FC868537

Overview
NameFC868537
Unique NameFC868537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_AZOVD (Anthranilate phosphoribosyltransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=trpD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.093e-21
Identity = 59/139 (42.45%), Postives = 79/139 (56.83%), Query Frame = 1
Query:  244 RVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            R+DL  AE Q  +  ++  +  +A I AFL+ +R K E+  EIVG A  M + A  V  G+   VD  GTGGDG N  N+ST A+ + AA G +VAK             D+LEA GV ++L PE V RCV+  G+GFM
Sbjct:   13 RLDLNTAEMQGVMRQIMTGQCSDAQIGAFLMGMRMKSESIDEIVGAALVMRELAAPVTIGVERLVDTCGTGGDGMNIFNVSTAAAFVVAAAGGRVAKHGNRAVSGKSGSADLLEAAGVYLELSPEQVARCVESVGVGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD2_RALSO (Anthranilate phosphoribosyltransferase 2 OS=Ralstonia solanacearum GN=trpD2 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.093e-21
Identity = 58/118 (49.15%), Postives = 67/118 (56.78%), Query Frame = 1
Query:  301 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            A  A + A L+ LR +GET  EIVG A AM      V+   DAVDIVGTGGD A T NIST A+ + A  G  VAK             DVL ALGV +D  P  + RC+ EAGIGFM
Sbjct:   34 ASHAQLGALLMALRVRGETVEEIVGAALAMRARMVPVKAPADAVDIVGTGGDNAGTYNISTCAAFIVAGAGVPVAKHGNRALSSKSGAADVLSALGVNLDQTPADIERCIAEAGIGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_RHIME (Anthranilate phosphoribosyltransferase OS=Rhizobium meliloti GN=trpD PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.733e-21
Identity = 58/139 (41.73%), Postives = 79/139 (56.83%), Query Frame = 1
Query:  241 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            +R  L+  +A+A+ + +++  A  + I  FL+ LR +GET  EIVG   AM      VE    A+DIVGTGGDGA T NIST A+++ A  G  VAK             D L  LGV +D+ P  + RC+ EAG+GFM
Sbjct:   13 AREALSREDARAAFEIIMSGAATPSQIGGFLMALRVRGETVDEIVGAVGAMRARMLPVEAPDGAIDIVGTGGDGAGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGTADALSCLGVNLDIGPAVISRCIAEAGLGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPF (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain Pf0-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.733e-21
Identity = 57/143 (39.86%), Postives = 81/143 (56.64%), Query Frame = 1
Query:  235 LISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            ++  +DL+  E +  + + +  +  +A I AF++ +R K E+  EIVG    M + A KVE   L   VD+VGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM
Sbjct:   10 IVDHLDLSTDEMRDVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSVMRELADKVELKTLDRVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIGFM 152          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_XANCP (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris GN=trpD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21
Identity = 60/121 (49.59%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  298 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E  +A++SA L  LR K ET GEI G A  M +++ +VE       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM
Sbjct:   34 EVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTDRRHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFM 154          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_XANCB (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=trpD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21
Identity = 60/121 (49.59%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  298 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E  +A++SA L  LR K ET GEI G A  M +++ +VE       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM
Sbjct:   34 EVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTDRCHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFM 154          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_XANC8 (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=trpD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21
Identity = 60/121 (49.59%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  298 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E  +A++SA L  LR K ET GEI G A  M +++ +VE       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM
Sbjct:   34 EVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTDRRHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFM 154          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_VIBHB (Anthranilate phosphoribosyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=trpD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21
Identity = 59/148 (39.86%), Postives = 84/148 (56.76%), Query Frame = 1
Query:  217 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            N +I  L  +  LT+ E+Q   D ++  E D  L+++ L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ +AAACG KVAK             D+L++ G+ + +  E  R+ VDE G+ F+
Sbjct:    6 NPIITKLYEQESLTQEESQQLFDIIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGINLAMSAEDTRKAVDEIGVAFL 153          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_HALMA (Anthranilate phosphoribosyltransferase OS=Haloarcula marismortui GN=trpD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21
Identity = 63/150 (42.00%), Postives = 82/150 (54.67%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV----EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMM 657
            E I+ +    DLT+AEA+A    +  +A EA I A L  LRAKGET  EI G A  M   A  +    EGL   VD  GTGGD  NT+N+ST ++I+AA  G  +AK             DVLE +GV I+ +P  V   ++  GIGFM+
Sbjct:    3 EYIERVTDGDDLTQAEARAVATTVFEDATEAQIGALLTALRAKGETEAEIAGFAEGMRDAARTIRPDREGL---VDTCGTGGDDYNTINVSTTSAIVAAGAGVPIAKHGNYSVSSSSGSADVLEEVGVDIEAEPPDVEETIERDGIGFML 149          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_GEOUR (Anthranilate phosphoribosyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=trpD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21
Identity = 60/156 (38.46%), Postives = 83/156 (53.21%), Query Frame = 1
Query:  235 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE---------------GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            ++ R DLTE+E    +D +++ EA  A I+AF+  LR KGET  EI G AR M    T++                 L   +D  GTGG   NT N+ST  + + +ACG KVAK             DVLE+LGV +D+  E + RC++E GIGF+
Sbjct:    9 VVEREDLTESEMIQVMDQVMSGEATPAQIAAFITALRMKGETVAEITGAARVMRDKVTRIRVGKNILDMDRDDINVDLETILDTCGTGGSCTNTFNVSTTVAFVVSACGVKVAKHGNRSVSSACGSADVLESLGVNLDVTQETIERCINEIGIGFL 164          
The following BLAST results are available for this feature:
BLAST of FC868537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_AZOVD2.093e-2142.45Anthranilate phosphoribosyltransferase OS=Azotobac... [more]
TRPD2_RALSO2.093e-2149.15Anthranilate phosphoribosyltransferase 2 OS=Ralsto... [more]
TRPD_RHIME2.733e-2141.73Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_PSEPF2.733e-2139.86Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_XANCP3.570e-2149.59Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_XANCB3.570e-2149.59Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_XANC83.570e-2149.59Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_VIBHB3.570e-2139.86Anthranilate phosphoribosyltransferase OS=Vibrio h... [more]
TRPD_HALMA3.570e-2142.00Anthranilate phosphoribosyltransferase OS=Haloarcu... [more]
TRPD_GEOUR3.570e-2138.46Anthranilate phosphoribosyltransferase OS=Geobacte... [more]

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Properties
Property NameValue
Genbank descriptionC31001F06EF AbioticL1 Citrus clementina cDNA clone C31001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868537 ID=FC868537; Name=FC868537; organism=Citrus clementina; type=EST; length=658bp
GGCAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTC
CTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGC
TTCGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAA
TTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCC
TCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGG
ATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAA
GCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGG
AGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATG
CTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGA
GGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGC
TGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTT
CTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGAC
TTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTT
CATGATGT
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