FC868539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_PROM4 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9211) GN=acsF PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.838e-22 Identity = 55/147 (37.41%), Postives = 85/147 (57.82%), Query Frame = 3 Query: 231 IKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668 + E LLTPRFYTT+FD+ + + ++ + +F+A+ E + DYN HF R +++ + ++ +L RS +EFSGFLL+KE+ R KK P + + F ++RDEARHAGFL + L + +DL + K R TF Sbjct: 23 LDENLLTPRFYTTEFDKA-----AKTDLEIARRDFQAMFNEMEADYNLKHFDRKASLARL-NELSPKDKSVYESYLVRSVVSEFSGFLLFKEISNRFKKAKRPELGQFFQFLARDEARHAGFLGRALKEEGINIDLPNLPKKRAATF 163
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_PROMA (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus GN=acsF PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.285e-21 Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = 3 Query: 231 IKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668 + E LLTPRFYTT+F++ + EI +K +FEA+ +E + DYN HF R K E D++ + ++ +L RS +EFSGFLL+KE+ R KK + + F+ ++RDEARHAGFL + L +DL + K R TF Sbjct: 21 LDENLLTPRFYTTEFEKAAKT-DLEIARK----DFEAMFKEMEADYNLKHFDR-KASLERLDELSPEDKAVYESYLVRSVVSEFSGFLLFKEISNRFKKAGRQELGQFFTFLARDEARHAGFLGRALKTEGINVDLPNLPKKRAATF 161
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_PROM3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9303) GN=acsF PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.421e-20 Identity = 57/147 (38.78%), Postives = 86/147 (58.50%), Query Frame = 3 Query: 231 IKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668 + + LLTPRFYTT+FD+ T+++ + + +FEA+ +E + DYN HF R + AD + + I+ +L RS +EFSGFLL+KE+ R KK + + F+ ++RDEARHAGFL + L +DL + R TF Sbjct: 23 LDDNLLTPRFYTTEFDKAA---KTDLD--IARKDFEAMFKEMEADYNLKHFDRKASLERLAD-LSPEDKAIYESYLVRSVVSEFSGFLLFKEISNRFKKAGRQELGQFFTFLARDEARHAGFLGRALKAEGINVDLPNLGNKRAPTF 163
BLAST of FC868539 vs. ExPASy Swiss-Prot
Match: ACSF_PROMM (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Prochlorococcus marinus (strain MIT 9313) GN=acsF PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.133e-20 Identity = 57/147 (38.78%), Postives = 86/147 (58.50%), Query Frame = 3 Query: 231 IKETLLTPRFYTTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFVTKARKYTF 668 + + LLTPRFYTT+FD+ T+++ + + +FEA+ +E + DYN HF R K E ++ + I+ +L RS +EFSGFLL+KE+ R KK + + F+ ++RDEARHAGFL + L +DL + R TF Sbjct: 23 LDDNLLTPRFYTTEFDKAA---KTDLD--IARKDFEAMFKEMEADYNLKHFDR-KASLERLSELSPEDKAIYESYLVRSVVSEFSGFLLFKEISNRFKKAGRQELGQFFTFLARDEARHAGFLGRALKAEGINVDLPNLGNKRAATF 163 The following BLAST results are available for this feature:
BLAST of FC868539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868539 ID=FC868539; Name=FC868539; organism=Citrus clementina; type=EST; length=676bpback to top |