FC868542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PEX1_PICPA (Peroxisome biosynthesis protein PAS1 OS=Pichia pastoris GN=PEX1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.072e-15 Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 ++ +NQ+LT+MDG EG G+ V+AAT+R D++DSALLRPGR D+ V D+PD R +IL+ N V+L +A GFSG Sbjct: 917 DRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSG 1003
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.401e-15 Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G ++ +NQ+LTEMDG + +I ATNR DI+D A+LRPGR D+ + + +PD + R ILK + DV LD +A T GFSG Sbjct: 593 GGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSG 684 HSP 2 Score: 81.6481 bits (200), Expect = 4.075e-15 Identity = 44/92 (47.83%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G ER + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+V + +PD GR EIL++H N K DV L+ +A T G G Sbjct: 318 GEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVG 408
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.829e-15 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 ++ ++QLLT MDG + ++VIAATNR + +D AL R GRFDR++ + +PD GR EIL++H N K DV L+ +A GF G Sbjct: 327 KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVG 413 HSP 2 Score: 79.7221 bits (195), Expect = 1.549e-14 Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 ++ +NQ+LTEMDG + +I ATNR DI+D A+LRPGR D+ + + +PD R +I K AD+ L+ +A T GFSG Sbjct: 603 DRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSG 689
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.829e-15 Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVH 205 G+ E ++TL QLL EMDGF+ + +IAATNR DILD A+LRPGRFDR + + +PD GR +ILK+H Sbjct: 264 GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIH 331
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.829e-15 Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVH 205 G+ E ++TL QLL EMDGF+ + +IAATNR DILD A+LRPGRFDR + + +PD GR +ILK+H Sbjct: 264 GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIH 331
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.829e-15 Identity = 49/147 (33.33%), Postives = 72/147 (48.98%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYH 442 G+ E ++T+ +LL ++DGF + I VIAATNR DILD ALLR GR DR++ +P+ R IL++H ADV+ D +A + F+G RRG + + +EG V K K + Y+ Sbjct: 284 GDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELIHNDF----------VEGCVEVMAKKKKTLEYY 420
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.389e-15 Identity = 39/129 (30.23%), Postives = 72/129 (55.81%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAG 388 G++E ++T+ +L+T++DGF+ I V+ ATNR + LD ALLRPGR DR+V +PD+ GR I ++H + + + ++I+ P +G R + + K+ ++D++++G Sbjct: 325 GDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVISG 453
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PR6AB_XENLA (26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-B PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.389e-15 Identity = 47/147 (31.97%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYH 442 G+ E ++T+ +LL ++DGF+ T + VIAATNR DILD ALLR GR DR++ +P+ R I+++H DV+ + +A T F+G RRG ++ ++ MEG + K K+ + Y+ Sbjct: 267 GDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDY----------MEGILEVQAKKKANLQYY 403
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: NSF_CAEEL (Vesicle-fusing ATPase OS=Caenorhabditis elegans GN=nsf-1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.389e-15 Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSN----KKFDADVSLDVIAMRTPGFSG 277 + +NQLL++MDG E I+VI TNR D++D ALLRPGR + Q+ V +PD GR +ILK+H + K D +V L+ I+ RT FSG Sbjct: 425 DTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSG 515
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: CD48B_ARATH (Cell division control protein 48 homolog B OS=Arabidopsis thaliana GN=CDC48B PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.389e-15 Identity = 45/87 (51.72%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 E+ L+ LLTEMDG E GI+V+AATNR +D+AL+RPGRFD + V PD+ R EIL+VH N DV L IA T F+G Sbjct: 408 ERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTG 494 The following BLAST results are available for this feature:
BLAST of FC868542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868542 ID=FC868542; Name=FC868542; organism=Citrus clementina; type=EST; length=681bpback to top |