FC868537

Overview
NameFC868537
Unique NameFC868537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_PARL1 (Anthranilate phosphoribosyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.893e-22
Identity = 62/148 (41.89%), Postives = 86/148 (58.11%), Query Frame = 1
Query:  214 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            F  +I  L     L  AEA+A+ + +++ EA +A I AFL+ LR +GET  EI   A  M + A +V    +A+DIVGTGGDG  T NIST  +++ AA G  VAK             D L+ALGV +D+DP  +   +++AGIGFM
Sbjct:    4 FKTIIARLAEGRALDAAEARAAFEIVMSGEATQAQIGAFLMGLRVRGETVAEITAGATVMRERALRVTAPANAIDIVGTGGDGVGTWNISTATALVVAAAGVPVAKHGNRKASSLSGTADALQALGVNLDIDPATIAASIEKAGIGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_BRASO (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=trpD PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.893e-22
Identity = 60/135 (44.44%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  253 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            L+  +A ++ D +++ EA  + + A L+ LR +GET  EI G    M     +V+   +AVDIVGTGGDG+ +VN+ST AS + A  G  VAK             DVL ALGV IDL P+ V RC+ EAGIGFM
Sbjct:   17 LSREQAASAFDSMMSGEATPSQMGALLMALRVRGETVEEITGAVSVMRAKMLRVDAPANAVDIVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGNRALSSRSGAADVLAALGVKIDLKPDQVGRCIREAGIGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_BRASB (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.893e-22
Identity = 61/135 (45.19%), Postives = 79/135 (58.52%), Query Frame = 1
Query:  253 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            L+  EA ++ D +++ EA  + + A L+ LR +GET  EI G    M     +V+    AVDIVGTGGDG+ +VN+ST A+ + A  G  VAK             DVL ALGV IDL P+ V RCV EAGIGFM
Sbjct:   17 LSREEAASAFDSMMSGEATPSQMGALLMALRVRGETVEEITGAVSVMRAKMLRVDAPAGAVDIVGTGGDGSGSVNVSTCAAFIVAGAGIPVAKHGNRALSSRSGAADVLAALGVKIDLKPDQVGRCVQEAGIGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_THICR (Anthranilate phosphoribosyltransferase OS=Thiomicrospira crunogena (strain XCL-2) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22
Identity = 66/149 (44.30%), Postives = 88/149 (59.06%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA---VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            + ++ L+++ DLT  + +  +  L++ +A  A I+A LV LRAKGET  EI   A  M   AT+V  L D    VD  GTGGDGANT NIST ++ +AAA GAKVAK             D+LE  GV ++L PE V  CV+  G+GFM
Sbjct:    5 DALEQLLNKHDLTAEQMEWVMQMLMSGQATSAQIAAILVALRAKGETVEEITAAASVMRSLATQVT-LTDKTHMVDTCGTGGDGANTFNISTASAFVAAAAGAKVAKHGSRSVSSQSGSADLLEKAGVNLNLTPEQVAECVETVGVGFM 152          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_NITOC (Anthranilate phosphoribosyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22
Identity = 60/140 (42.86%), Postives = 83/140 (59.29%), Query Frame = 1
Query:  241 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            +R +LT  E  + ++ +++ +A  A I   L+ LR KGET  EI   AR M + ATKV   G   VD  GTGGDGANT NIST ++ + AA G +VAK             DVLEA G+ ++L PE + RC++E G+GF+
Sbjct:   12 TRRNLTSEEMTSVMNLIMSGQATPAQIGGLLIGLRMKGETVEEIAAAARVMRELATKVTVTGPHLVDTCGTGGDGANTFNISTASAFVVAAAGGRVAKHGNRSVSSQCGSADVLEAAGIKLELTPEQIARCIEELGVGFL 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_CARHZ (Anthranilate phosphoribosyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22
Identity = 68/150 (45.33%), Postives = 89/150 (59.33%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYA----TKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E+++ L+   +L  +EA A+++ L+  +  EA ++AFLV L+ KGET  EI   A A+ + A    T+ EGL   VD  GTGGDG  T NIST A+ + A  G  VAK             DVLEALGV IDLD +G  RCVDE GIGF+
Sbjct:    4 EVLERLMRGENLNFSEALATMNELMEGKYTEAQVAAFLVALKMKGETEEEISAFALALREKARRVITQTEGL---VDTCGTGGDGRQTFNISTAAAFVVAGAGIPVAKHGNRSVSSRSGSADVLEALGVNIDLDAKGTARCVDEIGIGFL 150          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_PSEU5 (Anthranilate phosphoribosyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22
Identity = 62/147 (42.18%), Postives = 83/147 (56.46%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E ++ ++ ++DLT  E QA +  ++  +  +A + AFL+ +R K ET  EIVG  + M + A  V    D  VD  GTGGDG N  N+ST AS + AA G KVAK             D+LEA GV +DL PE V R VD  G+GFM
Sbjct:    5 EALNRIVGQLDLTTEEMQAVMRQIMTGQCTDAQVGAFLMGMRMKSETIDEIVGAVQVMRELAAPVRFDTDKLVDTCGTGGDGMNIFNVSTAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGVFLDLTPEQVARSVDTVGVGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_CLOTH (Anthranilate phosphoribosyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22
Identity = 63/145 (43.45%), Postives = 84/145 (57.93%), Query Frame = 1
Query:  226 IDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV-EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            I  L+   +L+E+E   +LD ++  +A  A I +F+  LR KGET  EI G A+ M   A K+   +   +D  GTGGDG NT NIST  + +AAA G  VAK             DVLEALGV IDLDP  V+ C+++ GIGF+
Sbjct:    6 ISKLVEGKNLSESEIIEALDCIMEGKATPAQIGSFITALRIKGETIEEITGCAKVMRAKADKICPNVDYYIDTCGTGGDGTNTFNISTATAFVAAAGGVYVAKHGNRSVSSKSGSADVLEALGVNIDLDPVQVKECIEKVGIGFI 150          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_AGRVS (Anthranilate phosphoribosyltransferase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=trpD PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22
Identity = 60/135 (44.44%), Postives = 77/135 (57.04%), Query Frame = 1
Query:  253 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            LT  EA  + + L++ EA  A I  FL+ LR +GET  EIVG    M +    V    D++DIVGTGGDG  T NIST A+++ A  G  VAK             D L ALGV +D+DP  + RC+ EAG+GFM
Sbjct:   17 LTRDEAADAFNILMSGEATPAQIGGFLIALRMRGETVPEIVGAVTVMRQKMLPVIAPTDSIDIVGTGGDGTGTYNISTLAALIVAGAGVPVAKHGNKALSSKSGAADSLTALGVKLDIDPSVIGRCISEAGVGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_PSEFS (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.217e-22
Identity = 58/143 (40.56%), Postives = 81/143 (56.64%), Query Frame = 1
Query:  235 LISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            ++  +DL+ AE +    + +  +  +A I AF++ +R K E+  EIVG    M + A KVE   L   VD+VGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM
Sbjct:   10 IVGHLDLSTAEMSDVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSVMRELADKVELKTLDGVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIGFM 152          
The following BLAST results are available for this feature:
BLAST of FC868537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PARL11.893e-2241.89Anthranilate phosphoribosyltransferase OS=Parvibac... [more]
TRPD_BRASO1.893e-2244.44Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_BRASB1.893e-2245.19Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_THICR2.472e-2244.30Anthranilate phosphoribosyltransferase OS=Thiomicr... [more]
TRPD_NITOC2.472e-2242.86Anthranilate phosphoribosyltransferase OS=Nitrosoc... [more]
TRPD_CARHZ2.472e-2245.33Anthranilate phosphoribosyltransferase OS=Carboxyd... [more]
TRPD_PSEU53.229e-2242.18Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_CLOTH3.229e-2243.45Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_AGRVS3.229e-2244.44Anthranilate phosphoribosyltransferase OS=Agrobact... [more]
TRPD_PSEFS4.217e-2240.56Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]

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Properties
Property NameValue
Genbank descriptionC31001F06EF AbioticL1 Citrus clementina cDNA clone C31001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868537 ID=FC868537; Name=FC868537; organism=Citrus clementina; type=EST; length=658bp
GGCAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTC
CTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGC
TTCGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAA
TTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCC
TCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGG
ATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAA
GCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGG
AGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATG
CTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGA
GGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGC
TGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTT
CTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGAC
TTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTT
CATGATGT
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