FC868537

Overview
NameFC868537
Unique NameFC868537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_SALTO (Anthranilate phosphoribosyltransferase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=trpD PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.394e-22
Identity = 67/148 (45.27%), Postives = 84/148 (56.76%), Query Frame = 1
Query:  223 LIDCLISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV----EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGF 651
            L+  L+   +L  A+ A A  + +   A  A I+ F V LRAKGET  E+ GL  AM+ +A  V    E    AVD+VGTGGD A+TVNIST AS++ A  G +V K             DVLE LG+ +DL PE V  CV EAGIGF
Sbjct:    9 LLAALLRGDELCTADTAWAMGEIMSGSAGPAQIAGFAVALRAKGETPTELAGLVEAMLTHAVPVNLPAELRATAVDVVGTGGDLAHTVNISTMASLVVAGAGVRVVKHGNRAASSSCGTADVLEFLGLPLDLGPEAVATCVAEAGIGF 156          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_BRAJA (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium japonicum GN=trpD PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.394e-22
Identity = 62/145 (42.76%), Postives = 81/145 (55.86%), Query Frame = 1
Query:  223 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            +I  + +   L+  EA ++ D +++ EA  + +   L+ LR +GET  EI G   AM      V    DAVDIVGTGGDG+ +VN+ST AS + +  G  VAK             DVL +LGV IDL PE V RCV E GIGFM
Sbjct:    7 IIGKVATGASLSRDEAASAFDAMMSGEATPSQMGGLLMALRVRGETVDEITGAVAAMRSKMLTVTAPPDAVDIVGTGGDGSGSVNVSTCASFIVSGAGVPVAKHGNRALSSRSGAADVLASLGVRIDLRPEQVGRCVRECGIGFM 151          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_PSESM (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. tomato GN=trpD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.227e-21
Identity = 60/143 (41.96%), Postives = 83/143 (58.04%), Query Frame = 1
Query:  235 LISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            +++++DL+  E +  + + +  +  EA I AFL+ +R K ET  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ + +A G  VAK             D+LEA GV ++L P  V RC+D  GIGFM
Sbjct:   10 VVNQLDLSTDEMRDVMREIMTGQCTEAQIGAFLMGMRMKSETIDEIVGAVSVMRELADKVELKTLDGVVDIVGTGGDGANIFNVSTASAFVISAAGCTVAKHGNRAVSGKSGSADLLEAAGVYLNLTPVQVARCIDSVGIGFM 152          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPG (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain GB-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.227e-21
Identity = 59/143 (41.26%), Postives = 81/143 (56.64%), Query Frame = 1
Query:  235 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            ++  +DL+  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM
Sbjct:   10 IVGHLDLSTEEMRDVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASAFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFM 152          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD2_STRCO (Anthranilate phosphoribosyltransferase 2 OS=Streptomyces coelicolor GN=trpD2 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.227e-21
Identity = 61/136 (44.85%), Postives = 80/136 (58.82%), Query Frame = 1
Query:  253 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            LTEAEA  ++  ++  EA  A I+AF + +  +G +   + G+ARA  ++AT V   G D +D  GTGGDG NT NIST A+I+AAACG +VAK             DVLE LGV IDL  E    C+D  GI F+
Sbjct:    5 LTEAEAADAMRVIMRGEATAAQIAAFALAVTVRGASADNLAGMARAAQEFATPVPRAGGDLLDTCGTGGDGLNTFNISTAAAIVAAACGVRVAKHGNRSASSACGSADVLEELGVRIDLGAEEAAACLDRTGITFL 140          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_PSEE4 (Anthranilate phosphoribosyltransferase OS=Pseudomonas entomophila (strain L48) GN=trpD PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21
Identity = 59/143 (41.26%), Postives = 81/143 (56.64%), Query Frame = 1
Query:  235 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            ++  +DL+  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM
Sbjct:   10 IVGHLDLSTEEMRDVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASAFVIAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDSLGIGFM 152          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_POLSJ (Anthranilate phosphoribosyltransferase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=trpD PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21
Identity = 55/121 (45.45%), Postives = 76/121 (62.81%), Query Frame = 1
Query:  298 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E    +++A +  LR K ET GEI   A+ M +++TKV        VDIVGTGGDG++T NIST +  +AAA GAKV+K             DV+EALG+ I+L PE + +C++EAG+GFM
Sbjct:   38 EMSPVMMAALITGLRVKKETIGEITAAAQVMREFSTKVHVADKTHLVDIVGTGGDGSHTFNISTCSMFVAAAAGAKVSKHGGRSVSSKSGSADVMEALGININLMPEAIAKCIEEAGVGFM 158          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_PHOPR (Anthranilate phosphoribosyltransferase OS=Photobacterium profundum GN=trpD PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21
Identity = 60/147 (40.82%), Postives = 83/147 (56.46%), Query Frame = 1
Query:  220 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            E+ D L ++  LT+ E+    D ++  + D  L+SA L  L+ KGET  EI G A A++  A        D  DIVGTGGDGANT+NIST A+ +AAACG KVAK             D+L+  G+ + + PE  R  +DE G+ F+
Sbjct:   10 EIADKLYAQQALTQDESHVLFDAIIKGDVDPILLSAVLTALKIKGETPAEIAGAASALLANANAFPSPEYDFADIVGTGGDGANTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLDKFGINLAMTPENARGALDELGVCFL 156          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_MOOTA (Anthranilate phosphoribosyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=trpD PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21
Identity = 61/145 (42.07%), Postives = 82/145 (56.55%), Query Frame = 1
Query:  226 IDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            I  +++   L+EAEA  ++D ++  EA  A I+AFL  LR KGE   EI G AR+M + A  +       VD  GTGGDG  T NIST A+ + A  G  VAK             D+LEALG+ +DL P+ V RC+DE G+ F+
Sbjct:    6 ISKVVAGQHLSEAEAAEAMDIIMAGEATPAQIAAFLTALRLKGEMVDEITGFARSMRRRAIPLTTSHPVFVDTCGTGGDGRQTFNISTTAAFVVAGAGVAVAKHGNRSVSSRCGSADMLEALGIKVDLPPDAVARCLDEVGMAFL 150          
BLAST of FC868537 vs. ExPASy Swiss-Prot
Match: TRPD_OLICO (Anthranilate phosphoribosyltransferase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=trpD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.093e-21
Identity = 60/148 (40.54%), Postives = 82/148 (55.41%), Query Frame = 1
Query:  214 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFM 654
            F  ++  L     L+  EA A+ D+L++ EA  + I   L+ +R +GET  EI G    M     +V    DAVD+VGTGGDG+ +VN+ST A+ + A  G  VAK             DVL +LGV I+L PE V  C+ +AGIGFM
Sbjct:    4 FKAILAKLADGKSLSRDEAVAAFDHLMSGEATPSQIGGALMAMRVRGETVDEITGAVSTMRAKMLRVTAPDDAVDVVGTGGDGSGSVNVSTCAAFIVAGAGVPVAKHGNRAMSSKSGAADVLASLGVNIELTPEQVGACIAKAGIGFM 151          
The following BLAST results are available for this feature:
BLAST of FC868537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_SALTO9.394e-2245.27Anthranilate phosphoribosyltransferase OS=Salinisp... [more]
TRPD_BRAJA9.394e-2242.76Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_PSESM1.227e-2141.96Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEPG1.227e-2141.26Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD2_STRCO1.227e-2144.85Anthranilate phosphoribosyltransferase 2 OS=Strept... [more]
TRPD_PSEE41.602e-2141.26Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_POLSJ1.602e-2145.45Anthranilate phosphoribosyltransferase OS=Polaromo... [more]
TRPD_PHOPR1.602e-2140.82Anthranilate phosphoribosyltransferase OS=Photobac... [more]
TRPD_MOOTA1.602e-2142.07Anthranilate phosphoribosyltransferase OS=Moorella... [more]
TRPD_OLICO2.093e-2140.54Anthranilate phosphoribosyltransferase OS=Oligotro... [more]

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Properties
Property NameValue
Genbank descriptionC31001F06EF AbioticL1 Citrus clementina cDNA clone C31001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868537 ID=FC868537; Name=FC868537; organism=Citrus clementina; type=EST; length=658bp
GGCAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTC
CTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGC
TTCGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAA
TTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCC
TCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGG
ATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAA
GCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGG
AGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATG
CTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGA
GGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGC
TGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTT
CTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGAC
TTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTT
CATGATGT
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