FC868537

Overview
NameFC868537
Unique NameFC868537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:1..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_METSB (Anthranilate phosphoribosyltransferase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.004e-23
Identity = 63/145 (43.45%), Postives = 83/145 (57.24%), Query Frame = 1
Query:  223 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            L+  L +   LT+AEA  + D +    A  A + AFL+ LR +GET  EIVG   AM     +V+   DA+DIVGTGGDG +T N+ST A+++ +ACG  VAK             DVL ALGV I LD   V  C++ AG+ FM
Sbjct:    7 LLGKLATGASLTQAEATRAFDLIFEGAATPAQLGAFLMALRVRGETIDEIVGAVAAMRARMLRVDAPADAMDIVGTGGDGHSTYNVSTLAALIVSACGVPVAKHGNRAASSQSGASDVLSALGVKIGLDSREVEACLEAAGVAFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_RHISN (Anthranilate phosphoribosyltransferase OS=Rhizobium sp. (strain NGR234) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.311e-23
Identity = 61/139 (43.88%), Postives = 81/139 (58.27%), Query Frame = 1
Query:  241 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            +R  L+  +A+A+ + +++  A  + I  FL+ LR +GET  EIVG   AM      VE   DA+DIVGTGGDGA T NIST AS++ A  G  VAK             D L  LGV +D+ PE + RC+ EAG+GFM
Sbjct:   13 AREALSREDARAAFEIIMSGAATPSQIGGFLMALRVRGETVDEIVGAVGAMRARMLPVEAPEDAIDIVGTGGDGAGTYNISTLASLIVAGAGVPVAKHGNRALSSKSGTADALSCLGVKLDIGPEAIARCIREAGVGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_PELPD (Anthranilate phosphoribosyltransferase OS=Pelobacter propionicus (strain DSM 2379) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.311e-23
Identity = 63/156 (40.38%), Postives = 85/156 (54.49%), Query Frame = 1
Query:  235 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDI---------------VGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            ++ + DLTE E    +  ++  EA  A I AF+  LR KGET  EI G AR M ++AT++    D +DI               VGTGGDG NT N+ST  + + +ACG KVAK             DVLE LGV +D+ PE V +C+ + GIGF+
Sbjct:    9 IVEQKDLTEGEMIEVMGQIMTGEATPAQIGAFITALRMKGETIDEITGAARVMREHATRIRAGKDLLDIDRDDINIDRETILDVVGTGGDGTNTFNVSTTVAFVVSACGVKVAKHGNRSVSSLCGSADVLEKLGVNLDITPETVEQCITKIGIGFL 164          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_THISH (Anthranilate phosphoribosyltransferase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.712e-23
Identity = 62/147 (42.18%), Postives = 85/147 (57.82%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            + I  +  R+DL+E E  A +  ++N EA  A +  FLV L  KGET  E+   AR M   AT+VE   G  VD  GTGGD + + NIST ++++ AA G +VAK             DVLEA GV +DL PE V RC+++ G+GF+
Sbjct:    5 QAIRAVTQRIDLSEQEMTAVMGLIMNGEATPAQMGGFLVGLAMKGETVDEVTAAARVMRDLATRVEVQAGHLVDTCGTGGDASGSFNISTASALVVAAAGGRVAKHGNRSVSSKSGSADVLEAAGVNLDLSPEQVARCIEQVGVGFL 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_RUBXD (Anthranilate phosphoribosyltransferase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.712e-23
Identity = 59/135 (43.70%), Postives = 79/135 (58.52%), Query Frame = 1
Query:  253 LTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            L+E EA+ +L+ ++   A     +A L  LR +GE+  EIVG ARAM ++A +V      VD  GTGGD   T+N+ST A+ +A   G  +AK             DVLEALG  I+L PE V RC++EAGIGFM
Sbjct:   15 LSEGEAERALETIMEGGASPEATAALLTALRVRGESVQEIVGFARAMRRFAARVRAPEGVVDTCGTGGDAKGTINVSTAAAFVARGAGVVIAKHGNRAATSRAGSADVLEALGAAIELSPEQVSRCIEEAGIGFM 149          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_NITWN (Anthranilate phosphoribosyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.712e-23
Identity = 63/145 (43.45%), Postives = 84/145 (57.93%), Query Frame = 1
Query:  223 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            LI  + +   LT  EA A+ + +++ EA  + +   L+ LR +GET  EI G   AM     +V+   DAVD+VGTGGDG+ +VN+ST AS + A  G  VAK             D L ALG+ IDL PE V RC++EAGIGFM
Sbjct:    7 LIGKVATGATLTREEAAAAFNSMMSGEATPSQMGGLLMALRVRGETVDEITGAVSAMRSMMLRVKAPVDAVDVVGTGGDGSGSVNVSTCASFIVAGAGVTVAKHGNRALSSRSGAADCLAALGIRIDLTPEQVGRCINEAGIGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_GEOMG (Anthranilate phosphoribosyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.712e-23
Identity = 66/156 (42.31%), Postives = 88/156 (56.41%), Query Frame = 1
Query:  235 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV---EGLGDA------------VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            ++ R+DLTEAE    +D +++ EA  A I++F+  LR KGET  EI G AR M   AT +   +G+ D             +D+VGTGGDG NT NIST  S + A+CG KVAK             DVLE+LGV +D+ PE V   +   GIGF+
Sbjct:    9 VVERIDLTEAEMIEVMDQIMSGEATPAQIASFITALRMKGETVEEITGAARVMRDRATPIRVGKGVLDIDRDDINIDQETILDVVGTGGDGTNTFNISTTVSFVVASCGVKVAKHGNRAVSSACGSADVLESLGVSLDVTPETVENAIARIGIGFL 164          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_AGRRK (Anthranilate phosphoribosyltransferase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.712e-23
Identity = 63/139 (45.32%), Postives = 79/139 (56.83%), Query Frame = 1
Query:  241 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            +R  LT  EA+ + D L++ EA  + I AFL+ LR +GET  EIVG   AM      VE   DA+DIVGTGGDG  T NIST A+ + A  G  VAK             D    LG+ +D+ PE + RC+ EAGIGFM
Sbjct:   13 NREVLTRDEARQAFDILMSGEATPSQIGAFLMALRVRGETVDEIVGAVTAMRAKMLPVEAPADAIDIVGTGGDGFGTYNISTLAAFIVAGAGVPVAKHGNRAQSSKAGTADTQSVLGIKLDIGPEVIARCIREAGIGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_NATPD (Anthranilate phosphoribosyltransferase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=trpD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.236e-23
Identity = 60/137 (43.80%), Postives = 78/137 (56.93%), Query Frame = 1
Query:  250 DLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMM 657
            DLT+AEA+ +   +  EA EA I A L  LRAKGET  EI G A  M   A +++      VD  GTGGDG +T+N+ST +S + A  G  VAK             DVLE +GV ID +P  V  C++E G+GFM+
Sbjct:   13 DLTQAEAREAASLVFEEATEAQIGALLSALRAKGETEPEIAGFAEGMRAAARRIDPDRSPLVDTCGTGGDGHDTINVSTTSSFVVAGAGVPVAKHGNYSVSSSSGSADVLEEIGVTIDAEPPAVETCIEETGMGFML 149          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_METAC (Anthranilate phosphoribosyltransferase OS=Methanosarcina acetivorans GN=trpD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.236e-23
Identity = 62/147 (42.18%), Postives = 86/147 (58.50%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD--AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E I  L    DL+  EA+A++  +L+ A++  I AFL+ LRAKGE   EI G  R M +    ++ +     +D  GTGGDG NT+N+ST A+I+ AA G  VAK             DVLEALG+ +DL P  VR+ +++ GIGFM
Sbjct:    6 EYIKKLEEGSDLSSEEAEAAIGEILSTAEDEEIGAFLLALRAKGEKPQEIAGFVRGMKQAGNTIKPVTPFRVIDTCGTGGDGLNTINVSTAAAIVTAAAGVPVAKHGNRAATSMSGSSDVLEALGIKVDLTPGQVRKTIEKIGIGFM 152          
The following BLAST results are available for this feature:
BLAST of FC868537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_METSB1.004e-2343.45Anthranilate phosphoribosyltransferase OS=Methyloc... [more]
TRPD_RHISN1.311e-2343.88Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_PELPD1.311e-2340.38Anthranilate phosphoribosyltransferase OS=Pelobact... [more]
TRPD_THISH1.712e-2342.18Anthranilate phosphoribosyltransferase OS=Thioalka... [more]
TRPD_RUBXD1.712e-2343.70Anthranilate phosphoribosyltransferase OS=Rubrobac... [more]
TRPD_NITWN1.712e-2343.45Anthranilate phosphoribosyltransferase OS=Nitrobac... [more]
TRPD_GEOMG1.712e-2342.31Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_AGRRK1.712e-2345.32Anthranilate phosphoribosyltransferase OS=Agrobact... [more]
TRPD_NATPD2.236e-2343.80Anthranilate phosphoribosyltransferase OS=Natronom... [more]
TRPD_METAC2.236e-2342.18Anthranilate phosphoribosyltransferase OS=Methanos... [more]

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Properties
Property NameValue
Genbank descriptionC31001F06EF AbioticL1 Citrus clementina cDNA clone C31001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868537 ID=FC868537; Name=FC868537; organism=Citrus clementina; type=EST; length=658bp
GGCAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTC
CTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGC
TTCGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAA
TTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCC
TCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGG
ATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAA
GCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGG
AGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATG
CTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGA
GGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGC
TGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTT
CTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGAC
TTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTT
CATGATGT
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