FC868542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.553e-17 Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIV 382 G+ E ++TL QLL EMDGF+ + ++AATNR DILD ALLRPGRFDR + V +P R +ILK+H DV L IA+ T SG R + + S + + ++ +++ Sbjct: 275 GDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSSDFNAAVAKVM 401
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.553e-17 Identity = 54/149 (36.24%), Postives = 79/149 (53.02%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEV 448 G E +TL QLL EMDGF+ + + +IAATNR DILD ALLRPGRFDR + V +P+ + R EILK+H V L +IA T G SG R + ++ ++ +I++++ ++ + +A HEV Sbjct: 255 GEREVNRTLMQLLAEMDGFDPSGNVKIIAATNRPDILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHTKRMNLKG-VDLRIIAEMTEGASGADLKAITMEAGMFAIRDRREYVTQEDFLKAIEKVLG-------SEQRLSQQIAMHEV 395
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 47/92 (51.09%), Postives = 58/92 (63.04%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G+ E ++TL QLL MDGFE + +I ATNR DILD+ALLRPGRFDR + + +PD GR ILKVH DV L +A T G +G Sbjct: 269 GDREVQRTLMQLLAAMDGFEPRGDVKIIGATNRIDILDAALLRPGRFDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVARLTEGRNG 360
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 51/126 (40.48%), Postives = 70/126 (55.56%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRI 379 G+ E ++TL QLL MDGFE + +I ATNR DILD ALLRPGRFDR + + +PD GR ILKVH + V+L IA T G +G R + AI+ ++ +I+++ Sbjct: 294 GDREVQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIRNERPAITREDFLSAIEKV 419
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17 Identity = 43/129 (33.33%), Postives = 73/129 (56.59%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAG 388 G++E ++T+ +L+T++DGF+ I V+ ATNR + LD AL+RPGR DR+V +PD+ GR IL++H + D D+ ++IA P +G R + + K+ D++ ++V G Sbjct: 295 GDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKG 423
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17 Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVA 385 G+ E ++T+ +LL ++DGF + + +IAATNR DILD ALLR GR DR++ +P+ GR IL++H DV+ D +A T GF+G R+ K IS + D I +++ Sbjct: 264 GDREVQRTMLELLNQLDGFSSSEEVKIIAATNRVDILDPALLRSGRLDRKIEFPLPNTLGRKRILQIHARKMSVRDDVNFDELARSTEGFNGAQCKAVCVEAGMAALRKEKTEISQNDFMDGIQEVLS 391
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.687e-17 Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 E+ ++QLLTE+DG E ++VIAATNR D++D ALLRPGR +R + + PD + R EI K+H K DV+++ +A +T G+SG Sbjct: 574 ERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSG 660 HSP 2 Score: 84.7297 bits (208), Expect = 4.814e-16 Identity = 46/92 (50.00%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G ER + + QLL MDG E +IVIAATNR D +D AL RPGRFDR++ + VPD GR EIL++H DV L+ +A T GF G Sbjct: 296 GEVER-RVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVG 386
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.687e-17 Identity = 47/127 (37.01%), Postives = 69/127 (54.33%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIV 382 G+ E ++T+ QLL E+DGF+ + VI ATNR DILD A+LRPGRFDR + V +P GR +I K+H K DV +A T G SG R +A ++ + +I++++ Sbjct: 257 GDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVL 383
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.687e-17 Identity = 40/131 (30.53%), Postives = 74/131 (56.49%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME 394 G++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V +PD+ RT+I K+H + D+ +++A P +G R + ++ K+ D++++++ G + Sbjct: 283 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 413
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.687e-17 Identity = 43/129 (33.33%), Postives = 72/129 (55.81%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAG 388 G++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR+V +PD+ GR ILK+H + D+ D++A P +G R + + K+ ++I+++V G Sbjct: 293 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVKG 421 The following BLAST results are available for this feature:
BLAST of FC868542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868542 ID=FC868542; Name=FC868542; organism=Citrus clementina; type=EST; length=681bpback to top |