FC868542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVA 385 G+ E ++T+ +LL ++DGF + + V+AATNR D+LD ALLR GR DR++ +P R +IL++H D D++ +A T F+G R G++++ ++ + I + A Sbjct: 297 GDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQA 424
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G E ++T+ +LL ++DGF+ + VI ATNR + LD ALLRPGR DR++ +PDI+ R I ++H S DV+L+ M FSG Sbjct: 304 GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSG 395
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: CDC48_CAPAN (Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 39/87 (44.83%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 ++ LNQLLTEMDG + +I ATNR DI+D ALLRPGR D+ + + +PD R +I K D+ L +A T GFSG Sbjct: 602 DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSG 688 HSP 2 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G ER + ++QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD GR E+L +H N K +V L+ I+ T G+ G Sbjct: 322 GEVER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLGIHTKNMKLAEEVDLERISKDTHGYVG 412
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 5 NDEREQTL-NQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 N E E+ + +QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD GR E+L++H N K DV L+ I+ T G+ G Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVG 411 HSP 2 Score: 78.5666 bits (192), Expect = 3.450e-14 Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 ++ LNQLLTEMDG + +I ATNR DI+DSALLRPGR D+ + + +PD R I K DV + +A T GFSG Sbjct: 601 DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSG 687
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: SEC18_SCHPO (Vesicular-fusion protein sec18 OS=Schizosaccharomyces pombe GN=sec18 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVH----GSNKKFDADVSLDVIAMRTPGFSG 277 +Q +NQLL +MDG + I+VI TNR D++D ALLRPGR + + + +PD GR +ILK+H SN + DV ++ +A T FSG Sbjct: 399 DQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSG 489
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVA 385 G+ E ++T+ +LL ++DGF + I VIAATNRADILD AL+R GR DR++ P R IL++H DV+ + +A T F+G RR ++ ++ ++ I ++ A Sbjct: 287 GDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 414
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 41/127 (32.28%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIV 382 G+ E ++T+ +LL ++DGFE I V+ TNR DILD ALLRPGR DR++ P GR +ILK+H ++L I+ + G SG R + +S ++ + ++ +++ Sbjct: 262 GDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSKVM 388
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVA 385 G+ E ++T+ +LL ++DGF + I VIAATNRADILD AL+R GR DR++ P R IL++H DV+ + +A T F+G RR ++ ++ ++ I ++ A Sbjct: 287 GDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 414
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G ER + ++QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD GR E+L++H N K DV L+ ++ T G+ G Sbjct: 322 GEVER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVG 412 HSP 2 Score: 77.7962 bits (190), Expect = 5.885e-14 Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 ++ LNQLLTEMDG + +I ATNR DI+D ALLRPGR D+ + + +PD R +I K DV L +A T GFSG Sbjct: 602 DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSG 688
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.450e-14 Identity = 41/92 (44.57%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G+ E ++T+ QLL+EMDGF+ I +IAATNR D+LD A+LRPGRFDR + V P++ GR +I ++H V +A T SG Sbjct: 265 GDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSG 356 The following BLAST results are available for this feature:
BLAST of FC868542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868542 ID=FC868542; Name=FC868542; organism=Citrus clementina; type=EST; length=681bpback to top |