FC868503
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 43/109 (39.45%), Postives = 57/109 (52.29%), Query Frame = 2 Query: 203 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICG 529 EL SF+RA+ AEF A +G + P G + +L +A AFG + LV ISG H+NPAVTF +G ++SL+RA YM AQ LGA+ G Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGSSLRWAP-------GPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAG 100
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 40/118 (33.90%), Postives = 62/118 (52.54%), Query Frame = 2 Query: 188 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFV 541 ++ F+ + +F++AV AEF+A I + P V ++ I+ FG I +V C ISGGHINPAVT + R++S+ +++ Y+ AQCLGAI G G + Sbjct: 23 MVAFKGVWTQTFWKAVTAEFLAMLIFVLLSLGSTINWGGAEKPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGIL 133
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 43/109 (39.45%), Postives = 57/109 (52.29%), Query Frame = 2 Query: 203 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICG 529 EL SF+RA+ AEF A +G + P G + +L +A AFG + LV ISG H+NPAVTF +G ++SL+RA YM AQ LGA+ G Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAG 100
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 5.832e-11 Identity = 38/102 (37.25%), Postives = 51/102 (50.00%), Query Frame = 2 Query: 227 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC 532 +A +AEFIA I + T N G++ IA A +F+ V A SGGH+NPAVTFGL +G ++++ L Y VAQ LGA C Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAFGQLT----NGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVAC 116 HSP 2 Score: 23.483 bits (49), Expect = 5.832e-11 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 619 GLGAEIIGTFVLVYTVFS 672 G+ EI+ TF LVYTV++ Sbjct: 142 GVVFEIVITFALVYTVYA 159
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 62.003 bits (149), Expect = 5.832e-11 Identity = 37/107 (34.58%), Postives = 54/107 (50.47%), Query Frame = 2 Query: 227 RAVIAEFIAXXXXXXXXXXXXIGYKSQT-DPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVK 544 +A +AEFIA I Y T D L+ G++ +A A +F+ V A ISGGH+NPAVT GL +G ++++ Y +AQ LG+ C +K Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDP-----AGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK 120 HSP 2 Score: 24.2534 bits (51), Expect = 5.832e-11 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 619 GLGAEIIGTFVLVYTVFS 672 G+ EII TF LVYTV++ Sbjct: 142 GVVMEIIITFALVYTVYA 159
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 5.832e-11 Identity = 37/107 (34.58%), Postives = 54/107 (50.47%), Query Frame = 2 Query: 227 RAVIAEFIAXXXXXXXXXXXXIGYKSQT-DPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVK 544 +A +AEFIA I Y T D L+ G++ +A A +F+ V A ISGGH+NPAVT GL +G ++++ Y +AQ LG+ C +K Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDP-----AGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK 120 HSP 2 Score: 24.2534 bits (51), Expect = 5.832e-11 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 619 GLGAEIIGTFVLVYTVFS 672 G+ EII TF LVYTV++ Sbjct: 142 GVVMEIIITFALVYTVYA 159
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 44/111 (39.64%), Postives = 58/111 (52.25%), Query Frame = 2 Query: 203 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCG 535 EL SF+RA++AEF+ +G + P G G+LG A AFG LV +SGGHINPA+T L ++SL RAL Y++AQ LGA+ G G Sbjct: 3 ELRSSSFWRAILAEFLGSLLYTLLG----LGASLRWAP-------GPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAG 102
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 42/109 (38.53%), Postives = 57/109 (52.29%), Query Frame = 2 Query: 203 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICG 529 EL SF+RA+ AEF A +G + P G + +L +A AFG + LV ISG H+NPAVTF +G ++SL+RA Y+ AQ LGA+ G Sbjct: 1 ELRSASFWRAIFAEFFATLFYVFFG----LGSSLRWAP-------GPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAG 98
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 39/109 (35.78%), Postives = 55/109 (50.46%), Query Frame = 2 Query: 203 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICG 529 E +SF+RAV AEF + + + G +L IA AFG ++ +V +SG HINPAVTF +G ++SL RA+ Y+ AQ LGA+ G Sbjct: 3 EFRSFSFWRAVFAEFFGTMFYVFFGLGASLKWAA-----------GPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAG 100
BLAST of FC868503 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 42/109 (38.53%), Postives = 57/109 (52.29%), Query Frame = 2 Query: 203 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICG 529 EL SF+RA+ AEF A +G + P G + +L +A AFG + LV ISG H+NPAVTF +G ++SL+RA Y+ AQ LGA+ G Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAG 100 The following BLAST results are available for this feature:
BLAST of FC868503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868503 ID=FC868503; Name=FC868503; organism=Citrus clementina; type=EST; length=681bpback to top |