FC868498

Overview
NameFC868498
Unique NameFC868498
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: CYSN_RHIME (Sulfate adenylyltransferase subunit 1 OS=Rhizobium meliloti GN=cysN PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.166e-26
Identity = 75/212 (35.38%), Postives = 113/212 (53.30%), Query Frame = 3
Query:  105 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAA-EMNKRSFK-YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRGPT 725
            + ++  G VD GKST  G L++    + +      +++++ + N      +A +LD L+AERE+GITID+A   F T K    V D PGH  + +NM TG S AD AVL++D+  G  E       QTR HA +A  +G++Q +   NK+D T   Y +AR+D+I  E       +G   R+  + P+S   G  V +D     + WY GPT
Sbjct:   33 LRLITCGSVDDGKSTLIGRLLWDTKAVKEDQAASLQRDSSGKQNDLGLPDFALLLDGLQAEREQGITIDVAYRYFATDKRSFIVADTPGHEQYTRNMATGASTADLAVLLVDARVGLLE-------QTRRHATIATLMGIRQFVLAVNKIDLT--NYDRARFDQISHEFRELALSLGV--RQVTAIPVSALKGENVVYDGRA-SMPWYDGPT 232          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: CYSN_AGRT5 (Sulfate adenylyltransferase subunit 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=cysN PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.560e-26
Identity = 72/218 (33.03%), Postives = 113/218 (51.83%), Query Frame = 3
Query:   84 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFK-YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRGPT 725
            + ++   + ++  G VD GKST  G L++    + +       +++ + N      +A +LD L+AERE+GITID+A   F T +    V D PGH  + +NM TG S AD AVL++D+ TG  E       QTR HA +A  +G++Q +   NK+D T   Y KA ++ I  E   +   +G   ++  + P+S   G  V    +   + WY GPT
Sbjct:   24 VARDTRPLRLITCGSVDDGKSTLIGRLLWDTKAVKEDQAATLHRDSGKQNDLGLPDFALLLDGLQAEREQGITIDVAYRYFATDRRAFIVADTPGHEQYTRNMATGASTADLAVLLVDARTGILE-------QTRRHATIAALMGIRQFVLAVNKIDLT--NYDKAGFELIAHEFRDFASDLGI--KQITAIPMSALKGENVVLSGKA-SMPWYEGPT 229          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: CYSN_BACTN (Sulfate adenylyltransferase subunit 1 OS=Bacteroides thetaiotaomicron GN=cysN PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.290e-25
Identity = 64/182 (35.16%), Postives = 101/182 (55.49%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRS--FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG 629
            ++K  + ++  G VD GKST  G L++    + +  ++  E+++  +        YA +LD LKAERE+GITID+A   F T      + D PGH  + +NMITG S A+ A++++D+ TG          QTR H  L   LG+K ++   NKMD     +S+ R+DEIV E   +++ +G
Sbjct:   15 EQKDLLRLLTAGSVDDGKSTLIGRLLFDSKKLYEDQLDALERDSKRVGNAGEHIDYALLLDGLKAEREQGITIDVAYRYFSTNGRKFIIADTPGHEQYTRNMITGGSTANLAIILVDARTGVIT-------QTRRHTFLVSLLGIKHVVLAVNKMDLV--DFSEERFDEIVSEYKKFVEPLG 187          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: CYSN_RHITR (Sulfate adenylyltransferase subunit 1 OS=Rhizobium tropici GN=cysN PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 8.358e-25
Identity = 72/212 (33.96%), Postives = 112/212 (52.83%), Query Frame = 3
Query:  105 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAA-EMNKRSFK-YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRGPT 725
            + ++  G VD GKST  G L++    + +      ++++  + N      +A +LD L+AERE+GITID+A   F T K    V D PGH  + +NM TG S AD AVL++D+  G  E       QTR HA +A  LG+KQ +   NK+D T   Y +A +++I  +   +   +G   ++  + P+S   G  V +  +   + WY GPT
Sbjct:   27 LRLITCGSVDDGKSTLIGRLLWDTKAVKEDQAATLQRDSTGKQNDLGLPDFALLLDGLQAEREQGITIDVAYRYFSTDKRSFIVADTPGHEQYTRNMATGASTADLAVLLVDARMGILE-------QTRRHATIASLLGIKQFVLAINKIDLT--NYDRAGFEKISHDFREFALSLGV--KQITAIPMSALKGENVVYSGQA-AMPWYTGPT 226          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: NODQ_RHIME (Bifunctional enzyme nodQ OS=Rhizobium meliloti GN=nodQ PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.092e-24
Identity = 75/220 (34.09%), Postives = 115/220 (52.27%), Query Frame = 3
Query:   96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEM---------NKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRG 719
            K+ +  +  G VD GKST  G L+Y     D +++  FE + A +         N +    A +LD L+AERE+GITID+A   F T+K    V D PGH ++ +NM+TG S AD A+++IDS  G  +       QTR H+ +A  LG++ ++   NK+D     + +  Y+EIV +  ++ K++G+        PIS   G  V       +  WYRG
Sbjct:   22 KSILRFITCGSVDDGKSTLIGRLLY-----DAKLV--FEDQLANLGRVGSPGAANGKEIDLALLLDGLEAEREQGITIDVAYRYFATSKRKFIVADTPGHEEYTRNMVTGASTADLAIILIDSRQGILQ-------QTRRHSYIASLLGIRHVVLAVNKIDLV--DFKQQVYEEIVADYMAFAKELGFA--SIRPIPISARDGDNVIS--ASANTPWYRG 221          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: CYSN_AGRRK (Sulfate adenylyltransferase subunit 1 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=cysN PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.426e-24
Identity = 71/212 (33.49%), Postives = 111/212 (52.36%), Query Frame = 3
Query:  105 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAA-EMNKRSFK-YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRGPT 725
            + ++  G VD GKST  G L++    + +      ++++  + N      +A +LD L+AERE+GITID+A   F T      V D PGH  + +NM TG S AD A+L+ID+  G  E       QTR HA +A  LG+KQ +   NK+D T   Y +A +++I  +   +   +G   ++  + P+S   G  V +  +   + WY GPT
Sbjct:   27 LRLITCGSVDDGKSTLIGRLLWDTKAVKEDQAATLQRDSTGKQNDLGLPDFALLLDGLQAEREQGITIDVAYRYFSTDNRSFIVADTPGHEQYTRNMATGASTADLAILLIDARLGILE-------QTRRHATIASLLGIKQFVLAVNKIDLT--NYDRAGFEKIAHDFREFALSLGV--KQITAIPMSALKGENVVYSGQA-AMPWYNGPT 226          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: CYSN_BACFR (Sulfate adenylyltransferase subunit 1 OS=Bacteroides fragilis GN=cysN PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.432e-24
Identity = 62/182 (34.07%), Postives = 99/182 (54.40%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRS--FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG 629
            ++K  + ++  G VD GKST  G L++    + +  ++  E+++  +        YA +LD LKAERE+GITID+A   F T      + D PGH  + +NMITG S A+ A++++D+  G          QTR H  L   LG+K ++   NKMD     +S+ R++EIV E   ++  +G
Sbjct:   15 EQKDLLRLLTAGSVDDGKSTLIGRLLFDSKKLYEDQLDALERDSKRLGNAGEHIDYALLLDGLKAEREQGITIDVAYRYFSTNNRKFIIADTPGHEQYTRNMITGGSTANLAIILVDARMGVIT-------QTRRHTFLVSLLGIKHVVLAVNKMDLV--DFSEERFNEIVAEYKKFVAPLG 187          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: CYSN_BACFN (Sulfate adenylyltransferase subunit 1 OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=cysN PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.432e-24
Identity = 62/182 (34.07%), Postives = 99/182 (54.40%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRS--FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG 629
            ++K  + ++  G VD GKST  G L++    + +  ++  E+++  +        YA +LD LKAERE+GITID+A   F T      + D PGH  + +NMITG S A+ A++++D+  G          QTR H  L   LG+K ++   NKMD     +S+ R++EIV E   ++  +G
Sbjct:   15 EQKDLLRLLTAGSVDDGKSTLIGRLLFDSKKLYEDQLDALERDSKRLGNAGEHIDYALLLDGLKAEREQGITIDVAYRYFSTNNRKFIIADTPGHEQYTRNMITGGSTANLAIILVDARMGVIT-------QTRRHTFLVSLLGIKHVVLAVNKMDLV--DFSEERFNEIVAEYKKFVAPLG 187          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: NODQ_RHISB (Bifunctional enzyme nodQ OS=Rhizobium sp. (strain BR816) GN=nodQ PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.176e-24
Identity = 73/221 (33.03%), Postives = 116/221 (52.49%), Query Frame = 3
Query:   96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEM---------NKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPIS---GSRVTHD*EVYHLDWYRGP 722
            K+ +  +  G VD GKST  G L+     +D +++  FE +   +         N      A +LD L+AERE+GITID+A   F T+K    V D PGH ++ +NM+TG S AD AV++IDS  G  +       QTR H+ +A  LG++ ++   NK+D    ++ ++ +DEI ++  ++ KK+G+        PI+   G  V       +  WY+GP
Sbjct:   22 KSVLRFITCGSVDDGKSTLIGRLL-----VDAKLV--FEDQLTNLGRVGSSGAVNGGEIDLALLLDGLEAEREQGITIDVAYRYFATSKRKFIVADTPGHEEYTRNMVTGASTADLAVILIDSRQGILQ-------QTRRHSYIASLLGIRHVVLAVNKIDLV--EFRQSVFDEIARDYKAFAKKLGFA--SIQPIPIAARFGDNVIS--ASPNTPWYKGP 222          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: CYSN_SHEWM (Sulfate adenylyltransferase subunit 1 OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=cysN PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.176e-24
Identity = 71/215 (33.02%), Postives = 110/215 (51.16%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKR--SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTP-RKSHSCPISGSRVTHD*EVYHLDWYRGPT 725
            + K  + ++  G VD GKST  G L++    I +  +   EK++   N    SF  A ++D L++ERE+GITID+A   F T +    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +   LG+K +I   NKMDA    Y +A Y +I KE   + + + ++  R      + G  V +  E  ++ WY G T
Sbjct:   20 ENKDMLRVLTCGSVDDGKSTLIGRLLFDSKMIFEDQMAAIEKDSKRFNTTDDSFDLALLVDGLQSEREQGITIDVAYRYFTTEQRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARHG-------VQVQTRRHSFICSQLGIKHVIIAINKMDAI--DYDQATYQKIKKEYREFAEDLSFSDVRFVPISALKGDNVVN--ESPNMTWYPGST 223          
The following BLAST results are available for this feature:
BLAST of FC868498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_RHIME1.166e-2635.38Sulfate adenylyltransferase subunit 1 OS=Rhizobium... [more]
CYSN_AGRT57.560e-2633.03Sulfate adenylyltransferase subunit 1 OS=Agrobacte... [more]
CYSN_BACTN1.290e-2535.16Sulfate adenylyltransferase subunit 1 OS=Bacteroid... [more]
CYSN_RHITR8.358e-2533.96Sulfate adenylyltransferase subunit 1 OS=Rhizobium... [more]
NODQ_RHIME1.092e-2434.09Bifunctional enzyme nodQ OS=Rhizobium meliloti GN=... [more]
CYSN_AGRRK1.426e-2433.49Sulfate adenylyltransferase subunit 1 OS=Agrobacte... [more]
CYSN_BACFR2.432e-2434.07Sulfate adenylyltransferase subunit 1 OS=Bacteroid... [more]
CYSN_BACFN2.432e-2434.07Sulfate adenylyltransferase subunit 1 OS=Bacteroid... [more]
NODQ_RHISB3.176e-2433.03Bifunctional enzyme nodQ OS=Rhizobium sp. (strain ... [more]
CYSN_SHEWM3.176e-2433.02Sulfate adenylyltransferase subunit 1 OS=Shewanell... [more]

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Properties
Property NameValue
Genbank descriptionC31001B02EF AbioticL1 Citrus clementina cDNA clone C31001B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868498 ID=FC868498; Name=FC868498; organism=Citrus clementina; type=EST; length=728bp
GACTCTTTGCCCTCCCTCTTTTCTTGCTTGCTCTGCGGCTAGGTTTCAAT
TGTCTCTTCGAAGTTTCAGTTAATTTAACAGCCATGGGTAAGGAGAAGAC
TCACATCAACATTGTGGTGATTGGCCATGTCGACTCTGGAAAGTCGACCA
CCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATC
GAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAGTA
CGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCA
TTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTC
ATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTAC
CTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCGGTGGTT
TTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTT
GCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGA
CGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGG
AGGTCTCTTCCTACCTGAAGAAGGTTGGATACACCCCGAGAAAGTCCCAT
TCGTGCCCNATCTCTGGTTCGAGGGTGACACATGATTGAGAGGTCTACCA
CCTTGACTGGTACAGGGGTCCAACCTGC
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