FC868537

Overview
NameFC868537
Unique NameFC868537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_SINMW (Anthranilate phosphoribosyltransferase OS=Sinorhizobium medicae (strain WSM419) GN=trpD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21
Identity = 56/139 (40.29%), Postives = 80/139 (57.55%), Query Frame = 1
Query:  241 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            +R  L+  +A+A+ + +++  A  + I  FL+ LR +GET  EIVG   AM      V+    ++DIVGTGGDGA T NIST A+++ A  G  VAK             D L  LGV +++ PE + RC+ EAG+GFM
Sbjct:   13 AREALSRDDARAAFEIIMSGAATPSQIGGFLMALRVRGETVDEIVGAVGAMRARMLHVKAPDGSIDIVGTGGDGAGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGTADALSCLGVNLEIGPEAISRCIGEAGLGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_MYCPA (Anthranilate phosphoribosyltransferase OS=Mycobacterium paratuberculosis GN=trpD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21
Identity = 67/172 (38.95%), Postives = 89/172 (51.74%), Query Frame = 1
Query:  157 AIQTPQPAVSDNTRPQ---TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEG---LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGF 651
            A+ +   A S   RP       + +++  L    DL   +A  ++D ++  EA  A I+AF V ++ K  T  E++ LA  M+ +A          D VDIVGTGGDG NT+N+ST A+I+AAA G  V K             D LE LGV IDL PE V R V E GIGF
Sbjct:    2 ALSSESSAASAARRPSGGPATSWRQVLARLTGGDDLARGQAAWAMDQIMTGEASPAQIAAFAVAMQVKVPTSAEVIELAEVMLNHALPFPAGAIRDDTVDIVGTGGDGVNTLNLSTMAAIVAAAAGVPVVKHGNRAASSLSGGADTLEELGVRIDLGPEQVARSVAEVGIGF 173          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_MARMS (Anthranilate phosphoribosyltransferase OS=Marinomonas sp. (strain MWYL1) GN=trpD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21
Identity = 60/145 (41.38%), Postives = 79/145 (54.48%), Query Frame = 1
Query:  226 IDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            I  ++ R DL+  E Q  + D +  +A  A I  FL+ LR KGET  EI   A+ M   ++KV   L   VD  GTGGDG N  N+ST ++ + A+ G KVAK             DVLE  G+ + LD E V RCV+E G+GFM
Sbjct:    7 IAAVVERQDLSGGEMQVVMHDIMTGKATPAQIGGFLIGLRMKGETVEEITAAAQVMRSLSSKVHLDLEHVVDTCGTGGDGGNLFNVSTASAFVVASAGGKVAKHGGRSVSSKSGSADVLEQAGIYLGLDAEQVCRCVEEIGLGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_LEIXX (Anthranilate phosphoribosyltransferase OS=Leifsonia xyli subsp. xyli GN=trpD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21
Identity = 63/151 (41.72%), Postives = 86/151 (56.95%), Query Frame = 1
Query:  202 QTPCFNELIDCLISRVDLTEAEAQ-ASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGF 651
            +T  ++ ++  L++R DL+ A+A  A    +  EA +A I+AFL+ LRAKGET  EIVG   A++ +A  +     A+DIVGTGGD   TVNIST A+I+AA  G  V K             DVL ALG+ + L PE V   +   GI F
Sbjct:    3 ETQSWSSVLIALLAREDLSVADASWAMRQVMTGEATDAQIAAFLIALRAKGETVDEIVGFRDAVLDHAVGLPVNSMALDIVGTGGDRFGTVNISTTAAIVAAGAGVPVIKHGNRAASSSSGSSDVLAALGIDLTLPPERVAEVLRATGITF 153          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_DESOH (Anthranilate phosphoribosyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=trpD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21
Identity = 60/149 (40.27%), Postives = 80/149 (53.69%), Query Frame = 1
Query:  214 FNELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAV-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            F++ +  +I+R DL+  E      D       +A I AF+  L  KGETF E+ G A AM + AT+++     V D  GTGGDGA+T NIST ++ + A  G  VAK             DVLEALGV +D  PE     V+E GIGF+
Sbjct:    2 FSQTLSKIINRKDLSREEMDRIFSDIFSGNLTDAQIGAFMAALATKGETFEELAGAAEAMRRKATRIQAASPVVVDTCGTGGDGAHTFNISTTSAFVVAGAGICVAKHGNRSVSSKCGSADVLEALGVKLDTQPEVAEEAVNEIGIGFL 150          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_MARAV (Anthranilate phosphoribosyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.089e-21
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            + ++ + S +DL+  E +  +  ++N EA +A I AFL+ LR K ET  EI G    M + AT V    +  VDIVGTGGDGAN  N+S+ AS + AA G  VAK             D++E  G+ +++ PE V RCV++ G+GFM
Sbjct:    5 QALNRIASNLDLSRDEMKDVMRIVMNGEATDAQIGAFLMGLRLKSETIDEITGATEVMRELATGVTVNAEPLVDIVGTGGDGANLFNVSSAASFVVAAAGGYVAKHGNRGVSSKSGSADLIEKAGINLNMKPEEVARCVEQIGVGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_ACIAC (Anthranilate phosphoribosyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.089e-21
Identity = 59/122 (48.36%), Postives = 72/122 (59.02%), Query Frame = 1
Query:  298 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA---VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E    + +A +  LR K ET GEI   A+ M + + KV  + D    VDIVGTGGDGANT NIST A  +AAA GAK AK             DV+E+LGV IDL PE + RC+ + GIGFM
Sbjct:   34 ELSPVMTAAIVTGLRVKKETIGEITAAAQVMRELSRKV-AVADTTHLVDIVGTGGDGANTFNISTCAMFVAAAAGAKTAKHGGRGVSSKSGSADVMESLGVHIDLPPEAIARCIADTGIGFM 154          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_THEPX (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.953e-21
Identity = 60/147 (40.82%), Postives = 85/147 (57.82%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E I  ++S+ +L E EA A ++ +++  A  +LI   L+ LR KGE+  EI G A+AM   A K+E   D  +D  GTGGDG  T NIST  +I+A+A G KVAK             DVL  LG  I++ PE  +R ++E G+GF+
Sbjct:    4 EAIKKIVSKENLEEREAYAVMNEIMSGNATPSLIGGILIGLRLKGESVEEITGFAKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTAVAIIASAAGVKVAKHGNRAVSSKSGSADVLMELGFDIEMVPEKTKRLIEEKGMGFL 150          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_THEP3 (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.953e-21
Identity = 60/147 (40.82%), Postives = 85/147 (57.82%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E I  ++S+ +L E EA A ++ +++  A  +LI   L+ LR KGE+  EI G A+AM   A K+E   D  +D  GTGGDG  T NIST  +I+A+A G KVAK             DVL  LG  I++ PE  +R ++E G+GF+
Sbjct:    4 EAIKKIVSKENLEEREAYAVMNEIMSGNATPSLIGGILIGLRLKGESVEEITGFAKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTAVAIIASAAGVKVAKHGNRAVSSKSGSADVLMELGFDIEMVPEKTKRLIEEKGMGFL 150          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_RHOFD (Anthranilate phosphoribosyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.953e-21
Identity = 53/124 (42.74%), Postives = 76/124 (61.29%), Query Frame = 1
Query:  289 LLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            +  E    +++A +  LR K ET GEI   A+ M +++TKV        VDIVGTGGDG++T NIST A  +AAA GA+V+K             DV+E+LGV I+L PE + +C+++ G+GFM
Sbjct:   35 MTGEWSPVMMAALITGLRVKKETIGEITAAAQVMREFSTKVNVADTSHLVDIVGTGGDGSHTFNISTCAMFVAAAAGARVSKHGGRSVSSKSGSADVMESLGVNINLSPEAIAQCIEQVGVGFM 158          
The following BLAST results are available for this feature:
BLAST of FC868537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_SINMW4.662e-2140.29Anthranilate phosphoribosyltransferase OS=Sinorhiz... [more]
TRPD_MYCPA4.662e-2138.95Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_MARMS4.662e-2141.38Anthranilate phosphoribosyltransferase OS=Marinomo... [more]
TRPD_LEIXX4.662e-2141.72Anthranilate phosphoribosyltransferase OS=Leifsoni... [more]
TRPD_DESOH4.662e-2140.27Anthranilate phosphoribosyltransferase OS=Desulfoc... [more]
TRPD_MARAV6.089e-2140.14Anthranilate phosphoribosyltransferase OS=Marinoba... [more]
TRPD_ACIAC6.089e-2148.36Anthranilate phosphoribosyltransferase OS=Acidovor... [more]
TRPD_THEPX7.953e-2140.82Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_THEP37.953e-2140.82Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_RHOFD7.953e-2142.74Anthranilate phosphoribosyltransferase OS=Rhodofer... [more]

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Properties
Property NameValue
Genbank descriptionC31001F06EF AbioticL1 Citrus clementina cDNA clone C31001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868537 ID=FC868537; Name=FC868537; organism=Citrus clementina; type=EST; length=658bp
GGCAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTC
CTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGC
TTCGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAA
TTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCC
TCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGG
ATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAA
GCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGG
AGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATG
CTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGA
GGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGC
TGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTT
CTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGAC
TTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTT
CATGATGT
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