FC868539

Overview
NameFC868539
Unique NameFC868539
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig17 contig Ccv1_Contig17:112..787. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_PROMP (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=acsF PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.270e-45
Identity = 85/149 (57.05%), Postives = 114/149 (76.51%), Query Frame = 3 
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K   K+T+LTP FYTTDF+ ME     +++  +N+ E EA+ +EF+ DYN+ HFVRNKEF+ AADK+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK ++DF   LDLGF+T  + YT+
Sbjct:   18 KDIAKDTILTPNFYTTDFEAME-----KMDLSINEDELEAICEEFRKDYNRHHFVRNKEFEGAADKIDAETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMNDFGLQLDLGFLTANKDYTY 161
[Close]
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_PROM5 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9515) GN=acsF PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.270e-45
Identity = 85/149 (57.05%), Postives = 114/149 (76.51%), Query Frame = 3 
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K   K+T+LTP FYTTDF+ ME     +++  +N+ E EA+ +EF+ DYN+ HFVRNKEF+ AADK+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK ++DF   LDLGF+T  + YT+
Sbjct:   18 KDIAKDTILTPNFYTTDFEAME-----KMDLSINEEELEAICEEFRKDYNRHHFVRNKEFEGAADKLDPETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMNDFGLQLDLGFLTANKDYTY 161
[Close]
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_PROM9 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9312) GN=acsF PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.080e-44
Identity = 86/149 (57.72%), Postives = 112/149 (75.17%), Query Frame = 3 
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K   KET+L+PRFYTTDF+ ME +     +  +N+ E EA+ +EF+ DYN+ HFVRN EF  AA+K+    R++FV+FLE SCT+EFSGFLLYKEL RR+K  NP++AE F+ M+RDEARHAGFLNK +SDF   LDLGF+T  + YT+
Sbjct:   18 KIPAKETILSPRFYTTDFEAMENM-----DLSINEEELEAICEEFRKDYNRHHFVRNSEFDGAAEKLDPETRELFVDFLEGSCTSEFSGFLLYKELSRRIKDKNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYTY 161
[Close]
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_PROM2 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9215) GN=acsF PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.080e-44
Identity = 85/149 (57.05%), Postives = 114/149 (76.51%), Query Frame = 3 
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K   K+T+LTP FYTTDF+ ME     +++  +N+ E EA+ +EF+ DYN+ HFVRNKEF+ AADK+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK ++DF   LDLGF+T  + YT+
Sbjct:   18 KEIAKDTILTPNFYTTDFEAME-----KMDLSINEDELEAICEEFRKDYNRHHFVRNKEFEGAADKLDPETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMNDFGLQLDLGFLTANKDYTY 161
[Close]
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_PROM0 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9301) GN=acsF PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.080e-44
Identity = 85/149 (57.05%), Postives = 113/149 (75.84%), Query Frame = 3 
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K   KET+L+PRFYTTDF+ ME +     +  +N+ E EA+ +EF+ DYN+ HFVRN EF+ AA+K+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK +SDF   LDLGF+T  + YT+
Sbjct:   18 KAPAKETILSPRFYTTDFEAMENM-----DLSINEEELEAICEEFRKDYNRHHFVRNSEFEGAAEKLDPETRELFVDFLEGSCTSEFSGFLLYKELSKRIKDKNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYTY 161
[Close]
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_PROMS (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain AS9601) GN=acsF PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.842e-44
Identity = 85/149 (57.05%), Postives = 113/149 (75.84%), Query Frame = 3 
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K   KET+L+PRFYTTDF+ ME +     +  +N+ E EA+ +EF+ DYN+ HFVRN EF+ AA+K+    R++FV+FLE SCT+EFSGFLLYKEL +R+K  NP++AE F+ M+RDEARHAGFLNK +SDF   LDLGF+T  + YT+
Sbjct:   18 KIPAKETILSPRFYTTDFEAMENM-----DLSINEEELEAICEEFRKDYNRHHFVRNSEFEGAAEKLDPETRELFVDFLEGSCTSEFSGFLLYKELSKRIKVKNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKDYTY 161
[Close]
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF2_ANASP (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2 OS=Anabaena sp. (strain PCC 7120) GN=acsF2 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.406e-44
Identity = 84/149 (56.38%), Postives = 112/149 (75.17%), Query Frame = 3 
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K  ++ETLLTPRFYTTDFD +  L     +   N+ E  A+++E + DYN+ HFVR++EFK++ D + G  R+ F++FLERSCT+EFSGFLL+KEL RR+K  NP++AE F  M+RDEARHAGFLNK +SD N +LDL ++TK R YTF
Sbjct:   18 KAPVQETLLTPRFYTTDFDAVANL-----DISANETEIRAIVEELRADYNRHHFVRDEEFKQSWDHITGEKRRAFIDFLERSCTSEFSGFLLFKELSRRIKSRNPLLAEAFEFMARDEARHAGFLNKSMSDLNLSLDLNYLTKNRTYTF 161
[Close]
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_SYNP6 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=acsF PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.143e-44
Identity = 86/149 (57.72%), Postives = 111/149 (74.50%), Query Frame = 3 
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K   KET+LTPRFYTTDF+ M      +++   N+ E  A+L+EF+ DYN+ HFVR  EF  +A  M    +++FVEFLE+SCT+EFSGFLLYKEL RR+K  NP++AE F LM+RDEARHAGFLNK +SDF+  LDLGF+T  +KYT+
Sbjct:   18 KAPAKETILTPRFYTTDFEAM-----AKMDLSPNEDELRAILEEFRADYNRKHFVRTPEFDGSAADMDPETKKVFVEFLEQSCTSEFSGFLLYKELSRRIKNRNPLLAECFELMARDEARHAGFLNKSMSDFDLQLDLGFLTANKKYTY 161
[Close]
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_SYNE7 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus elongatus (strain PCC 7942) GN=acsF PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.143e-44
Identity = 86/149 (57.72%), Postives = 111/149 (74.50%), Query Frame = 3 
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K   KET+LTPRFYTTDF+ M      +++   N+ E  A+L+EF+ DYN+ HFVR  EF  +A  M    +++FVEFLE+SCT+EFSGFLLYKEL RR+K  NP++AE F LM+RDEARHAGFLNK +SDF+  LDLGF+T  +KYT+
Sbjct:   18 KAPAKETILTPRFYTTDFEAM-----AKMDLSPNEDELRAILEEFRADYNRKHFVRTPEFDGSAADMDPETKKVFVEFLEQSCTSEFSGFLLYKELSRRIKNRNPLLAECFELMARDEARHAGFLNKSMSDFDLQLDLGFLTANKKYTY 161
[Close]
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF2_SYNY3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2 OS=Synechocystis sp. (strain PCC 6803) GN=acsF2 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.037e-43
Identity = 85/149 (57.05%), Postives = 109/149 (73.15%), Query Frame = 3 
Query:  222 KTAIKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668
            K  +KETLLTPRFYTTDFD++  L  T     L   E EA L+E + DYN+ HFVRN +FK + D + G  R  F++FLERSCT+EFSGFLL+KEL RRLK  +P +AE F L++RDEARHAGF+NK ++DF  +LDL ++T+ R YTF
Sbjct:   18 KAPVKETLLTPRFYTTDFDKVANLVLT-----LQDEEIEAALEELRADYNRYHFVRNDDFKRSFDHIDGATRLAFIDFLERSCTSEFSGFLLFKELSRRLKNRSPKLAEAFHLLARDEARHAGFINKAMADFGLSLDLRYLTQKRTYTF 161
The following BLAST results are available for this feature:
BLAST of FC868539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ACSF_PROMP8.270e-4557.05Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROM58.270e-4557.05Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROM91.080e-4457.72Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROM21.080e-4457.05Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROM01.080e-4457.05Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PROMS1.842e-4457.05Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF2_ANASP2.406e-4456.38Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNP63.143e-4457.72Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNE73.143e-4457.72Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF2_SYNY32.037e-4357.05Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]

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Properties
Property NameValue
Genbank descriptionC31001F08EF AbioticL1 Citrus clementina cDNA clone C31001F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868539 ID=FC868539; Name=FC868539; organism=Citrus clementina; type=EST; length=676bp
ACTCTCTAGTTCCTCCCCTGGTTCCAGAAATGGCAGCTGAGATGGCACTG
GTCAAACCGATTAGCAAATTCAGCACCATCGCCACCACTACTAAGCCTAG
GTTCAGCTACCCGAAAGCAACATGTACATCTCTGAGCACAAGATTTTGTA
CAATCAAAATGTCAGCAACTTCAGAGCAAGCGGCTGCTGCCACTGCCCAA
AAGCCAAGCAAGAAATCAAACAAAACTGCTATCAAGGAGACCCTTCTGAC
ACCAAGGTTTTATACAACAGATTTTGATGAAATGGAGACCCTTTTCAACA
CTGAGATCAACAAGAAGCTCAACCAGGCTGAATTTGAGGCATTGCTTCAA
GAATTCAAGACTGATTATAACCAGACTCACTTTGTGAGGAACAAGGAGTT
CAAGGAAGCTGCTGACAAGATGCAAGGCCCTCTCAGGCAGATCTTTGTTG
AGTTCTTGGAGAGGTCTTGCACTGCTGAGTTCTCTGGTTTCCTTCTTTAC
AAAGAGCTCGGAAGGAGACTCAAGAAAACCAACCCAGTGGTAGCTGAGAT
TTTCTCTCTGATGTCCAGGGATGAAGCCAGGCATGCCGGGTTTCTGAACA
AGGGGCTATCTGATTTCAATTATGCATTGGACTTGGGCTTCGTGACNAAA
GCTAGGAAATACACATTTGTCAGCCA
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