FC868542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.036e-18 Identity = 60/149 (40.27%), Postives = 80/149 (53.69%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEV 448 G E +TL QLL EMDGF+ + VIAATNR DILD ALLRPGRFDR + V +PD +GR EILKVH + K V L VIA T G SG R + ++ + ++D+++ ++ + +A HEV Sbjct: 254 GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVH-TRKMNLKGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVIG-------SEKRLAQQIAMHEV 394
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.036e-18 Identity = 48/92 (52.17%), Postives = 60/92 (65.22%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G+ E ++TL QLL EMDGF+ + +I ATNR DILD A+LRPGRFDR + V PD +GR EILK+H DV+L+ IA T G G Sbjct: 286 GDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVG 377
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18 Identity = 43/87 (49.43%), Postives = 61/87 (70.11%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 ++ +NQLLTE+DG E ++VIAATNR DI+D ALLRPGR DR + V VPD + R +I K+H + DV+L+ +A +T G++G Sbjct: 571 DKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTG 657 HSP 2 Score: 87.4261 bits (215), Expect = 7.427e-17 Identity = 44/82 (53.66%), Postives = 54/82 (65.85%), Query Frame = 2 Query: 32 QLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 QLLT MDG +G ++VI ATNR + LD AL RPGRFDR++ + VPD GR EIL++H N DV LD +A T GF G Sbjct: 302 QLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVG 383
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18 Identity = 50/125 (40.00%), Postives = 67/125 (53.60%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDR 376 G+ E +TL QLL EMDGF + +I ATNR DILD ALLRPGRFDR + + PDI GR IL +H + D V + IA RT G +G R ++ ++ + SI++ Sbjct: 269 GDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSIEK 393
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18 Identity = 49/123 (39.84%), Postives = 68/123 (55.28%), Query Frame = 2 Query: 11 EREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRI 379 E ++TL QLL EMDGF+ I +IAATNR D+LD A+LRPGRFDR V V +P I R +ILK+H D+ +A T G SG RR K + +E ++++++ Sbjct: 278 EVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKV 400
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18 Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = 2 Query: 11 EREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDG 415 E ++TL QLL EMDGF+ I +IAATNR D+LD A+LRPGRFDR V V +P I R +ILK+H D+ +A T G SG R+ KA + ++ ++++++ + M G Sbjct: 278 EVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKVSMAADTQKMMPG 412
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.143e-18 Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 E+ +NQLL EMDG +++IAATNR DILD ALLRPGRFDR + V PD R EILKVH N DVSL+ IA + G++G Sbjct: 606 ERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTG 692 HSP 2 Score: 87.4261 bits (215), Expect = 7.427e-17 Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 ++ + QLLT MDG +G +IVI ATNR D +D AL RPGRFDR++ + PD +GR +IL+VH N DV LD +A T G++G Sbjct: 330 KRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTG 416
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17 Identity = 41/131 (31.30%), Postives = 75/131 (57.25%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME 394 G++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V +PD+ GRT+I K+H + D+ +++A P +G R + ++ K+ D++++++ G + Sbjct: 284 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 414
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17 Identity = 41/131 (31.30%), Postives = 75/131 (57.25%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME 394 G++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V +PD+ GRT+I K+H + D+ +++A P +G R + ++ K+ D++++++ G + Sbjct: 284 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 414
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.955e-17 Identity = 45/87 (51.72%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 E+ +NQLLT +DG E G++VI ATNR DI+D ALLR GRFD+ + + PD R ILKVH N DV L+ IA RT G+ G Sbjct: 586 ERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVG 672 HSP 2 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 44/97 (45.36%), Postives = 58/97 (59.79%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSN-----KKFDADVSLDVIAMRTPGFSG 277 G ER + + QLLT MDG + +IVI ATNR D +D AL RPGRFDR++ + VPD GR EIL +H N + + + L+ +A T GF G Sbjct: 304 GEVER-RVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVG 399 The following BLAST results are available for this feature:
BLAST of FC868542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868542 ID=FC868542; Name=FC868542; organism=Citrus clementina; type=EST; length=681bpback to top |