FC868543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_VARV (Ribonucleoside-diphosphate reductase small chain OS=Variola virus GN=F4L PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.832e-38 Identity = 73/110 (66.36%), Postives = 88/110 (80.00%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 PIL + RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI HVLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL+ Sbjct: 3 PILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKHVLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLI 112
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_VACCW (Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus (strain Western Reserve) GN=VACWR043 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.832e-38 Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 PIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI HVLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL+ Sbjct: 3 PILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLI 112
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_VACCC (Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus (strain Copenhagen) GN=F4L PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.832e-38 Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 PIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI HVLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL+ Sbjct: 3 PILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLI 112
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_TRYBB (Ribonucleoside-diphosphate reductase small chain OS=Trypanosoma brucei brucei GN=RNR2 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.698e-38 Identity = 69/110 (62.73%), Postives = 88/110 (80.00%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 P+L E R+ +FPI+Y +W+ YK+A++S WT EE+DL D+ WE+L D E+HFI HVLAFFAASDGIVLENLA RF+ ++Q+PE R FYGFQIAMENIHSE YS+L+ Sbjct: 18 PLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGERHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLI 127
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_PLAF4 (Ribonucleoside-diphosphate reductase small chain OS=Plasmodium falciparum (isolate Dd2) GN=RNR2 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 6.308e-38 Identity = 72/109 (66.06%), Postives = 93/109 (85.32%), Query Frame = 2 Query: 290 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 IL +++ RF ++PI Y VW+ YKKA+ASFWTAEE+DLS D++ +E+L ++EKHFI HVLAFFAASDGIVLENLA++FL ++QI EA+ FY FQIA+ENIHSE YSLL+ Sbjct: 33 ILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLI 141
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_YLDV (Ribonucleoside-diphosphate reductase small chain OS=Yaba-like disease virus GN=20L PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 8.239e-38 Identity = 74/110 (67.27%), Postives = 89/110 (80.91%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 PIL ++ +FPI Y+ +W+MYKKA ASFWT EEVDLS+D W +L D+EK+FI H+LAFFAASDGIV ENLA RF +++QI EAR FYGFQIAMENIHSEMYSLL+ Sbjct: 7 PILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLKLSDNEKNFIKHILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLI 116
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_VACCP (Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus (strain L-IVP) GN=F14 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.405e-37 Identity = 71/110 (64.55%), Postives = 87/110 (79.09%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 PIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W ++ EK+FI HVLAFFAASDGIV ENLA RF ++QI EAR FYGF++A+ENIHSEMYSLL+ Sbjct: 3 PILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKVTPDEKYFIKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFRMAIENIHSEMYSLLI 112
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_LEIAM (Ribonucleoside-diphosphate reductase small subunit OS=Leishmania amazonensis PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.930e-35 Identity = 64/110 (58.18%), Postives = 84/110 (76.36%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 P+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D E+HFI HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL Sbjct: 26 PLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLL 135
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_YEAST (Ribonucleoside-diphosphate reductase small chain 1 OS=Saccharomyces cerevisiae GN=RNR2 PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 6.528e-35 Identity = 67/111 (60.36%), Postives = 89/111 (80.18%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 P+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL+ Sbjct: 77 PLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLI 187
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_CAEEL (Ribonucleoside-diphosphate reductase small chain OS=Caenorhabditis elegans GN=rnr-2 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.528e-35 Identity = 66/110 (60.00%), Postives = 86/110 (78.18%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 P+L + + RF +FP+++ +W YKKA ASFWT EEVDL +D+ WE++ E++FIS +LAFFAASDGIV ENL RF N++Q+ EAR FYGFQIA+ENIHSEMYS L+ Sbjct: 63 PMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFISRILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLI 172 The following BLAST results are available for this feature:
BLAST of FC868543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868543 ID=FC868543; Name=FC868543; organism=Citrus clementina; type=EST; length=616bpback to top |