FC868542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: NVL_DICDI (Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum GN=nvl PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14 Identity = 43/94 (45.74%), Postives = 55/94 (58.51%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIA--MRTPGFSG 277 GN E+ +NQLLTEMDG E + + +IAATNR DI+D+A+ RPGR D+ V V +P R EILK DV L + +R FSG Sbjct: 682 GNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSG 775
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PEX1_YEAST (Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae GN=PEX1 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 42/96 (43.75%), Postives = 61/96 (63.54%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKV-------HGSNKKF--DADVSLDVIAMRTPGFSG 277 ++ +NQLLT+MDG EG G+ ++AAT+R D++DSALLRPGR D+ V ++P R +IL+ KKF + + L +IA +T GFSG Sbjct: 815 DRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSG 910
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: SEC18_CANAL (Vesicular-fusion protein SEC18 OS=Candida albicans GN=SEC18 PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVH----GSNKKFDADVSLDVIAMRTPGFSG 277 G + +NQLL++MDG + I+VI TNR D++D+ALLRPGRF+ Q+ + +PD +GR +I +H N +DV+ D ++ T F+G Sbjct: 401 GTGVGDNVVNQLLSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLTKNFTG 496
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 11 EREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 E ++TL +LL ++DGF+ + +I ATNR D+LD ALLRPGR DR++ + +P+ + R EILK+H S ++ + I GF+G Sbjct: 258 EIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNG 346
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: NSF_PONAB (Vesicle-fusing ATPase OS=Pongo abelii GN=NSF PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKK----FDADVSLDVIAMRTPGFSG 277 + +NQLL+++DG E I+VI TNR D++D ALLRPGR + ++ + +PD +GR +IL +H + + ADV + +AM T FSG Sbjct: 348 DTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAMETKNFSG 438
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: TBP7_CAEEL (TAT-binding homolog 7 OS=Caenorhabditis elegans GN=lex-1 PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = 2 Query: 26 LNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADV--SLDVIAMRTPGFSG 277 ++ LL MDG +G ++VI ATNR D LD AL RPGRFDR++ +PD+ R +IL +H S + + + +LD IA RT G+ G Sbjct: 517 VSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCG 602
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 11 EREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 E ++TL +LL +MDGF+ + +I ATNR D LD ALLRPGR DR++ +D+P+ + R +ILK+H ++ + I + GF+G Sbjct: 252 EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 11 EREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 E ++TL +LL +MDGF+ + +I ATNR D LD ALLRPGR DR++ +D+P+ + R +ILK+H ++ + I + GF+G Sbjct: 252 EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 11 EREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 E ++TL +LL +MDGF+ + +I ATNR D LD ALLRPGR DR++ +D+P+ + R +ILK+H ++ + I + GF+G Sbjct: 252 EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 11 EREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 E ++TL +LL +MDGF+ + +I ATNR D LD ALLRPGR DR++ +D+P+ + R +ILK+H ++ + I + GF+G Sbjct: 252 EIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340 The following BLAST results are available for this feature:
BLAST of FC868542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868542 ID=FC868542; Name=FC868542; organism=Citrus clementina; type=EST; length=681bpback to top |