FC868507

Overview
NameFC868507
Unique NameFC868507
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: AVPX_ARATH (Pyrophosphate-energized membrane proton pump 3 OS=Arabidopsis thaliana GN=AVPL2 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.065e-45
Identity = 99/224 (44.20%), Postives = 139/224 (62.05%), Query Frame = 2
Query:    2 LVSLALFAAFV------SRAGITTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFF------------GVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFF 619
            L S  LF+A++      +      VD+  P+VFIG ++ AML + FSA    +VG  A ++V EVRRQF   PG+M+   KPDY  CV I   ++++EMI PGAL +++P+ VG  F            G + ++ +L  + V G+ +A+  +  GGAWDNAKKYIE GA      LG KGS+ HKAAV GDT+GDP KDT+GPS+++LIK++A  +LV AP F
Sbjct:  584 LASFLLFSAYMDEVSAFANVSFKEVDIAIPEVFIGGLLGAMLIFLFSAWACAAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASSALREMIKPGALAIISPIAVGFVFRILGYYTGQPLLGAKVVAAMLMFATVCGILMALFLNTAGGAWDNAKKYIETGA------LGGKGSDSHKAAVTGDTVGDPFKDTAGPSIHVLIKMLATITLVMAPIF 801          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA_RHORT (Pyrophosphate-energized proton pump OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=hppA PE=1 SV=3)

HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43
Identity = 96/208 (46.15%), Postives = 132/208 (63.46%), Query Frame = 2
Query:   26 AFVSRAGI-TTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIV-GIFFGV-------ETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFA 622
            A+ + AG+     + +P V +GL +  +LPY F +M M +VG AA  +VEEVRRQF  IPG+MEGT KP+Y  CV + T A+IKEMI P  L +L P+++  +  G+         L  +L G +V+G+ +AIS +  GGAWDNAKKYIE G        G KGSE HKAAV GDT+GDP KDT+GP++N +IK+  + +L+     A
Sbjct:  500 AYPAFAGVDVNFSLSSPYVVVGLFIGGLLPYLFGSMGMTAVGRAAGSVVEEVRRQFREIPGIMEGTAKPEYGRCVDMLTKAAIKEMIIPSLLPVLAPIVLYFVILGIADKSAAFSALGAMLLGVIVTGLFVAISMTAGGGAWDNAKKYIEDG------HYGGKGSEAHKAAVTGDTVGDPYKDTAGPAVNPMIKITNIVALLLLAVLA 701          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA_MYXXA (Pyrophosphate-energized proton pump (Fragment) OS=Myxococcus xanthus GN=hppA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.102e-42
Identity = 99/217 (45.62%), Postives = 133/217 (61.29%), Query Frame = 2
Query:    2 LVSLALFAAFVSRAGITTV---------DVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAG-ASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFA 622
            L  +ALF+AF      T +          +  P V +GL++ ++LP+   A TM +VG AA  +VEE+ RQF  IPGLME    PD    V I+T ++++EM+ PG + +  P +VG   G   L+G+LAGSLV G  +A+  +N GGAWDNAKK+IE G    HA     KGS  HKAAV+GD +GDP KDTSGP + ILIK+M+V SL+ A   A
Sbjct:   62 LTVIALFSAFNLEVNHTRIAAGLPEMSLQLTNPNVIVGLLLGSILPFLVGASTMLAVGRAAGAIVEEIGRQFREIPGLMELKADPDPKKIVDIATKSALQEMVFPGIIAVAAPPLVGYLLGPGALAGLLAGSLVVGATMALYMANAGGAWDNAKKFIEKGKLPGHA-----KGSAVHKAAVVGDMVGDPFKDTSGPGVAILIKVMSVVSLLVASLIA 273          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA_CAUCR (Pyrophosphate-energized proton pump OS=Caulobacter crescentus GN=hppA PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.591e-41
Identity = 92/212 (43.40%), Postives = 131/212 (61.79%), Query Frame = 2
Query:   26 AFVSRAGITTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSG----------VLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHG 631
            +F    G  T D+  P V +GL+   +LP+ F  ++M +VG AA  +V EVRRQF   PG+M G  KP+Y   V I T A+I+EMI P  L +++P  V +FF ++ ++G          +L G +V+G+ +AIS ++ GGAWDNAKK IE G ++    L  KG E HKAAV GDT+GDP KDTSGP++N +IK+  + +L+     A HG
Sbjct:  503 SFFHGMGAVTFDLSNPYVVVGLLFGGLLPFLFGGLSMTAVGRAAESVVAEVRRQFRDNPGIMTGEVKPEYGKAVDILTKAAIREMIVPSLLPVVSP--VALFFVIQAIAGKVDAFAALGAMLMGVIVTGLFVAISMTSGGGAWDNAKKVIEEGFTDKNGVLHKKGGETHKAAVTGDTVGDPYKDTSGPAVNPMIKITNIVALLLLAVLA-HG 711          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA_PYRAE (Pyrophosphate-energized proton pump OS=Pyrobaculum aerophilum GN=hppA PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.047e-41
Identity = 85/187 (45.45%), Postives = 124/187 (66.31%), Query Frame = 2
Query:   47 ITTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVF 607
            ++ + ++   V IG  +   L Y+FS+ T+++VG  A+++VEE+RRQF   PG++E   +PDYA  V I+T  ++ E + PG   ++ PLI G+  G   L+G++ G++V+GV  A+  +N GGAWDNAKKYIE          G K +E HKAAVIGDT+GDP+KDT GPSLN LIK++   S+VF
Sbjct:  522 LSGLQLINANVLIGAFLGVALVYFFSSRTLEAVGRTAMEIVEEIRRQFREKPGILEWKEQPDYARVVDIATRRALGEFLIPGLAAIVLPLITGLLLGWNALAGLIMGAIVAGVPRALLMANAGGAWDNAKKYIE--------IQGLKKTEMHKAAVIGDTVGDPMKDTVGPSLNPLIKVLNTLSVVF 700          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA1_RHOPA (Pyrophosphate-energized proton pump OS=Rhodopseudomonas palustris GN=hppA PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.347e-40
Identity = 92/199 (46.23%), Postives = 125/199 (62.81%), Query Frame = 2
Query:   71 PKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSG---------------VLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFA 622
            P V +GL+   +LPY F AM M +VG AA  +VEEVRRQF   PG+M+GT KPDY   V + T A+IKEMI P  L +L+P+ V  +F +  ++G               +L G +V+G+ +AIS ++ GGAWDNAKKYIE G        G KGS+ HKAAV GDT+GDP KDT+GP++N +IK+  + +L+     A
Sbjct:  515 PYVVVGLLFGGLLPYLFGAMGMTAVGRAAGAIVEEVRRQFREKPGIMKGTDKPDYGKAVDLLTKAAIKEMIIPSLLPVLSPIFV--YFAIYAIAGGGAAGKSAAFSAVGAMLLGVIVTGLFVAISMTSGGGAWDNAKKYIEDGHH------GGKGSDAHKAAVTGDTVGDPYKDTAGPAVNPMIKITNIVALLLLAILA 705          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA_BRAJA (Pyrophosphate-energized proton pump OS=Bradyrhizobium japonicum GN=hppA PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.759e-40
Identity = 91/199 (45.73%), Postives = 126/199 (63.32%), Query Frame = 2
Query:   71 PKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSG---------------VLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFA 622
            P V +GL+   +LPY F AM M +VG AA  +VEEVRRQF   PG+M+GT KPDY   V + T A+IKEMI P  L +L+P++V  +F +  ++G               +L G +V+G+ +AIS ++ GGAWDNAKKYIE G        G KGS+ HK+AV GDT+GDP KDT+GP++N +IK+  + +L+     A
Sbjct:  515 PYVVVGLLFGGLLPYLFGAMGMTAVGRAASAIVEEVRRQFREKPGIMQGTDKPDYGKAVDLLTKAAIKEMIIPSLLPVLSPIVV--YFLIYAIAGGGATGKSAAFSAVGAMLLGVIVTGLFVAISMTSGGGAWDNAKKYIEDG------HYGGKGSDAHKSAVTGDTVGDPYKDTAGPAVNPMIKITNIVALLLLAILA 705          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA_RHIME (Pyrophosphate-energized proton pump OS=Rhizobium meliloti GN=hppA PE=3 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 3.920e-40
Identity = 95/221 (42.99%), Postives = 130/221 (58.82%), Query Frame = 2
Query:   11 LALFAA------FVSRAGITTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGV-----------LAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFA 622
            LA FAA      + +  G  + D+  P V  GLI   ++PY F  + M +VG A   +VEEVRRQF   PG+MEG  +PDY   V + T A+I+EMI P  L +L P++V  +FGV  +SG            L G +V+G+ +AIS ++ GGAWDNAKK  E G  +   T   KGSE HKA+V GDT+GDP KDT+GP++N  IK+  + +L+     A
Sbjct:  493 LAYFAANGDKHPYFADVGTISFDLSNPYVVAGLIFGGLIPYLFGGIAMTAVGRAGSAVVEEVRRQFKEKPGIMEGKDRPDYGRAVDMLTKAAIREMIIPSLLPVLAPIVV--YFGVLLISGSKASAFAALGASLLGVIVNGLFVAISMTSGGGAWDNAKKSFEDGFVDRNGTRHMKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAVLA 711          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA_RHILO (Pyrophosphate-energized proton pump OS=Rhizobium loti GN=hppA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.732e-40
Identity = 93/207 (44.93%), Postives = 128/207 (61.84%), Query Frame = 2
Query:   44 GITTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSG-----------VLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHG 631
            G  + D+  P V  GLI   ++PY F  + M +VG AA  +VEEVR+QF   PG+M GT+KP+YA  V + T A+I+EMI P  L +L PL+V  +FGV  +SG            L G +V+G+ +AIS ++ GGAWDNAKK  E G ++       KGSE HKA+V GDT+GDP KDT+GP++N  IK+  + +L+     A HG
Sbjct:  510 GEISFDLSNPYVVAGLIFGGLIPYLFGGIAMTAVGRAAGAIVEEVRKQFREDPGIMAGTSKPNYARAVDLLTKAAIREMIIPSLLPVLAPLVV--YFGVLLISGSKASAFAALGASLLGVIVNGLFVAISMTSGGGAWDNAKKSFEDGFTDKDGVKHLKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAVLA-HG 713          
BLAST of FC868507 vs. ExPASy Swiss-Prot
Match: HPPA_BRUSU (Pyrophosphate-energized proton pump OS=Brucella suis GN=hppA PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.334e-39
Identity = 93/221 (42.08%), Postives = 130/221 (58.82%), Query Frame = 2
Query:   11 LALFAA------FVSRAGITTVDVLTPKVFIGLIVEAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGV-----------LAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFA 622
            LA FAA      + +  G  + D+  P V  GLI   ++PY F  M M +VG A   +V+EVRRQF   PG+M G  +PDYA  V + T A+I+EMI P  L +L P++V  +FGV  +SG            L G +++G+ +AIS ++ GGAWDNAKK  E G ++       KGSE HKA+V GDT+GDP KDT+GP++N  IK+  + +L+     A
Sbjct:  497 LAYFAANGQIYPYFADMGPVSFDLSNPYVVAGLIFGGLIPYLFGGMAMTAVGRAGGAVVQEVRRQFREKPGIMTGKERPDYARAVDLLTKAAIREMIIPSLLPVLAPIVV--YFGVLLISGSKAAAFAALGASLLGVIINGLFVAISMTSGGGAWDNAKKSFEDGFTDADGVKHMKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAVLA 715          
The following BLAST results are available for this feature:
BLAST of FC868507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
AVPX_ARATH1.065e-4544.20Pyrophosphate-energized membrane proton pump 3 OS=... [more]
HPPA_RHORT6.461e-4346.15Pyrophosphate-energized proton pump OS=Rhodospiril... [more]
HPPA_MYXXA1.102e-4245.62Pyrophosphate-energized proton pump (Fragment) OS=... [more]
HPPA_CAUCR1.591e-4143.40Pyrophosphate-energized proton pump OS=Caulobacter... [more]
HPPA_PYRAE6.047e-4145.45Pyrophosphate-energized proton pump OS=Pyrobaculum... [more]
HPPA1_RHOPA1.347e-4046.23Pyrophosphate-energized proton pump OS=Rhodopseudo... [more]
HPPA_BRAJA1.759e-4045.73Pyrophosphate-energized proton pump OS=Bradyrhizob... [more]
HPPA_RHIME3.920e-4042.99Pyrophosphate-energized proton pump OS=Rhizobium m... [more]
HPPA_RHILO8.732e-4044.93Pyrophosphate-energized proton pump OS=Rhizobium l... [more]
HPPA_BRUSU4.334e-3942.08Pyrophosphate-energized proton pump OS=Brucella su... [more]

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Properties
Property NameValue
Genbank descriptionC31001C04EF AbioticL1 Citrus clementina cDNA clone C31001C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868507 ID=FC868507; Name=FC868507; organism=Citrus clementina; type=EST; length=704bp
GTTGGTGTCTTTGGCTCTATTTGCTGCTTTTGTGAGCCGTGCTGGAATTA
CAACTGTTGATGTTTTGACCCCCAAGGTCTTCATTGGTCTGATTGTTGAG
GCCATGCTTCCTTACTGGTTCTCAGCCATGACAATGAAGAGTGTGGGAAG
TGCAGCTTTGAAGATGGTTGAGGAAGTCCGCAGACAGTTCAACACCATTC
CAGGTCTCATGGAGGGCACTACCAAGCCTGATTACGCTACCTGTGTTAAG
ATCTCAACCGATGCATCCATCAAGGAGATGATTCCTCCTGGTGCTCTTGT
CATGCTCACACCCCTCATTGTTGGAATCTTCTTTGGTGTGGAAACCCTTT
CTGGTGTGCTCGCTGGCTCCCTTGTTTCGGGTGTTCAGATAGCAATATCT
GCCTCCAACACTGGCGGTGCATGGGATAATGCCAAGAAATATATTGAGGC
TGGTGCCTCAGAGCATGCAAGGACCCTTGGCCCAAAGGGTTCTGAGCCAC
ACAAGGCAGCTGTGATTGGTGATACCATTGGAGATCCACTGAAGGATACG
TCAGGCCCATCTCTAAACATCCTCATCAAACTCATGGCCGTTGAATCACT
GGTGTTTGCTCCTTTCTTTGCCACCCACGGTGGNCTGCTTTTCAAGATCT
TCTGAAGAAGAGATAATGTGAAATACATTGCGGAAGAAGGTCATTGACTT
TTGC
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