FC868542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 4.075e-15 Identity = 44/92 (47.83%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G ER + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+V + +PD GR EIL++H N K DV L+ +A T G G Sbjct: 318 GEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVG 408 HSP 2 Score: 81.2629 bits (199), Expect = 5.323e-15 Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G ++ +NQ+LTEMDG + +I ATNR DI+D A+LRPGR D+ + + +PD + R ILK + DV +D +A T GFSG Sbjct: 593 GGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSG 684
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: YB7A_SCHPO (Uncharacterized AAA domain-containing protein C16E9.10c OS=Schizosaccharomyces pombe GN=SPBC16E9.10c PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.323e-15 Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 5 NDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAM--RTPGFSG 277 ++ + +N LLTE+DG +G+ VIAATNR DI+D A+LRPGR D+ + VD+PD R EILK +V+LDV+ R FSG Sbjct: 606 SEASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSG 698
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4) HSP 1 Score: 81.2629 bits (199), Expect = 5.323e-15 Identity = 42/139 (30.22%), Postives = 74/139 (53.24%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGK 418 G+ E ++T+ +LL ++DGFE + I +I ATNR DILD ALLRPGR DR++ P + R EIL++H ++L +A + G SG R + ++ ++ + ++ +++ + T ++ K Sbjct: 264 GDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKVMNKNQETAISVAK 402
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.323e-15 Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G+ E ++T+ +LL ++DGFE I VI ATNR DILD ALLRPGR DR++ P R EIL++H + + L IA + G SG Sbjct: 262 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASG 353
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.323e-15 Identity = 47/147 (31.97%), Postives = 73/147 (49.66%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYH 442 G+ E ++T+ +LL ++DGF + I VIAATNRADILD AL+R GR DR++ P R IL++H + DV+ + +A T F+G RR ++ ++ + EG + K KS + Y+ Sbjct: 292 GDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFN----------EGIIQVQAKKKSSLNYY 428
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: NSF_ARATH (Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=NSF PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.323e-15 Identity = 40/96 (41.67%), Postives = 59/96 (61.46%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKK----FDADVSLDVIAMRTPGFSG 277 G + +NQLLT++DG E +++I TNR D+LD ALLRPGR + QV + +PD GR +IL++H + K D++L +A RT +SG Sbjct: 340 GTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYSG 435
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G ER + ++QLLT MDG + ++ +IV+AATNR + +D AL R GRFDR++ + +PD GR E+L++H N K DV L+ IA + G G Sbjct: 315 GEVER-RIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVG 405 HSP 2 Score: 78.5666 bits (192), Expect = 3.450e-14 Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 ++ +NQ+LTEMDG + +I ATNR DI+D A+LRPGR D+ + + +PD + R ILK + +V L IA T GFSG Sbjct: 595 DRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSG 681
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 44/128 (34.38%), Postives = 70/128 (54.69%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVA 385 G+ E ++T+ +LL ++DGF + I VIAATNRADILD AL+R GR DR++ P R IL++H +ADV+ + +A T F+G RR ++ ++ ++ I ++ A Sbjct: 286 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 413
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 41/92 (44.57%), Postives = 52/92 (56.52%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G ++ LNQLLTEMDG + +I ATNR DI+DSALLRPGR D+ + + +PD R I K DV + +A T GFSG Sbjct: 597 GGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSG 688 HSP 2 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 5 NDEREQTL-NQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 N E E+ + +QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD GR E+L++H N K DV L+ I+ T G+ G Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVG 411
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.549e-14 Identity = 43/128 (33.59%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVA 385 G+ E ++T+ +LL ++DGF + I VIAATNRADILD AL+R GR DR++ P R IL++H + DV+ + +A T F+G RR ++ ++ ++ I ++ A Sbjct: 286 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQA 413 The following BLAST results are available for this feature:
BLAST of FC868542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868542 ID=FC868542; Name=FC868542; organism=Citrus clementina; type=EST; length=681bpback to top |