FC868543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_SPISO (Ribonucleoside-diphosphate reductase small chain OS=Spisula solidissima PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 7.961e-41 Identity = 77/110 (70.00%), Postives = 91/110 (82.73%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 P+L + +RF + PI+Y +W+MYKKA+ASFWTAEEVDLS+D+ HWE L EKHFISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL+ Sbjct: 63 PLLADNPRRFVVLPIQYHDIWKMYKKAEASFWTAEEVDLSKDMAHWESLKKEEKHFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLI 172
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_DROME (Ribonucleoside-diphosphate reductase subunit M2 OS=Drosophila melanogaster GN=RnrS PE=1 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.040e-40 Identity = 76/110 (69.09%), Postives = 91/110 (82.73%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 P+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ W RL D E+HFISHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMEN+HSEMYS+L+ Sbjct: 75 PLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLI 184
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2B_MOUSE (Ribonucleoside-diphosphate reductase subunit M2 B OS=Mus musculus GN=Rrm2b PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.316e-40 Identity = 73/110 (66.36%), Postives = 92/110 (83.64%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 P+L + ++RF +FPI+Y +W MYK+AQASFWTAEEVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL+ Sbjct: 33 PLLRKSSRRFVIFPIQYPDIWRMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLI 142
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2B_PONAB (Ribonucleoside-diphosphate reductase subunit M2 B OS=Pongo abelii GN=RRM2B PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.025e-40 Identity = 73/110 (66.36%), Postives = 93/110 (84.55%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 P+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL+ Sbjct: 33 PLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLI 142
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2B_MACFA (Ribonucleoside-diphosphate reductase subunit M2 B OS=Macaca fascicularis GN=RRM2B PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.025e-40 Identity = 73/110 (66.36%), Postives = 93/110 (84.55%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 P+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL+ Sbjct: 33 PLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLI 142
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2B_HUMAN (Ribonucleoside-diphosphate reductase subunit M2 B OS=Homo sapiens GN=RRM2B PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.025e-40 Identity = 73/110 (66.36%), Postives = 93/110 (84.55%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 P+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL+ Sbjct: 33 PLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLI 142
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_NEUCR (Ribonucleoside-diphosphate reductase small chain OS=Neurospora crassa GN=rnr-2 PE=3 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 6.740e-40 Identity = 77/111 (69.37%), Postives = 91/111 (81.98%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 P+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D EK FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL+ Sbjct: 78 PLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDEKFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLI 188
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_DICDI (Ribonucleoside-diphosphate reductase small subunit OS=Dictyostelium discoideum GN=rnrB-1 PE=2 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 7.451e-39 Identity = 76/111 (68.47%), Postives = 89/111 (80.18%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 PIL E RF +FPI+Y +W MYKKA AS W AEE+DL D WE +L D+E+HFISHVLAFFAASDGIV ENLA RF++++QIPEAR FYGFQIA+ENIHSE YSLL+ Sbjct: 13 PILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYKLTDNERHFISHVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLI 123
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_SWPVK (Ribonucleoside-diphosphate reductase small chain OS=Swinepox virus (strain Kasza) GN=C14L PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.271e-38 Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 PIL E + RF +FPI+Y +W+MYK++ ASFWT EEVDLS+D+ W++L EK+FI H+LAFFA+SDGIV ENLA RF D+Q EAR FYGFQIAMENIHSEMYSLL+ Sbjct: 3 PILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDWDKLTKDEKYFIKHILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLI 112
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_VACCA (Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus (strain Ankara) GN=MVA032L PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.168e-38 Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 PIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI HVLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL+ Sbjct: 3 PILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLI 112 The following BLAST results are available for this feature:
BLAST of FC868543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868543 ID=FC868543; Name=FC868543; organism=Citrus clementina; type=EST; length=616bpback to top |