FC868537

Overview
NameFC868537
Unique NameFC868537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_ARTAT (Anthranilate phosphoribosyltransferase OS=Arthrobacter aurescens (strain TC1) GN=trpD PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.389e-25
Identity = 68/144 (47.22%), Postives = 89/144 (61.81%), Query Frame = 1
Query:  223 LIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGF 651
            LI  LI+  DL     + +++ ++  EA  A I+ FLV LRAKGET  E+ GL  AM+++A  ++  G+ +DIVGTGGD  NTVNIST A+++AA  GAKV K             DVLEALGV +DL  E V R  +EAGI F
Sbjct:   17 LISALINGDDLAVGNTEWAMNTIMAGEATPAQIAGFLVALRAKGETVEELAGLVEAMVQHANPIDISGEKLDIVGTGGDRLNTVNISTMAALVAAGAGAKVVKHGNRAASSASGSADVLEALGVRLDLSIEQVARNAEEAGITF 160          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_SYMTH (Anthranilate phosphoribosyltransferase OS=Symbiobacterium thermophilum GN=trpD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.120e-25
Identity = 65/137 (47.45%), Postives = 85/137 (62.04%), Query Frame = 1
Query:  250 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            DLTEA+A+A++  ++  EA  A ++AFL+ LR KGET  EI G AR M + A ++       VD  GTGGDG++T NIST A+ + A  G  VAK             DVLEALG+ +DL PE V RC+DE GIGF+
Sbjct:   13 DLTEAQAEAAMTLMMTGEATPAQVAAFLMALRIKGETVAEITGAARVMRERAIRIHHSRPLVVDTCGTGGDGSHTFNISTTAAFVVAGAGVAVAKHGNRAATSLTGSADVLEALGIHLDLTPEEVGRCIDEVGIGFL 149          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSF (Anthranilate phosphoribosyltransferase OS=Geobacter sp. (strain FRC-32) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.075e-25
Identity = 65/156 (41.67%), Postives = 89/156 (57.05%), Query Frame = 1
Query:  235 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE---------------GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            ++ R DL+++E    +D +++ EA  A I+AF+  LR KGET  EI G AR M   AT++                 L   +D+VGTGGDG NT NIST  S + AACG KVAK             DV+EALG+ +++ PE V  C++EAGIGF+
Sbjct:    9 VVEREDLSQSEMIQVMDQIMSGEATPAQIAAFITALRMKGETVAEIAGAARVMRDRATRIRVGKNVLDLDRDDINIDLETILDVVGTGGDGTNTFNISTTVSFVVAACGVKVAKHGNRSVSSACGSADVVEALGISLEVTPETVENCINEAGIGFL 164          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_RHOSR (Anthranilate phosphoribosyltransferase OS=Rhodococcus sp. (strain RHA1) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.322e-25
Identity = 72/157 (45.86%), Postives = 96/157 (61.15%), Query Frame = 1
Query:  184 SDNTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGF 651
            +D  RP    +  ++  L    DL+  EA+ ++D ++++ A  A I+AF V L+ KGET  E+ GLA +M+ +A KV    D VDIVGTGGD +NTVNIST AS++ AA G +V K             DVLEALGV I+L P+ V RCV E GIGF
Sbjct:   10 NDGVRPART-WPSVLGTLTDGRDLSVDEAKWAMDEIMSDNATSAQIAAFGVALKMKGETPEELRGLADSMLGHARKVPVDDDVVDIVGTGGDRSNTVNISTMASLVVAASGIRVVKHGNRAASSKSGGADVLEALGVKINLGPDEVARCVREVGIGF 165          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP5 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.951e-25
Identity = 66/148 (44.59%), Postives = 86/148 (58.11%), Query Frame = 1
Query:  214 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            F  +I  + +   LT  EA A+ D +++ EA  + + A L+ LR +GET  EI G   AM      V    DAVD+VGTGGDG+ +VN+ST A+ + A CGA VAK             DVL ALGV ID+ P+ V RC+ EAGIGFM
Sbjct:    4 FKSIIGKVATGATLTRDEATAAFDAMMSGEATPSQMGALLMGLRVRGETVDEIAGAVSAMRAKMLTVTAPPDAVDVVGTGGDGSGSVNVSTCAAFIVAGCGAPVAKHGNRALSSRSGAADVLAALGVKIDITPDQVGRCIAEAGIGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_METS4 (Anthranilate phosphoribosyltransferase OS=Methylobacterium sp. (strain 4-46) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.078e-25
Identity = 65/135 (48.15%), Postives = 83/135 (61.48%), Query Frame = 1
Query:  253 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            LT  EA+ + D+LL+ E   A   AFL+ LR +GE   EIVG A A+ +   +V     A+DIVGTGGD + + N+ST ASIL AACG  VAK             DVL ALGV + LDPEG+ RC++EAG+ FM
Sbjct:   17 LTREEARTAFDHLLSGEVTHAQAGAFLMALRVRGEAQDEIVGAAGALRERMVRVVAPAGAIDIVGTGGDHSGSYNVSTLASILTAACGVPVAKHGNRAASSRSGAADVLAALGVRLGLDPEGLARCLEEAGLCFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_DESAA (Anthranilate phosphoribosyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.186e-24
Identity = 63/149 (42.28%), Postives = 89/149 (59.73%), Query Frame = 1
Query:  214 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            F+EL+  ++S  DL E E    +D +++ E +   I+AF+  L  KGETF E+ G AR+M + AT+++      VD  GTGGDGA+T NIST ++ + A CG  VAK             DVLEALGV +D  PE V + ++E GIGF+
Sbjct:    2 FSELLKKIVSGQDLAEDETTTMMDAIMSGEVEVPAIAAFMAALATKGETFTELAGAARSMRRKATRIQVSSNTVVDTCGTGGDGASTFNISTTSAFVVAGCGVTVAKHGNRSVSSKCGSADVLEALGVKLDTHPEVVEQGIEEIGIGFL 150          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPS (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.549e-24
Identity = 66/148 (44.59%), Postives = 85/148 (57.43%), Query Frame = 1
Query:  214 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            F  +I  + +   LT  EA ++ D +++ +A  + + A L+ LR +GET  EI G    M      V+   DAVDIVGTGGDG+ +VN+ST AS + A CG  VAK             DVL ALGV ID+ PE V RCV EAGIGFM
Sbjct:    4 FKAIIAKVATGATLTRDEAASAFDGMMSGDATPSQMGALLMGLRVRGETVDEITGAVSTMRAKMLTVDAPADAVDIVGTGGDGSGSVNVSTCASFIVAGCGVPVAKHGNRALSSKSGAADVLNALGVRIDITPEHVGRCVTEAGIGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_METMA (Anthranilate phosphoribosyltransferase OS=Methanosarcina mazei GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.549e-24
Identity = 65/147 (44.22%), Postives = 87/147 (59.18%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD--AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E I  L    DL+  EA+A+L+ +L+ A++  I  FL+ L+AKGE   EIVG  R M K    ++       VD  GTGGDG NT+N+ST A+I+ AA G  VAK             DVLEALG+ +DL PE VR+ +++ GIGFM
Sbjct:    6 EYIKKLEEGCDLSSEEAEAALEEVLSTAEDGEIETFLLALKAKGEKPQEIVGFVRGMKKAGNMIKPNTPFRIVDTCGTGGDGLNTINVSTAAAIVTAAAGVPVAKHGNRAATSMTGSSDVLEALGIKVDLSPEYVRKTIEKIGIGFM 152          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_HERA2 (Anthranilate phosphoribosyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.549e-24
Identity = 67/146 (45.89%), Postives = 87/146 (59.59%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            + I  + +R DL++ +A A ++ ++N EA  A I+A L  L  KGET  EI G+A+ M   +  V   G  VD  GTGGD +NT NIST A+ +AA  GA VAK             DVLE LGV I+LD EGV RC+ +AGIGFM
Sbjct:    5 DAIITVTNRTDLSQDDAAAVMEQMMNGEATPAQIAALLTALHFKGETDAEIAGMAQVMRAKSLAVPHDGGVVDTCGTGGDHSNTFNISTTAAFVAAGAGATVAKHGNRAMSSKCGSADVLEGLGVNIELDAEGVARCLRQAGIGFM 150          
The following BLAST results are available for this feature:
BLAST of FC868537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_ARTAT2.389e-2547.22Anthranilate phosphoribosyltransferase OS=Arthroba... [more]
TRPD_SYMTH3.120e-2547.45Anthranilate phosphoribosyltransferase OS=Symbioba... [more]
TRPD_GEOSF4.075e-2541.67Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_RHOSR5.322e-2545.86Anthranilate phosphoribosyltransferase OS=Rhodococ... [more]
TRPD_RHOP56.951e-2544.59Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_METS49.078e-2548.15Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_DESAA1.186e-2442.28Anthranilate phosphoribosyltransferase OS=Desulfat... [more]
TRPD_RHOPS1.549e-2444.59Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_METMA1.549e-2444.22Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_HERA21.549e-2445.89Anthranilate phosphoribosyltransferase OS=Herpetos... [more]

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Properties
Property NameValue
Genbank descriptionC31001F06EF AbioticL1 Citrus clementina cDNA clone C31001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868537 ID=FC868537; Name=FC868537; organism=Citrus clementina; type=EST; length=658bp
GGCAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTC
CTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGC
TTCGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAA
TTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCC
TCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGG
ATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAA
GCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGG
AGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATG
CTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGA
GGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGC
TGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTT
CTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGAC
TTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTT
CATGATGT
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