FC868507

Overview
NameFC868507
Unique NameFC868507
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA2_METAC (Pyrophosphate-energized proton pump 2 OS=Methanosarcina acetivorans GN=hppA2 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.419e-51
Identity = 105/214 (49.07%), Postives = 146/214 (68.22%), Query Frame = 2
Query:    2 LVSLALFAAFVSRAGI--TTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGL 637
            L +LALFA + S+  +   ++++  P V  GL++ A+LP+ FSA+TM +VG AA ++V EVRRQF  IPG+MEGT KP+Y  CV I T A++ EM  PG L +L PL+VG+  G + L+G+L G +V G  +A+   N GGAWDNAKK IE G        G +GSE HKAAV+GDT+GDP KDT+GP+LN LIK++ + +++F+     H GL
Sbjct:  464 LGALALFADYRSKVNLGGQSLNLDDPVVLAGLLLGALLPFVFSAVTMSAVGKAAFEVVNEVRRQFREIPGIMEGTAKPEYGRCVDIVTKAALHEMAMPGFLAVLVPLLVGLILGPKALAGLLIGLIVVGFMLALMMDNGGGAWDNAKKLIEDG------NHGGRGSEAHKAAVVGDTVGDPFKDTAGPALNALIKVVNMVAILFSSLI-IHSGL 670          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA2_METMA (Pyrophosphate-energized proton pump 2 OS=Methanosarcina mazei GN=hppA2 PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.178e-50
Identity = 101/214 (47.20%), Postives = 144/214 (67.29%), Query Frame = 2
Query:    2 LVSLALFAAFVSRAGITT--VDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGL 637
            L +LALFA + ++  + +  + + +P V  G+++ A+LP+ FSA+ M +VG AA ++V EVRRQF  IPG+MEGT KP+Y  CV I T A++ +M  PG L ++ PL+ G F G E L+G+L G +V G  +A+   N GGAWDNAKK IE G        G KGSE H+AAV+GDT+GDP KDT+GP+LN LIK++ + +++F+P     G L
Sbjct:  464 LGALALFADYRNKVSLESQSISLDSPVVLSGILLGAVLPFLFSAVMMSAVGKAAFEVVNEVRRQFREIPGIMEGTAKPEYGRCVDIVTKAALHDMAMPGFLAVIIPLLTGFFLGPEALAGLLTGLIVVGFMLALMMDNGGGAWDNAKKLIEDG------YYGGKGSEAHRAAVVGDTVGDPFKDTAGPALNSLIKVVNMVAILFSPLIIGGGFL 671          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA_THETN (Pyrophosphate-energized proton pump OS=Thermoanaerobacter tengcongensis GN=hppA PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.074e-49
Identity = 96/188 (51.06%), Postives = 132/188 (70.21%), Query Frame = 2
Query:   56 VDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFF 619
            VD+  P+VFIG  + AM+ Y FS+  +++VG AA  ++ EVRRQF  IPG+MEGT KPDYA  V I T  ++KEM+ PG +V++TP++VG+  G E  +  L    +SGV +A+  +N GGAWDNAKK+IE G        G KGS+ HKA+V+GDT+GDP KDT+GPSL++LIKL++  +LVF   F
Sbjct:  529 VDIGKPEVFIGAFIGAMIVYLFSSTAIRAVGKAAQYVILEVRRQFREIPGIMEGTAKPDYARAVDIVTKGALKEMVIPGLIVVVTPILVGVILGKEAAAAFLMIGTISGVILALYLNNGGGAWDNAKKFIELG------NYGGKGSDAHKASVVGDTVGDPFKDTAGPSLHVLIKLISTITLVFVALF 710          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA_THEMA (Pyrophosphate-energized proton pump OS=Thermotoga maritima GN=hppA PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.537e-49
Identity = 95/191 (49.74%), Postives = 134/191 (70.16%), Query Frame = 2
Query:   47 ITTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFF 619
            +  +++L  +V  G ++ A + Y+FS   + +V  AA+KMV+E+RRQ   IPGL+EG  KPDY  C++I++D ++K+M  P  + +LTPL+ G   G E + GVL G+++SG  +AI  +N+GGAWDNAKKY+EAG  E       KGSEPHKA VIGDT+GDPLKDT GPSL+ILIK+M+V S++    F
Sbjct:  534 VLLLNMLDARVIAGALLGAAITYYFSGYLISAVTKAAMKMVDEIRRQAREIPGLLEGKAKPDYNRCIEITSDNALKQMGYPAFIAILTPLVTGFLLGAEFVGGVLIGTVLSGAMLAILTANSGGAWDNAKKYLEAGNLEGY----GKGSEPHKALVIGDTVGDPLKDTVGPSLDILIKIMSVVSVIAVSIF 720          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA_NITEU (Pyrophosphate-energized proton pump OS=Nitrosomonas europaea GN=hppA PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.033e-49
Identity = 103/208 (49.52%), Postives = 140/208 (67.31%), Query Frame = 2
Query:    2 LVSLALFAAFVSRAG----ITTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 613
            L +L LFA +         + T D+    V IGL +  M+P+ F AM+M++VG AA  +V EVRRQF  IPG+M+G+ KPDY+  V + T A+I+EMI P  L +L P++VG+F G + L GVL GS+V+G+ IAIS +  GGAWDNAKKYIE G        G KGS+ HKAAV GDT+GDP KDT+GP++N LIK++ + +L+  P
Sbjct:  482 LAALVLFADYTHGLEHANKLMTFDLSNHLVIIGLFIGGMVPFLFGAMSMEAVGRAAGSVVLEVRRQFKEIPGIMDGSRKPDYSRAVDMLTKAAIREMIVPSLLPVLIPVLVGVFLGPQALGGVLMGSIVTGLFIAISMTAGGGAWDNAKKYIEDG------NYGGKGSDAHKAAVTGDTVGDPYKDTAGPAINPLIKIINIVALLIIP 683          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA2_RHOPA (Pyrophosphate-energized proton pump OS=Rhodopseudomonas palustris GN=hppA PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.911e-48
Identity = 98/208 (47.12%), Postives = 138/208 (66.35%), Query Frame = 2
Query:    2 LVSLALFA----AFVSRAGITTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 613
            L +L LFA    A  +R    + D+   +V +GL +  ++PY F++M M++VG AA  +V EVRRQF  I G+MEGT KP+Y T V + T A+IKEMI P  L ++ P++VG+  G   L G+L G++V+G+ + IS    GGAWDNAKK IE G ++    L  KGSE HKAAV GDT+GDP KDT+GP++N LIK++ + +L+  P
Sbjct:  474 LAALVLFADYTHALEARGMSLSFDLSDHRVIVGLFIGGLIPYLFASMAMEAVGRAAGSVVVEVRRQFRDIKGIMEGTAKPEYGTAVDMLTTAAIKEMIVPSLLPVVAPILVGMLLGPAALGGLLMGTIVTGIFVGISMCTGGGAWDNAKKLIEEGFTDANGVLHKKGSEAHKAAVTGDTVGDPYKDTAGPAVNPLIKIINIVALLIVP 681          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA_BACTN (Pyrophosphate-energized proton pump OS=Bacteroides thetaiotaomicron GN=hppA PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.941e-47
Identity = 95/196 (48.47%), Postives = 127/196 (64.80%), Query Frame = 2
Query:   23 AAFVSRAGITTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFA 610
            A FV       V ++ PKV  G+ + +M+ + F  +TM +VG AA  MV+EVRRQF  I G++ G  +PDY  CV IST  + +EM+ P  + +L P+  G+ FGV  + G+L G L +G  +AI  +N GGAWDNAKKY+E G        G KG E HKA V+GDT+GDP KDTSGPSLNILIKLM++ ++V A
Sbjct:  536 ATFVDFMNYYDVTLMNPKVLSGMFLGSMMAFLFCGLTMNAVGRAAGHMVDEVRRQFREIKGILTGEAEPDYERCVAISTKGAQREMVIPSLIAILAPIATGLIFGVTGVLGLLIGGLSTGFVLAIFMANAGGAWDNAKKYVEEG------NFGGKGGEVHKATVVGDTVGDPFKDTSGPSLNILIKLMSMVAIVMA 725          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: AVP2_ARATH (Pyrophosphate-energized membrane proton pump 2 OS=Arabidopsis thaliana GN=AVPL1 PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 5.647e-47
Identity = 101/224 (45.09%), Postives = 141/224 (62.95%), Query Frame = 2
Query:    2 LVSLALFAAFV------SRAGITTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFF------------GVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFF 619
            L S  LF+A++      +      VD+  P+VF+G ++ AML + FSA    +VG  A ++V EVRRQF   PG+ME   KPDY+ CV I   A+++EMI PGAL + +P++VG+ F            G + ++ +L  + V G+ +A+  +  GGAWDNAKKYIE GA      LG KGSE HKAAV GDT+GDP KDT+GPS+++LIK++A  +LV AP F
Sbjct:  584 LASFLLFSAYMDEVSAFANVSFKEVDIAIPEVFVGGLLGAMLIFLFSAWACAAVGRTAQEVVNEVRRQFIERPGIMEYKEKPDYSRCVAIVASAALREMIKPGALAIASPIVVGLVFRILGYYTGQPLLGAKVVASMLMFATVCGILMALFLNTAGGAWDNAKKYIETGA------LGGKGSEAHKAAVTGDTVGDPFKDTAGPSIHVLIKMLATITLVMAPVF 801          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA_XANCP (Pyrophosphate-energized proton pump OS=Xanthomonas campestris pv. campestris GN=hppA PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.375e-47
Identity = 98/210 (46.67%), Postives = 135/210 (64.29%), Query Frame = 2
Query:    2 LVSLALFAAFVSRAG------ITTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 613
            L +L LFA +           +   D+    V IGL++  ++PY F AM M++VG AA  +VEEVRRQF  IPG+M GT KP Y   V + T ++I+EMI P  L ++ P+IVG+  G   L G+L G++V+G+ +AIS +  GGAWDNAKKYIE G        G KGSE HKAA+ GDT+GDP KDT+GP++N LIK++ + +L+  P
Sbjct:  470 LAALVLFADYTHNLQAANPNEVFAFDLSDHTVIIGLLIGGLIPYLFGAMAMEAVGRAAGAVVEEVRRQFRDIPGIMTGTAKPQYDRAVDMLTRSAIREMIVPSLLPVVVPVIVGLLLGPRALGGLLIGTIVTGLFVAISMTTGGGAWDNAKKYIEDG------HFGGKGSEAHKAAITGDTVGDPYKDTAGPAINPLIKIINIVALLLVP 673          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA_XANAC (Pyrophosphate-energized proton pump OS=Xanthomonas axonopodis pv. citri GN=hppA PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.660e-46
Identity = 97/210 (46.19%), Postives = 134/210 (63.81%), Query Frame = 2
Query:    2 LVSLALFAAFVSRAG------ITTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAP 613
            L +L LFA +           +   D+    V IGL++  ++PY F AM M++VG AA  +VEEVRRQF  +PG+M GT KP Y   V + T ++I EMI P  L ++ P+IVG+  G   L G+L G++V+G+ +AIS +  GGAWDNAKKYIE G        G KGSE HKAA+ GDT+GDP KDT+GP++N LIK++ + +L+  P
Sbjct:  470 LAALVLFADYTHNLQAANPDQVYAFDLSDHTVIIGLLIGGLIPYLFGAMAMEAVGRAAGAVVEEVRRQFRELPGIMAGTAKPQYDRAVDMLTRSAIGEMIVPSLLPVVVPIIVGLLLGPRALGGLLIGTIVTGLFLAISMTTGGGAWDNAKKYIEDG------HFGGKGSEAHKAAITGDTVGDPYKDTAGPAINPLIKIINIVALLLVP 673          
The following BLAST results are available for this feature:
BLAST of FC868507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
HPPA2_METAC8.419e-5149.07Pyrophosphate-energized proton pump 2 OS=Methanosa... [more]
HPPA2_METMA4.178e-5047.20Pyrophosphate-energized proton pump 2 OS=Methanosa... [more]
HPPA_THETN2.074e-4951.06Pyrophosphate-energized proton pump OS=Thermoanaer... [more]
HPPA_THEMA3.537e-4949.74Pyrophosphate-energized proton pump OS=Thermotoga ... [more]
HPPA_NITEU6.033e-4949.52Pyrophosphate-energized proton pump OS=Nitrosomona... [more]
HPPA2_RHOPA3.911e-4847.12Pyrophosphate-energized proton pump OS=Rhodopseudo... [more]
HPPA_BACTN1.941e-4748.47Pyrophosphate-energized proton pump OS=Bacteroides... [more]
AVP2_ARATH5.647e-4745.09Pyrophosphate-energized membrane proton pump 2 OS=... [more]
HPPA_XANCP7.375e-4746.67Pyrophosphate-energized proton pump OS=Xanthomonas... [more]
HPPA_XANAC3.660e-4646.19Pyrophosphate-energized proton pump OS=Xanthomonas... [more]

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Properties
Property NameValue
Genbank descriptionC31001C04EF AbioticL1 Citrus clementina cDNA clone C31001C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868507 ID=FC868507; Name=FC868507; organism=Citrus clementina; type=EST; length=704bp
GTTGGTGTCTTTGGCTCTATTTGCTGCTTTTGTGAGCCGTGCTGGAATTA
CAACTGTTGATGTTTTGACCCCCAAGGTCTTCATTGGTCTGATTGTTGAG
GCCATGCTTCCTTACTGGTTCTCAGCCATGACAATGAAGAGTGTGGGAAG
TGCAGCTTTGAAGATGGTTGAGGAAGTCCGCAGACAGTTCAACACCATTC
CAGGTCTCATGGAGGGCACTACCAAGCCTGATTACGCTACCTGTGTTAAG
ATCTCAACCGATGCATCCATCAAGGAGATGATTCCTCCTGGTGCTCTTGT
CATGCTCACACCCCTCATTGTTGGAATCTTCTTTGGTGTGGAAACCCTTT
CTGGTGTGCTCGCTGGCTCCCTTGTTTCGGGTGTTCAGATAGCAATATCT
GCCTCCAACACTGGCGGTGCATGGGATAATGCCAAGAAATATATTGAGGC
TGGTGCCTCAGAGCATGCAAGGACCCTTGGCCCAAAGGGTTCTGAGCCAC
ACAAGGCAGCTGTGATTGGTGATACCATTGGAGATCCACTGAAGGATACG
TCAGGCCCATCTCTAAACATCCTCATCAAACTCATGGCCGTTGAATCACT
GGTGTTTGCTCCTTTCTTTGCCACCCACGGTGGNCTGCTTTTCAAGATCT
TCTGAAGAAGAGATAATGTGAAATACATTGCGGAAGAAGGTCATTGACTT
TTGC
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