FC868498

Overview
NameFC868498
Unique NameFC868498
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU1_THET8 (Elongation factor Tu-A OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=tufA PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 5.607e-21
Identity = 61/154 (39.61%), Postives = 82/154 (53.25%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551
            + K H+N+  IGHVD GK+T T  L Y                AAE      K    +DK   ER RGITI+ A  ++ET K + + +D PGH D+IKNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK+D
Sbjct:    8 RTKPHVNVGTIGHVDHGKTTLTAALTYVA--------------AAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFMNKVD 140          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: CYSN_VIBPA (Sulfate adenylyltransferase subunit 1 OS=Vibrio parahaemolyticus GN=cysN PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.607e-21
Identity = 63/177 (35.59%), Postives = 94/177 (53.11%), Query Frame = 3
Query:   96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFK--YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLK 620
            K+ +  +  G VD GKST  G L++    I +  +     ++  +     K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV+++D+  G  +       QTR H+ ++  LG+K  +   NKMD     YS+AR++EI  E   YLK
Sbjct:   24 KSLLRFLTCGSVDDGKSTLIGRLLHDSKQIYEDQLAAVHSDSQRVGTTGEKPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCDLAVILVDARKGILD-------QTRRHSFISNLLGLKHFVVAINKMDLV--DYSQARFEEIRDE---YLK 188          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: CYSN_SHIDS (Sulfate adenylyltransferase subunit 1 OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=cysN PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.607e-21
Identity = 69/219 (31.51%), Postives = 105/219 (47.95%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTP-----RKSHSCPISGSRVTHD*EVYHLDWYRGPT 725
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++   YL   G  P     R      + G  V    E   + WY GPT
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLM--DYSEETFTRIRED---YLTFAGQLPGNLDIRFVPLSALEGDNVASQSE--SMPWYSGPT 227          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: CYSN_ECOLU (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.607e-21
Identity = 69/219 (31.51%), Postives = 105/219 (47.95%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTP-----RKSHSCPISGSRVTHD*EVYHLDWYRGPT 725
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++   YL   G  P     R      + G  V    E   + WY GPT
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--GYSEETFTRIRED---YLTFAGQLPGNLDIRFVPLSALEGDNVASQSE--SMPWYSGPT 227          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: CYSN_ECOLC (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=cysN PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.607e-21
Identity = 69/219 (31.51%), Postives = 105/219 (47.95%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTP-----RKSHSCPISGSRVTHD*EVYHLDWYRGPT 725
            + K+ +  +  G VD GKST  G L++    I +  +     ++     +  K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++   YL   G  P     R      + G  V    E   + WY GPT
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEKTFTRIRED---YLTFAGQLPGNLDIRFVPLSALEGDNVASQSE--SMAWYSGPT 227          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_STRPM (Elongation factor Tu OS=Streptococcus pyogenes serotype M28 GN=tuf PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 7.322e-21
Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551
            + K H+NI  IGHVD GK+T T  +          V+ R    +    K    YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSSVNQPK---DYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVD 142          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_STRPG (Elongation factor Tu OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=tuf PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.322e-21
Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551
            + K H+NI  IGHVD GK+T T  +          V+ R    +    K    YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSSVNQPK---DYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVD 142          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_STRPF (Elongation factor Tu OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=tuf PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 7.322e-21
Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551
            + K H+NI  IGHVD GK+T T  +          V+ R    +    K    YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSSVNQPK---DYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVD 142          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_STRPD (Elongation factor Tu OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=tuf PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 7.322e-21
Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551
            + K H+NI  IGHVD GK+T T  +          V+ R    +    K    YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSSVNQPK---DYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVD 142          
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_STRPC (Elongation factor Tu OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=tuf PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 7.322e-21
Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551
            + K H+NI  IGHVD GK+T T  +          V+ R    +    K    YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSSVNQPK---DYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVD 142          
The following BLAST results are available for this feature:
BLAST of FC868498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU1_THET85.607e-2139.61Elongation factor Tu-A OS=Thermus thermophilus (st... [more]
CYSN_VIBPA5.607e-2135.59Sulfate adenylyltransferase subunit 1 OS=Vibrio pa... [more]
CYSN_SHIDS5.607e-2131.51Sulfate adenylyltransferase subunit 1 OS=Shigella ... [more]
CYSN_ECOLU5.607e-2131.51Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECOLC5.607e-2131.51Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
EFTU_STRPM7.322e-2141.56Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_STRPG7.322e-2141.56Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_STRPF7.322e-2141.56Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_STRPD7.322e-2141.56Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_STRPC7.322e-2141.56Elongation factor Tu OS=Streptococcus pyogenes ser... [more]

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Properties
Property NameValue
Genbank descriptionC31001B02EF AbioticL1 Citrus clementina cDNA clone C31001B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868498 ID=FC868498; Name=FC868498; organism=Citrus clementina; type=EST; length=728bp
GACTCTTTGCCCTCCCTCTTTTCTTGCTTGCTCTGCGGCTAGGTTTCAAT
TGTCTCTTCGAAGTTTCAGTTAATTTAACAGCCATGGGTAAGGAGAAGAC
TCACATCAACATTGTGGTGATTGGCCATGTCGACTCTGGAAAGTCGACCA
CCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATC
GAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAGTA
CGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCA
TTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTC
ATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTAC
CTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCGGTGGTT
TTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTT
GCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGA
CGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGG
AGGTCTCTTCCTACCTGAAGAAGGTTGGATACACCCCGAGAAAGTCCCAT
TCGTGCCCNATCTCTGGTTCGAGGGTGACACATGATTGAGAGGTCTACCA
CCTTGACTGGTACAGGGGTCCAACCTGC
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