FC868503

Overview
NameFC868503
Unique NameFC868503
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13179 contig Ccv1_Contig13179:32..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 8.188e-54
Identity = 94/167 (56.29%), Postives = 111/167 (66.47%), Query Frame = 2
Query:  113 VEVAEQQGGSGEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNR 613
            +  A Q  G+G+   KDY +PPPAPL +  EL  WSFYRA IAEF+A            +G         +T +C  VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ Y++ QCLGAICG G VK FQ+  Y   GGGAN +A GY +
Sbjct:   21 IGTAAQGAGAGD-DDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSK------STSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTK 180          

HSP 2 Score: 45.8246 bits (107), Expect = 8.188e-54
Identity = 20/24 (83.33%), Postives = 23/24 (95.83%), Query Frame = 1
Query:  610 QGTGLGAEIIGTFVLVYTVFSATD 681
            +G GLGAEI+GTF+LVYTVFSATD
Sbjct:  180 KGDGLGAEIVGTFILVYTVFSATD 203          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.189e-54
Identity = 92/152 (60.53%), Postives = 104/152 (68.42%), Query Frame = 2
Query:  158 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNR 613
            KDY +PPPAPL + EEL  WSFYRA IAEF+A            +G         ++ +C  VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL YMV QCLGAICG G VK FQ+  Y   GGGAN +  GY +
Sbjct:   31 KDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGVSK------SSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTK 176          

HSP 2 Score: 46.2098 bits (108), Expect = 8.189e-54
Identity = 21/24 (87.50%), Postives = 23/24 (95.83%), Query Frame = 1
Query:  610 QGTGLGAEIIGTFVLVYTVFSATD 681
            +G GLGAEI+GTFVLVYTVFSATD
Sbjct:  176 KGDGLGAEIVGTFVLVYTVFSATD 199          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 4.019e-53
Identity = 91/157 (57.96%), Postives = 105/157 (66.88%), Query Frame = 2
Query:  143 GEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNR 613
            G    KDY +PPPAPL +  EL  WSFYRA IAEF+A            +G         +T +C  VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL Y++ QCLGA+CG G VK FQ+  Y   GGGAN +A GY +
Sbjct:   27 GAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSK------STSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTK 177          

HSP 2 Score: 45.8246 bits (107), Expect = 4.019e-53
Identity = 20/24 (83.33%), Postives = 23/24 (95.83%), Query Frame = 1
Query:  610 QGTGLGAEIIGTFVLVYTVFSATD 681
            +G GLGAEI+GTF+LVYTVFSATD
Sbjct:  177 KGDGLGAEIVGTFILVYTVFSATD 200          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.161e-52
Identity = 90/152 (59.21%), Postives = 104/152 (68.42%), Query Frame = 2
Query:  158 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNR 613
            KDY +PPPAPL +  EL  WSFYRA IAEF+A            +G         ++ +C  VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ Y+V QCLGAICG G VK FQ+  Y   GGGAN +A GY +
Sbjct:   32 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSK------SSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTK 177          

HSP 2 Score: 45.8246 bits (107), Expect = 1.161e-52
Identity = 20/24 (83.33%), Postives = 23/24 (95.83%), Query Frame = 1
Query:  610 QGTGLGAEIIGTFVLVYTVFSATD 681
            +G GLGAEI+GTF+LVYTVFSATD
Sbjct:  177 KGDGLGAEIVGTFILVYTVFSATD 200          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 1.161e-52
Identity = 94/181 (51.93%), Postives = 113/181 (62.43%), Query Frame = 2
Query:   77 QNKNKREKMGKDVEVAEQQGGSGEFSA--KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNR 613
            + K +  ++G +     Q  G+    A  KDY +PP AP+ + EEL  WSFYRA IAEF+A            +G       N +  +C  VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YM  QCLGAICG G VK FQ+  Y   GGGAN +  GY +
Sbjct:    2 EGKEEDVRLGANRYTERQPIGTAAQGAEEKDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGV------NKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTK 176          

HSP 2 Score: 46.2098 bits (108), Expect = 1.161e-52
Identity = 21/24 (87.50%), Postives = 23/24 (95.83%), Query Frame = 1
Query:  610 QGTGLGAEIIGTFVLVYTVFSATD 681
            +G GLGAEI+GTFVLVYTVFSATD
Sbjct:  176 KGDGLGAEIVGTFVLVYTVFSATD 199          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 7.425e-52
Identity = 94/159 (59.12%), Postives = 109/159 (68.55%), Query Frame = 2
Query:  137 GSGEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQ-KSYYNRYGGGANELADGYN 610
            GSG  + KDY DPPPAPL+D  ELGKWS YRA IAEF A            IG K Q+         GG G+LGIAWAFGG+IF+LVYCTAGISGGH+NPAVTF + L R+VSL RA LY +AQC+GA+CG G  +A      Y R+GGGANELA GY+
Sbjct:    6 GSGS-NPKDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQSGE-------GGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYS 156          

HSP 2 Score: 40.4318 bits (93), Expect = 7.425e-52
Identity = 18/23 (78.26%), Postives = 21/23 (91.30%), Query Frame = 1
Query:  613 GTGLGAEIIGTFVLVYTVFSATD 681
            G G+ AE++GTFVLVYTVFSATD
Sbjct:  158 GAGVVAEMVGTFVLVYTVFSATD 180          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.261e-51
Identity = 87/160 (54.37%), Postives = 105/160 (65.62%), Query Frame = 2
Query:  134 GGSGEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNR 613
            G + +   +DY +PP APL +  EL  WSFYRA IAEF+A            +G         +  +CG VGI GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGL L RK+SL RA+ Y+V QCLGA+CG G VKAF  + Y   GGGAN ++ GY +
Sbjct:   29 GTAADDLGRDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSK------SPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTK 182          

HSP 2 Score: 45.8246 bits (107), Expect = 1.261e-51
Identity = 20/24 (83.33%), Postives = 23/24 (95.83%), Query Frame = 1
Query:  610 QGTGLGAEIIGTFVLVYTVFSATD 681
            +G GLGAE++GTFVLVYTVFSATD
Sbjct:  182 KGDGLGAEVVGTFVLVYTVFSATD 205          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 6.720e-50
Identity = 90/153 (58.82%), Postives = 102/153 (66.67%), Query Frame = 2
Query:  158 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQ-KSYYNRYGGGANELADGYNR 613
            KDY +PPPAPL +  EL  WSFYRA IAEFIA            +G   ++       +C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YMV Q LGAICG G VK F+ K  +    GGAN +A GY +
Sbjct:   32 KDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESS------KCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTK 178          

HSP 2 Score: 45.8246 bits (107), Expect = 6.720e-50
Identity = 20/24 (83.33%), Postives = 23/24 (95.83%), Query Frame = 1
Query:  610 QGTGLGAEIIGTFVLVYTVFSATD 681
            +G GLGAEI+GTF+LVYTVFSATD
Sbjct:  178 KGDGLGAEIVGTFILVYTVFSATD 201          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.346e-47
Identity = 85/152 (55.92%), Postives = 99/152 (65.13%), Query Frame = 2
Query:  158 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNR 613
            KDY +PPPAPL +  EL  WSFYR  IAEF+A            +G         +T +C  VGI GIAW+FGGMI  LVYCTAGISG HINPAVTFGLFL RK+SL RA+ Y++ QCLGAICG G VK FQ+  Y   GG  N +A GY +
Sbjct:   31 KDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSK------STSKCATVGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTK 175          

HSP 2 Score: 45.8246 bits (107), Expect = 1.346e-47
Identity = 20/24 (83.33%), Postives = 23/24 (95.83%), Query Frame = 1
Query:  610 QGTGLGAEIIGTFVLVYTVFSATD 681
            +G GLGAEI+GTF+LVYTVFSATD
Sbjct:  175 KGDGLGAEIVGTFILVYTVFSATD 198          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 187.193 bits (474), Expect = 6.887e-47
Identity = 95/152 (62.50%), Postives = 105/152 (69.08%), Query Frame = 2
Query:  158 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNR 613
            KDY +PPPAPL +  EL  WSFYRA IAEF+A            +G       N +T +C  VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL YMV QCLGAICG G VK FQK  Y   GGGAN +A GY +
Sbjct:   31 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGV------NNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTK 176          
The following BLAST results are available for this feature:
BLAST of FC868503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
PIP13_MAIZE8.188e-5456.29Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP15_MAIZE8.189e-5460.53Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP12_MAIZE4.019e-5357.96Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP11_ORYSJ1.161e-5259.21Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP13_ORYSJ1.161e-5251.93Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP28_ORYSJ7.425e-5259.12Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
PIP16_MAIZE1.261e-5154.38Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP2_PEA6.720e-5058.82Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP11_MAIZE1.346e-4755.92Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP12_ORYSJ6.887e-4762.50Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionC31001B11EF AbioticL1 Citrus clementina cDNA clone C31001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868503 ID=FC868503; Name=FC868503; organism=Citrus clementina; type=EST; length=681bp
CTTCCCCGGGGAGGATCATTAAACTCTGTAGCTCCACAACAGTCGTAGCT
CTTGTTTCTCCCTCTCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAA
ATGGGGAAGGATGTTGAAGTTGCTGAGCAGCAAGGCGGCAGCGGCGAGTT
CTCAGCCAAGGACTACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCG
AGGAGCTGGGCAAGTGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATC
GCTACGCTTTTGTTTCTTTATGTTACCGTCTTGACTGTGATTGGATACAA
GAGCCAGACTGATCCCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCA
TTCTTGGCATCGCTTGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTAC
TGCACAGCCGGTATTTCTGGTGGACATATCAACCCGGCTGTGACATTCGG
ACTGTTCTTGGGGCGCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGG
TAGCACAGTGCTTGGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTC
CAAAAATCATACTACAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGA
TGGATACAACAGGGCACCGGACTGGGTGCTGAGATCATCGGTACTTTCGT
TCTTGTCTACACTGTTTTCTCTGCCACTGAT
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