FC868503

Overview
NameFC868503
Unique NameFC868503
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13179 contig Ccv1_Contig13179:32..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 2.489e-71
Identity = 121/170 (71.18%), Postives = 127/170 (74.71%), Query Frame = 2
Query:  101 MGKDVEVAEQQGGSGEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYN 610
            M KDVE      G   F  +DY DPPP P  D +EL KWS YRAVIAEF+A            IGYK Q+D       CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSLIRA+LYMVAQCLGAICG GFVKAFQ SYY+RYGGGAN LADGYN
Sbjct:    1 MAKDVE------GPEGFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSYYDRYGGGANSLADGYN 164          

HSP 2 Score: 46.2098 bits (108), Expect = 2.489e-71
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 1
Query:  613 GTGLGAEIIGTFVLVYTVFSATD 681
            GTGL AEIIGTFVLVYTVFSATD
Sbjct:  166 GTGLAAEIIGTFVLVYTVFSATD 188          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.233e-71
Identity = 120/173 (69.36%), Postives = 133/173 (76.88%), Query Frame = 2
Query:  101 MGKDVEVAEQQGGSGEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNR 613
            M KD+E A    G GE+ AKDY DPPPAPLID EEL KWS YRAVIAEF+A            IGYK Q+DP  N     C GVGILGIAWAFGGMIFILVYCTAG+SGGHINPAVTFGLFL RKVSL+RA+LY+VAQ LGAICG G VK FQ ++Y RYGGGANEL+DGY++
Sbjct:    1 MAKDIEAAAAAEG-GEYMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSK 172          

HSP 2 Score: 46.595 bits (109), Expect = 4.233e-71
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 1
Query:  610 QGTGLGAEIIGTFVLVYTVFSATD 681
            +GTGL AEIIGTFVLVYTVFSATD
Sbjct:  172 KGTGLAAEIIGTFVLVYTVFSATD 195          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 7.857e-70
Identity = 120/170 (70.59%), Postives = 125/170 (73.53%), Query Frame = 2
Query:  101 MGKDVEVAEQQGGSGEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYN 610
            M KDVE      G   F  +DY DPPP P  D EEL KWS YRAVIAEF+A            IGYK Q+D       CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSLIRA+LYMVAQCLGAICG GFVKAFQ S+Y  YGGGAN LADGYN
Sbjct:    1 MAKDVE------GPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYN 164          

HSP 2 Score: 46.2098 bits (108), Expect = 7.857e-70
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 1
Query:  613 GTGLGAEIIGTFVLVYTVFSATD 681
            GTGL AEIIGTFVLVYTVFSATD
Sbjct:  166 GTGLAAEIIGTFVLVYTVFSATD 188          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.273e-69
Identity = 115/173 (66.47%), Postives = 134/173 (77.46%), Query Frame = 2
Query:  101 MGKDVEVAEQQGGSGEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNR 613
            MGK+ +V  + GG      +DY DPPPAPL+D +ELG+WS YRAVIAEF+A            IGYK QTD + + D   CGGVG+LGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL+RA+LY+VAQCLGA+CG   VK FQ S+Y+RYGGGANELA GY++
Sbjct:    1 MGKEADV--EAGG-----VRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSK 166          

HSP 2 Score: 46.595 bits (109), Expect = 2.273e-69
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 1
Query:  610 QGTGLGAEIIGTFVLVYTVFSATD 681
            +GTGL AEIIGTFVLVYTVFSATD
Sbjct:  166 KGTGLAAEIIGTFVLVYTVFSATD 189          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 6.572e-69
Identity = 116/172 (67.44%), Postives = 131/172 (76.16%), Query Frame = 2
Query:  101 MGKDVEVAEQQGGSGEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYN 610
            MGK+V+V+  + G     A+DY DPPPAPL+D +ELGKWS YRA+IAEF+A            IGYK QTD  +N     CGGVG+LGIAWAFGGMIFILVYCTAG+SGGHINPAVT GLFL RKVSL+RALLYM AQCLGAICG   VK FQ S Y+RYGGGANELA GY+
Sbjct:    1 MGKEVDVSTLEAGG----ARDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYS 168          

HSP 2 Score: 46.2098 bits (108), Expect = 6.572e-69
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 1
Query:  613 GTGLGAEIIGTFVLVYTVFSATD 681
            GTGL AEIIGTFVLVYTVFSATD
Sbjct:  170 GTGLAAEIIGTFVLVYTVFSATD 192          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.479e-68
Identity = 116/173 (67.05%), Postives = 129/173 (74.57%), Query Frame = 2
Query:  101 MGKDVEVAEQQGGSGEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNR 613
            M KD+E A    G      KDY DPPPAPL+D EEL KWS YRAVIAEF+A            IGYK QTD   +     CGGVG+LGIAWAFGGMIFILVYCTAG+SGGHINPAVTFGLFL RKVSL+RALLY+VAQCLGAICG G VK FQ ++Y RYGGGANEL+ GY++
Sbjct:    1 MAKDIEAAAAHEG------KDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSK 167          

HSP 2 Score: 46.595 bits (109), Expect = 2.479e-68
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 1
Query:  610 QGTGLGAEIIGTFVLVYTVFSATD 681
            +GTGL AEIIGTFVLVYTVFSATD
Sbjct:  167 KGTGLAAEIIGTFVLVYTVFSATD 190          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.329e-66
Identity = 114/172 (66.28%), Postives = 128/172 (74.42%), Query Frame = 2
Query:  101 MGKDVEVAEQQGGSGEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYN 610
            MGK+V+V+  + G      +DY DPPPAPLID +ELGKWS YRAVIAEF+A            IGYK QTD + +     C GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL+RALLYM AQ LGAICG   VK FQ  +Y RYGGGANE++ GY+
Sbjct:    1 MGKEVDVSTLEAGG--VRDRDYADPPPAPLIDIDELGKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYS 170          

HSP 2 Score: 46.2098 bits (108), Expect = 1.329e-66
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 1
Query:  613 GTGLGAEIIGTFVLVYTVFSATD 681
            GTGL AEIIGTFVLVYTVFSATD
Sbjct:  172 GTGLAAEIIGTFVLVYTVFSATD 194          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 3.214e-65
Identity = 113/170 (66.47%), Postives = 124/170 (72.94%), Query Frame = 2
Query:  101 MGKDVEVAEQQGGSGEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYN 610
            M KD E+ E++  SG    KDY DPPP    +  EL KWSFYRAVIAEFIA            IG+KSQTD N     C  VG+LGI+WAFGGMIFILVYCTAGISGGHINPAVTFGLFL  KVSL+RA+ YMVAQCLGA CG G VK FQ +YYNRYGGGAN L+DGYN
Sbjct:    1 MTKD-ELTEEESLSG----KDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYN 165          

HSP 2 Score: 45.4394 bits (106), Expect = 3.214e-65
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 1
Query:  613 GTGLGAEIIGTFVLVYTVFSATD 681
            G G+GAEIIGTFVLVYTVFSATD
Sbjct:  167 GVGVGAEIIGTFVLVYTVFSATD 189          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 3.504e-64
Identity = 107/152 (70.39%), Postives = 118/152 (77.63%), Query Frame = 2
Query:  158 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNR 613
            KDY DPPPAPL+D  EL  WSFYRA+IAEFIA            IG+K QT P      C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL+RAL YM+AQCLGAICG GFVKAF K+ YN  GGGAN +ADGY++
Sbjct:   15 KDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGP------CDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSK 160          

HSP 2 Score: 46.595 bits (109), Expect = 3.504e-64
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 1
Query:  610 QGTGLGAEIIGTFVLVYTVFSATD 681
            +GT LGAEIIGTFVLVYTVFSATD
Sbjct:  160 KGTALGAEIIGTFVLVYTVFSATD 183          
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.492e-63
Identity = 106/151 (70.20%), Postives = 116/151 (76.82%), Query Frame = 2
Query:  158 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYN 610
            KDY DPPPAPL+D  EL  WSFYRA+IAEFIA            IG+K+QT P      CGGVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL RA+ YMVAQCLGAICG G VKAF  + Y R GGGAN +ADGY+
Sbjct:   13 KDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGP------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYS 157          

HSP 2 Score: 46.2098 bits (108), Expect = 6.492e-63
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 1
Query:  613 GTGLGAEIIGTFVLVYTVFSATD 681
            GT LGAEIIGTFVLVYTVFSATD
Sbjct:  159 GTALGAEIIGTFVLVYTVFSATD 181          
The following BLAST results are available for this feature:
BLAST of FC868503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
PIP22_ARATH2.489e-7171.18Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP23_ORYSJ4.233e-7169.36Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP23_ARATH7.857e-7070.59Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP25_ORYSJ2.273e-6966.47Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP24_ORYSJ6.572e-6967.44Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP25_MAIZE2.479e-6867.05Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP26_MAIZE1.329e-6666.28Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP26_ARATH3.214e-6566.47Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP27_ARATH3.504e-6470.39Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP28_ARATH6.492e-6370.20Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC31001B11EF AbioticL1 Citrus clementina cDNA clone C31001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868503 ID=FC868503; Name=FC868503; organism=Citrus clementina; type=EST; length=681bp
CTTCCCCGGGGAGGATCATTAAACTCTGTAGCTCCACAACAGTCGTAGCT
CTTGTTTCTCCCTCTCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAA
ATGGGGAAGGATGTTGAAGTTGCTGAGCAGCAAGGCGGCAGCGGCGAGTT
CTCAGCCAAGGACTACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCG
AGGAGCTGGGCAAGTGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATC
GCTACGCTTTTGTTTCTTTATGTTACCGTCTTGACTGTGATTGGATACAA
GAGCCAGACTGATCCCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCA
TTCTTGGCATCGCTTGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTAC
TGCACAGCCGGTATTTCTGGTGGACATATCAACCCGGCTGTGACATTCGG
ACTGTTCTTGGGGCGCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGG
TAGCACAGTGCTTGGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTC
CAAAAATCATACTACAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGA
TGGATACAACAGGGCACCGGACTGGGTGCTGAGATCATCGGTACTTTCGT
TCTTGTCTACACTGTTTTCTCTGCCACTGAT
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