTPWYDGPT 205
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EF1A_HALMA (Elongation factor 1-alpha OS=Haloarcula marismortui GN=tuf PE=1 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.516e-42 Identity = 91/212 (42.92%), Postives = 129/212 (60.85%), Query Frame = 3 Query: 93 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRG 719 ++ H N+ +IGHVD GKST G L+Y+ G + + VIE+ ++EA E K F++A+V+D L ERERG+TIDIA +F T Y T++D PGHRDF+KNMITG SQAD AVL++ + G QT+EH LA TLG+ ++I NKMD Y ++ Y ++V+EV L +V + + P+S G + + E H WY G Sbjct: 3 DEQHQNLAIIGHVDHGKSTLVGRLLYETGSVPEHVIEQHKEEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFSTDTYDFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VQPQTQEHVFLARTLGIGELIVAVNKMDLV--DYGESEYKQVVEEVKDLLTQVRFDSENAKFIPVSAFEGDNIAEESE--HTGWYDG 203
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EF1A_METKA (Elongation factor 1-alpha OS=Methanopyrus kandleri GN=tuf PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.189e-41 Identity = 95/217 (43.78%), Postives = 127/217 (58.53%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRGPT 725 M KEK HIN+ IGHVD GKST G L+Y G I+ + ++ + K+ ++D L+ ERERG+TID+A KFET Y T++D PGHRDF+KNMITG SQAD A+L++ + G QT+EHA LA TLG+ Q+I NKMD Y + RY+E+ +EV+ LK +GY + PIS G V + + WY GPT Sbjct: 1 MAKEKEHINLAFIGHVDHGKSTLVGRLLYDTGVIEDK----------DLGEGEDKFRVIMDTLEEERERGVTIDLAHTKFETDNYEFTIVDCPGHRDFVKNMITGASQADAAILVVAADDGVMP-------QTKEHAFLAKTLGIDQLIVAINKMDLV--DYDENRYEEVKQEVAELLKTIGYNVDEIPFIPISAFEGDNVVEKSD--NTPWYDGPT 196
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EF1A_METTH (Elongation factor 1-alpha OS=Methanobacterium thermoautotrophicum GN=tuf PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.370e-41 Identity = 93/217 (42.86%), Postives = 127/217 (58.53%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRGPT 725 M KEK H+N+ IGHVD GKST GHL+ + G I ++ + E K+ +V+D+L ERERG+TID+A KFET KY T++D PGHRDF+KNMITG SQAD AVL++ G QT+EH L+ TLG+ Q+I NKMD Y + +++ + EV++ +K VGY P P+S G +T E + WY+G T Sbjct: 1 MAKEKEHMNLAFIGHVDHGKSTLVGHLLLQAGAIAEQQLAEGED----------KFRFVMDRLSEERERGVTIDLAHAKFETDKYEFTIVDCPGHRDFVKNMITGASQADAAVLVVAVDDGVMP-------QTKEHVFLSRTLGINQLIVAINKMDLV--NYDEEKFNALKDEVAALIKTVGYKPSDVEFIPLSAFEGDNITSKSE--NTPWYKGKT 196
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EF1A_METST (Elongation factor 1-alpha OS=Methanosphaera stadtmanae (strain DSM 3091) GN=tuf PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.087e-40 Identity = 93/217 (42.86%), Postives = 130/217 (59.91%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRGPT 725 M KEKTH+N+ IGHVD GKST GHL+ G I ++ ++ E K+ +V+DKL ERERG+TID+A KFET KY TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMD YS+ +++E+ +E+ + + VG+ P P+S G ++ + + WY+G T Sbjct: 1 MAKEKTHMNLAFIGHVDHGKSTLVGHLLLLEGAIAEQQLDEGED----------KFRFVMDKLGEERERGVTIDLAHAKFETQKYEYTVVDCPGHRDFVKNMITGASQADAAVLVVAANDGIMP-------QTKEHIFLSRTLGINQLIIAINKMDVV--DYSEDKFNELKEELGALISTVGFKPSDVPFIPVSAFEGDNISE--KSSNTPWYKGNT 196
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EF1A_METS3 (Elongation factor 1-alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=tuf PE=3 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 2.421e-40 Identity = 92/215 (42.79%), Postives = 126/215 (58.60%), Query Frame = 3 Query: 84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPISGSRVTHD*EVY-HLDWYRGPT 725 M K K HIN+ IGHVD GKST GHL+ K G I ++ ++ E K+ +V+DKL ERERG+TID+A KF T KY TV+D PGHRDF+KNMITG SQAD VL++ + G QT+EH L+ TLG+ Q+I NK+D Y +A+++E+ EVS+ +K VG+ P P+S + + + WY+G T Sbjct: 1 MAKTKEHINLAFIGHVDHGKSTLVGHLLLKAGAIAEQQLDDGEN----------KFRFVMDKLGEERERGVTIDLAHQKFSTKKYDYTVVDCPGHRDFVKNMITGASQADAGVLVVAADDGVMP-------QTKEHVFLSKTLGINQLIVAINKIDLV--DYDEAKFNELKDEVSALIKTVGFNPADVPFIPVSAFEGDNIKDASPNTSWYKGDT 196
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EF1A_ENCCU (Elongation factor 1-alpha OS=Encephalitozoon cuniculi GN=TEF1 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.787e-39 Identity = 86/211 (40.76%), Postives = 129/211 (61.14%), Query Frame = 3 Query: 96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRG 719 K +N IGHVDSGKSTT G L Y+LG +DKR +E++EKEAA NK +F A++ DK AER+RGITI L T K+ ++D PGH+DF+KNM+TG SQAD AV+I+ ++ GFE+ + G + H +++ LG +++I C NKMD +++E+ E+ +K+ + + PIS G +T E + +W++G Sbjct: 44 KPRLNACFIGHVDSGKSTTVGMLSYQLGAVDKREMEKYEKEAALNNKETFYLAYLTDKTDAERKRGITITTTLVNLPTEKFNINILDCPGHKDFVKNMVTGASQADVAVVIVPAS--GFESCVGVGGMLKTHIMISGILGCEKLIVCVNKMDEIPENKRMEKFNEVSAEMLRIVKR-SHKDKNPIIIPISAFKGINLTKKGEKF--EWFKG 249
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EF1A_EIMBO (Elongation factor 1-alpha (Fragment) OS=Eimeria bovis PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27 Identity = 66/110 (60.00%), Postives = 78/110 (70.91%), Query Frame = 3 Query: 396 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP-KYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPISGSRVTHD*E-VYHLDWYRG 719 GTSQAD A+L++ + GGFE SK+GQTREHALLAFTLGVKQMI NKMDATTP KYS+ R++EI EVS YLK VGY P K PISG + E ++ WY+G Sbjct: 1 GTSQADVALLVVPADQGGFEGAFSKEGQTREHALLAFTLGVKQMIVGINKMDATTPDKYSETRFNEIQAEVSRYLKTVGYNPEKVPFVPISGFMGDNMVERSSNMPWYKG 110 The following BLAST results are available for this feature:
BLAST of FC868498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868498 ID=FC868498; Name=FC868498; organism=Citrus clementina; type=EST; length=728bpback to top |