FC868537

Overview
NameFC868537
Unique NameFC868537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:1..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA8 (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=trpD PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.110e-22
Identity = 60/143 (41.96%), Postives = 84/143 (58.74%), Query Frame = 1
Query:  235 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            +++++DLT  E QA +  ++  +  +A I AFL+ +R K ET  EIVG    M + A  V+   L   VD+VGTGGDGAN  N+S+ AS + AA G KVAK             D+LEA G+ ++L  E V RC+D  G+GFM
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVGFM 152          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_NOCFA (Anthranilate phosphoribosyltransferase OS=Nocardia farcinica GN=trpD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.449e-22
Identity = 64/144 (44.44%), Postives = 87/144 (60.42%), Query Frame = 1
Query:  223 LIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGF 651
            ++  L    DL+ A+   +++ ++++ A  A I+AF V ++ KG T  E+ GLA  M ++A  V   GDAVDIVGTGGD + +VNIST +SI+ AA G  V K             DVLEALGV ++L PE V RCV E GIGF
Sbjct:    1 MLGALADGRDLSAADTAWAMNEIMSDNATSAQIAAFGVAIKIKGPTPEELGGLATGMFEHARLVSIDGDAVDIVGTGGDRSGSVNISTMSSIVVAAAGVPVVKHGNRAASSKSGGADVLEALGVRLNLGPEAVARCVREVGIGF 144          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_MYCGI (Anthranilate phosphoribosyltransferase OS=Mycobacterium gilvum (strain PYR-GCK) GN=trpD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.449e-22
Identity = 68/165 (41.21%), Postives = 90/165 (54.55%), Query Frame = 1
Query:  169 PQPAVSDNTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV--EGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGF 651
            P+PA        TP +  ++  L +   L   +   ++D ++   A  A I+AF V ++ K  T  E+  LA  M+K+A  V  + +G   VDIVGTGGDGANTVN+ST ASI+ AA G  V K             D LEALG+ IDL P+ V RCV E GIGF
Sbjct:    6 PRPAAPTTDPGDTPTWAMILGRLTTGQSLLPGQTAWAMDQIMTGVATPAQIAAFAVSMKMKRPTSAEVTELAEIMLKHALPVPTDTIGTHTVDIVGTGGDGANTVNLSTMASIVVAAAGVPVVKHGNRAASSLSGGADTLEALGLRIDLGPDDVARCVAEVGIGF 170          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_METBF (Anthranilate phosphoribosyltransferase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=trpD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.449e-22
Identity = 61/137 (44.53%), Postives = 79/137 (57.66%), Query Frame = 1
Query:  250 DLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD--AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            DL+  EA+ ++  +L+ A +  I  FL+ LRAKGE   EI G  R M K    +        VD  GTGGDG NT+NIST A+I+ AA G  VAK             DVL+ALG+  DL+PE VR+ ++E GIGFM
Sbjct:   13 DLSPEEAEDAVGKILSTAQDEEIGRFLLALRAKGEKPEEIAGFVRGMKKAGKTIRPKTSFRLVDTCGTGGDGLNTINISTAAAIVTAAAGVPVAKHGNRAATSMSGSSDVLDALGIKTDLEPEAVRQTIEEIGIGFM 149          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_DEHSC (Anthranilate phosphoribosyltransferase OS=Dehalococcoides sp. (strain CBDB1) GN=trpD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.449e-22
Identity = 62/146 (42.47%), Postives = 83/146 (56.85%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E I  L+    LT  ++ + +D ++  +   A I AFL  LR KGET  EI GLA  M   +T++      +DIVG GGDG NT NIST A+ + +  G KVAK             DVLEALG+ IDL+ E V+ C+++ GIGFM
Sbjct:    4 EAIGSLVLGKSLTLEQSASVMDEIMEGKTTPAQIGAFLTALRVKGETAEEIAGLANVMRAKSTRISTSTPVLDIVGIGGDGINTFNISTTAAFVISGAGIKVAKHGNRAASSMCGSADVLEALGIKIDLNAEQVKICIEQIGIGFM 149          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_DEHE1 (Anthranilate phosphoribosyltransferase OS=Dehalococcoides ethenogenes (strain 195) GN=trpD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.449e-22
Identity = 62/146 (42.47%), Postives = 83/146 (56.85%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E I  L+    LT  ++ + +D ++  +   A I AFL  LR KGET  EI GLA  M   +T++      +DIVG GGDG NT NIST A+ + +  G KVAK             DVLEALG+ IDL+ E V+ C+++ GIGFM
Sbjct:    4 EAIGSLVLGKSLTLEQSASVMDEIMEGKTTPAQIGAFLTALRVKGETAEEIAGLANVMRAKSTRISTSTPVLDIVGIGGDGINTFNISTTAAFVISGAGIKVAKHGNRAASSMCGSADVLEALGIKIDLNAEQVKICIEQIGIGFM 149          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_RHILO (Anthranilate phosphoribosyltransferase OS=Rhizobium loti GN=trpD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.893e-22
Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  253 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            L+  EA+ + D +++ +A    I  FL+ LR +GET  EI G    M     +VE    A+DIVGTGGD +++VNISTG++ + AA G  VAK             DVL ALGV ID+ P+ + RC+ EAG+GFM
Sbjct:   17 LSFEEAREAFDIIMSGDATPGQIGGFLMALRVRGETVSEISGAVATMRAKMLRVEAPAGAIDIVGTGGDNSHSVNISTGSAFVIAAAGVPVAKHGNRGLSSLTGAADVLIALGVKIDIPPDAIGRCIHEAGVGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_PSEU2 (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.893e-22
Identity = 62/143 (43.36%), Postives = 82/143 (57.34%), Query Frame = 1
Query:  235 LISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            +++++DLT  E +    + +  +  EA I AFL+ +R K ET  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ + AA G  VAK             D+LEA GV ++L P  V RC+D  GIGFM
Sbjct:   14 VVNQLDLTTEEMSDVMREIMTGQCTEAQIGAFLMGMRMKSETIDEIVGAVSVMRELAGKVELKTLDGVVDIVGTGGDGANIFNVSTASAFVIAAAGCTVAKHGNRAVSGKSGSADLLEAAGVYLNLTPVQVARCIDSVGIGFM 156          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPU (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida GN=trpD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.893e-22
Identity = 61/143 (42.66%), Postives = 82/143 (57.34%), Query Frame = 1
Query:  235 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM
Sbjct:   10 IVGQLDLTTEEMRDVMRQIMTGQCTEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFM 152          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA7 (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.893e-22
Identity = 60/143 (41.96%), Postives = 83/143 (58.04%), Query Frame = 1
Query:  235 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            +++++DLT  E QA +  ++     +A I AFL+ +R K ET  EIVG    M + A  V+   L   VD+VGTGGDGAN  N+S+ AS + AA G KVAK             D+LEA G+ ++L  E V RC+D  G+GFM
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGRCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVGFM 152          
The following BLAST results are available for this feature:
BLAST of FC868537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PSEA81.110e-2241.96Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_NOCFA1.449e-2244.44Anthranilate phosphoribosyltransferase OS=Nocardia... [more]
TRPD_MYCGI1.449e-2241.21Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_METBF1.449e-2244.53Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_DEHSC1.449e-2242.47Anthranilate phosphoribosyltransferase OS=Dehaloco... [more]
TRPD_DEHE11.449e-2242.47Anthranilate phosphoribosyltransferase OS=Dehaloco... [more]
TRPD_RHILO1.893e-2242.96Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_PSEU21.893e-2243.36Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEPU1.893e-2242.66Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEA71.893e-2241.96Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]

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Properties
Property NameValue
Genbank descriptionC31001F06EF AbioticL1 Citrus clementina cDNA clone C31001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868537 ID=FC868537; Name=FC868537; organism=Citrus clementina; type=EST; length=658bp
GGCAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTC
CTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGC
TTCGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAA
TTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCC
TCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGG
ATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAA
GCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGG
AGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATG
CTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGA
GGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGC
TGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTT
CTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGAC
TTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTT
CATGATGT
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