FC868498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_PICGU (Elongation factor Tu, mitochondrial OS=Pichia guilliermondii GN=TUF1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20 Identity = 58/157 (36.94%), Postives = 83/157 (52.87%), Query Frame = 3 Query: 81 AMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551 A + K H+NI IGHVD GK+T T + K +E +F +D+ ER RGITI A +++T K + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV+ ++ NK+D Sbjct: 29 AFDRSKPHVNIGTIGHVDHGKTTLTAAIT---------------KVLSEKGGANFLDYGSIDRAPEERARGITISTAHVEYQTDKRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGQMP-------QTREHLLLARQVGVQHLVVFVNKVD 163
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_MYCVP (Elongation factor Tu OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20 Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551 + K H+NI IGHVD GK+T T I K + +++ ++N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----DLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKAD 141
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_MYCPA (Elongation factor Tu OS=Mycobacterium paratuberculosis GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20 Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551 + K H+NI IGHVD GK+T T I K + +++ ++N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----DLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKAD 141
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_MYCA1 (Elongation factor Tu OS=Mycobacterium avium (strain 104) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20 Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551 + K H+NI IGHVD GK+T T I K + +++ ++N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----DLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKAD 141
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_LACRJ (Elongation factor Tu OS=Lactobacillus reuteri (strain JCM 1112) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20 Identity = 62/154 (40.26%), Postives = 86/154 (55.84%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551 + K H+NI IGHVD GK+T T + L AA+ ++ YA + D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK D Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITKVL--------------AAKGLAKAEDYADI-DAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVQYIVVFLNKTD 140
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_LACRD (Elongation factor Tu OS=Lactobacillus reuteri (strain DSM 20016) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20 Identity = 62/154 (40.26%), Postives = 86/154 (55.84%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551 + K H+NI IGHVD GK+T T + L AA+ ++ YA + D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK D Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITKVL--------------AAKGLAKAEDYADI-DAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVQYIVVFLNKTD 140
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_GLOVI (Elongation factor Tu OS=Gloeobacter violaceus GN=tufA PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20 Identity = 54/154 (35.06%), Postives = 83/154 (53.90%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551 + K H+NI IGHVD GK+T T + L + + +++++ +D+ E+ RGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITMTLAALGRAKAKKYDE---------------IDQAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPNIVVFLNKKD 139
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_EXIS2 (Elongation factor Tu OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20 Identity = 60/161 (37.27%), Postives = 85/161 (52.80%), Query Frame = 3 Query: 84 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551 MGKEK H+N+ IGHVD GK+T T + L + +F++ +D ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LL+ +GV ++ NK+D Sbjct: 1 MGKEKFDRSKPHVNVGTIGHVDHGKTTLTAAISAVLAKSQGKAATKFDQ---------------IDGAPEERERGITIATAHIEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGPMP-------QTREHILLSRQVGVPFIVVFMNKVD 139
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_EIMTE (Elongation factor Tu, apicoplast OS=Eimeria tenella GN=tufA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20 Identity = 59/154 (38.31%), Postives = 82/154 (53.25%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551 K KTH+NI IGHVD GK+T T + L I+ + + + +D E+ RGITI+ + ++ET + ID PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV +I NK+D Sbjct: 8 KTKTHLNIGTIGHVDHGKTTLTAAITSYLSKINNTKAKSYSE---------------IDSAPEEKARGITINTSHIEYETNLRHYAHIDCPGHADYIKNMITGAAQMDGAILVVSATDGPMP-------QTREHLLLAKQVGVPNIIVFLNKID 139
BLAST of FC868498 vs. ExPASy Swiss-Prot
Match: EFTU_CHLTB (Elongation factor Tu OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20 Identity = 63/191 (32.98%), Postives = 96/191 (50.26%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTPRKSHSCPI 662 + K HINI IGHVD GK+T T + L G F+ +D E+ RGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + ++ D + E++ L++ GY CPI Sbjct: 8 RNKPHINIGTIGHVDHGKTTLTAAITRTLSGD---------------GLADFRDYSSIDNTPEEKARGITINASHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVFLNKIDMISEEDAEL-VDLVEMELAELLEEKGY-----KGCPI 170 The following BLAST results are available for this feature:
BLAST of FC868498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868498 ID=FC868498; Name=FC868498; organism=Citrus clementina; type=EST; length=728bpback to top |