FC868542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: NSF_RAT (Vesicle-fusing ATPase OS=Rattus norvegicus GN=Nsf PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.921e-13 Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKK----FDADVSLDVIAMRTPGFSG 277 + +NQLL+++DG E I+VI TNR D++D ALLRPGR + ++ + +PD +GR +IL +H + + ADV + +A+ T FSG Sbjct: 348 DTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSG 438
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: NSF_MOUSE (Vesicle-fusing ATPase OS=Mus musculus GN=Nsf PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.921e-13 Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKK----FDADVSLDVIAMRTPGFSG 277 + +NQLL+++DG E I+VI TNR D++D ALLRPGR + ++ + +PD +GR +IL +H + + ADV + +A+ T FSG Sbjct: 348 DTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSG 438
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: NSF_HUMAN (Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.921e-13 Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKK----FDADVSLDVIAMRTPGFSG 277 + +NQLL+++DG E I+VI TNR D++D ALLRPGR + ++ + +PD +GR +IL +H + + ADV + +A+ T FSG Sbjct: 348 DTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSG 438
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: NSF_CRIGR (Vesicle-fusing ATPase OS=Cricetulus griseus GN=NSF PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.921e-13 Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKK----FDADVSLDVIAMRTPGFSG 277 + +NQLL+++DG E I+VI TNR D++D ALLRPGR + ++ + +PD +GR +IL +H + + ADV + +A+ T FSG Sbjct: 348 DTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSG 438
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: SPA5L_HUMAN (Spermatogenesis-associated protein 5-like protein 1 OS=Homo sapiens GN=SPATA5L1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 2 Query: 32 QLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 Q+LT +DG G+ ++V+ ATNR D LD AL RPGRFDR+V + P ++ R EIL+V S + V L ++A T G+ G Sbjct: 324 QVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPISSHVDLGLLAEMTVGYVG 405 HSP 2 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDG-----------------FEG--NTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G D +E+ L+ LL E+DG F+ N +++IAATNR D+LD+ALLRPGR D+ + + PD +GR ILKV DVSL+ +A T FSG Sbjct: 579 GCDVQERVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLAAETCFFSG 689
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PR6AA_XENLA (26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-A PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 38/91 (41.76%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFS 274 G+ E ++T+ +LL ++DGF+ N + VIAATNR DILD ALLR GR DR++ +P+ R I+++H DV+ + +A R P S Sbjct: 286 GDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELA-RCPTIS 375
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 36/92 (39.13%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G E ++T+ +LL ++DGF+ + VI ATNR + LD AL+RPGR DR++ +PD + + I ++H S DV+LD + M SG Sbjct: 301 GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSG 392
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: NSF2_DROME (Vesicle-fusing ATPase 2 OS=Drosophila melanogaster GN=Nsf2 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 17 EQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSN----KKFDADVSLDVIAMRTPGFSG 277 + +NQLL ++DG E I+VI TNR D++D ALLRPGR + Q+ + +P+ +GR +IL +H K +DV + IA +T FSG Sbjct: 353 DTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSG 443
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: SPA5L_BOVIN (Spermatogenesis-associated protein 5-like protein 1 OS=Bos taurus GN=SPATA5L1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.110e-12 Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = 2 Query: 65 NTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 N+ +IV+AATNR D+LD ALLRPGR D+ + + PD +GR ILKV N DVSL+ +A T FSG Sbjct: 633 NSNVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVAAETCFFSG 703 HSP 2 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 2 Query: 32 QLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 Q+LT +DG + ++V+ +TNR D LD AL RPGRFDR+V + P +R R IL+V S V L+++A T G+ G Sbjct: 326 QVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKMPISGQVDLNLLAEMTVGYVG 407
BLAST of FC868542 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.110e-12 Identity = 36/92 (39.13%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 2 GNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 277 G E ++T+ +LL ++DGF+ + VI ATNR + LD AL+RPGR DR++ +PD + + I ++H S DV+LD + M SG Sbjct: 301 GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSG 392 The following BLAST results are available for this feature:
BLAST of FC868542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868542 ID=FC868542; Name=FC868542; organism=Citrus clementina; type=EST; length=681bpback to top |