FC868529
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868529 vs. ExPASy Swiss-Prot
Match: PP171_ARATH (Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidopsis thaliana GN=At2g26790 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11 Identity = 39/108 (36.11%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 367 DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNHIEEAWNVVYKMVASGIQPDA 690 D + +N +A S+ G V+EA ++ Q+MKD G P Y TLI GY GK ++L L+ M + P+ TYN+LV H EE + +M A G +P+A Sbjct: 387 DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI-GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNA 493
BLAST of FC868529 vs. ExPASy Swiss-Prot
Match: PP141_ARATH (Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana GN=At2g01740 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11 Identity = 39/172 (22.67%), Postives = 79/172 (45.93%), Query Frame = 1 Query: 172 TKLMNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNHIEEAWNVVYKMVASGIQPD 687 T +++ +G A ++ +G R + Y +++ L + K ++ +EK + PD ++F M+NA +SG + A+ ++ K+ + G +P +T+I G G+ E++ + K ND Y +L+ A C + E + K+ +G+ PD Sbjct: 272 TTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI------EKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPD 437 HSP 2 Score: 67.3958 bits (163), Expect = 8.235e-11 Identity = 32/141 (22.70%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 265 LITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNHIEEAWNVVYKMVASGIQPD 687 ++TYT L+ ++ + + S++ +D ++P+S+++ +I+ + G+ D AMK KM + G + + Y +I G GK +E+ ++++ M + ++ P+ + ++ A+ ++ A N+ +K++ G +PD Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM-EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPD 372
BLAST of FC868529 vs. ExPASy Swiss-Prot
Match: PP160_ARATH (Pentatricopeptide repeat-containing protein At2g17525, mitochondrial OS=Arabidopsis thaliana GN=At2g17525 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11 Identity = 43/166 (25.90%), Postives = 81/166 (48.80%), Query Frame = 1 Query: 172 TKLMNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDR--TYNILVRAWCSKNHIEEAWNVVYKM 663 TK+M +L +G+ EA + + +G + ++ TLV + + ++E+ G P+ +N +I + G +D A+ F MK + +T+NTLI+G G+ ++ LK+L++M QD + R YN ++ + +N E+A + KM Sbjct: 287 TKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM-QDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM 451 HSP 2 Score: 68.1662 bits (165), Expect = 4.828e-11 Identity = 42/168 (25.00%), Postives = 76/168 (45.24%), Query Frame = 1 Query: 178 LMNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNHIEEAWNVVYKMVASGIQ 681 L++ L GK A L+ E P +T+ L++A +++ + L+ K G PD + ++ G V EA+++ ++++ G K NTL+KGY +GK + + M + K PN TYN+L+ +C ++ A + M I+ Sbjct: 223 LLHALCKNGKVGRAR----SLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMER-KGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIR 385
BLAST of FC868529 vs. ExPASy Swiss-Prot
Match: PPR82_ARATH (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana GN=At1g55890 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11 Identity = 36/144 (25.00%), Postives = 74/144 (51.39%), Query Frame = 1 Query: 256 RPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNHIEEAWNVVYKMVASGIQPD 687 +P +++Y TL+ AL + ++L+ ++E G+KPD + FN ++ + G + +I+ KM + TYN + G N K +E + L + + +KP+ ++N ++R ++ ++EA ++V G +PD Sbjct: 177 KPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGEL-KASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319
BLAST of FC868529 vs. ExPASy Swiss-Prot
Match: PP262_ARATH (Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana GN=EMB2076 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11 Identity = 46/171 (26.90%), Postives = 89/171 (52.05%), Query Frame = 1 Query: 178 LMNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKP-DSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNHIEEAWNVVYKMVASGIQPD 687 L+N L GK +++ L GH+P T+ L+ AL + R++ +L L + + + + L+N + +C + G ++A+K+ +M+ SG +TS+YN +I K + +L + + M+Q ++ KPN TY LVR+ + +E +++ K ++PD Sbjct: 325 LINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQ-RDCKPNTFTYLSLVRSCIWGSLWDEVEDILKK-----VEPD 489
BLAST of FC868529 vs. ExPASy Swiss-Prot
Match: PP117_ARATH (Pentatricopeptide repeat-containing protein At1g73400, mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11 Identity = 55/199 (27.64%), Postives = 83/199 (41.71%), Query Frame = 1 Query: 121 CCLVCSGNNGCRTVRSRTK----LMNILV----GKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDG---MKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNHIEEAWNVVYKMVASGIQP 684 C LV G R +R R K N+L P +A + +IE GH+P TY + + L + G P + F MI A +++ +E ++ +M +GC P STY +I+G K +E+ K L MS +K P+ TYN +R C +EA + +MV S P Sbjct: 247 CGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMS-NKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAP 444
BLAST of FC868529 vs. ExPASy Swiss-Prot
Match: PP366_ARATH (Putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial OS=Arabidopsis thaliana GN=At5g06400 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11 Identity = 38/148 (25.68%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 247 EGHRPTL--ITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQDKNVKPNDRTYNILVRAWCSKNHIEEAWNVVYKMVASGIQP 684 EG R L TY ++V L ++ + L ++ +++ G KP ++ ++I + +++ ++ QKM+ C+P+ TY +I GY ++GK EE+ + M +++ P+ +TY+ + C E+A ++ +M+ GI P Sbjct: 846 EGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNM-EERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP 992
BLAST of FC868529 vs. ExPASy Swiss-Prot
Match: PP233_ARATH (Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11 Identity = 42/164 (25.61%), Postives = 84/164 (51.22%), Query Frame = 1 Query: 127 LVCSGNN--GCRTVRSRTKLMNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMS-QDKNVKPNDRTYNILVR 609 L CS GC +++ ++N G HEA + +I RP +++Y T++ ALT++ + + L + PD + N +I+A + EA+++F+++ + G P TYN+L+K + + E+ +L++ M + + PND T++ L++ Sbjct: 235 LFCSRRREFGC-DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK 397
BLAST of FC868529 vs. ExPASy Swiss-Prot
Match: PP429_ARATH (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11 Identity = 38/131 (29.01%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 172 TKLMNILVGKGKPHEAHYIFNCLIEEGHRPTLITYTTLVAALTRQKRFKSILSLISKVEKDGMKPDSILFNAMINACSESGNVDEAMKIFQKMKDSGCKPTTSTYNTLIKGYGNVGKPEESLKLLQLMSQD 564 + L+++ G P A+ +FN E L + ++ A + + ++ L +++ GMKP+ I F ++NACS +G VDE F +MK+S +PT Y +L+ G G+ +E+L+++ M D Sbjct: 256 SSLVSLYSKCGVPEGAYQVFN----EVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPID 382 The following BLAST results are available for this feature:
BLAST of FC868529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868529 ID=FC868529; Name=FC868529; organism=Citrus clementina; type=EST; length=691bpback to top |