FC868543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_PLAFG (Ribonucleoside-diphosphate reductase small subunit OS=Plasmodium falciparum (isolate FCR-3 / Gambia) GN=RNR2 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.526e-35 Identity = 69/109 (63.30%), Postives = 88/109 (80.73%), Query Frame = 2 Query: 290 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 IL +++ RF ++PI Y V+ YKKA+A FWTAEE+D S D++ +E+L ++EKHFI HVLAFFAASDGIVLENLA FL ++QI EA+ FY FQIA+ENIHSE YSLL+ Sbjct: 4 ILNKESDRFTLYPILYPDVFPFYKKAEACFWTAEEIDYSSDLKDFEKLNENEKHFIKHVLAFFAASDGIVLENLAVSFLREVQITEAKKFYSFQIAVENIHSETYSLLI 112
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_SCHPO (Ribonucleoside-diphosphate reductase small chain OS=Schizosaccharomyces pombe GN=suc22 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 5.526e-34 Identity = 68/110 (61.82%), Postives = 88/110 (80.00%), Query Frame = 2 Query: 290 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDS-EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 +L RF +FPI+Y ++W+ YKKA+ASFWTAEE+DLS+D+ W+ L++ E++FIS VLA+FAASDGIV ENL RF +++QIPEAR YGFQI +ENIHSE YSLLL Sbjct: 68 VLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLNADERYFISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLL 177
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_ENCCU (Ribonucleoside-diphosphate reductase small chain OS=Encephalitozoon cuniculi GN=ECU06_0730 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.678e-33 Identity = 64/109 (58.72%), Postives = 85/109 (77.98%), Query Frame = 2 Query: 290 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 +L + +RF + PI+Y +W+MYKKA++SFWT EEV L +D+ W +L E+HFIS+VLAFFAASDGIV NL RF ++++ EAR FYGFQ+A+ENIHSEMYSLL+ Sbjct: 10 LLDPKEERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNAKERHFISYVLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLI 118
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_RSIV (Ribonucleoside-diphosphate reductase small chain OS=Red sea bream iridovirus GN=RR-2 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.531e-28 Identity = 58/93 (62.37%), Postives = 76/93 (81.72%), Query Frame = 2 Query: 344 VWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDI-QIPEARAFYGFQIAMENIHSEMYSLLL 616 +W MYKKA ASFWT EEVDLS DV+HW ++L ++E+ F+SH+LAFFA +DGIV +NL F ++ IPEARAFYGFQ+A+ENIH+EMY+ L+ Sbjct: 13 LWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAMADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLI 105
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR4_YEAST (Ribonucleoside-diphosphate reductase small chain 2 OS=Saccharomyces cerevisiae GN=RNR4 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.836e-27 Identity = 52/109 (47.71%), Postives = 82/109 (75.23%), Query Frame = 2 Query: 290 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 +LME ++RF MFPI+Y ++W YKK +ASFWTAEE++L++D + +++L D +K +I ++LA +SD +V + L F +Q PE ++FYGFQI MENI+SE+YS+++ Sbjct: 27 LLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMV 135
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_MIMIV (Ribonucleoside-diphosphate reductase small chain OS=Acanthamoeba polyphaga mimivirus GN=RNR2 PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.458e-26 Identity = 55/111 (49.55%), Postives = 79/111 (71.17%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER-LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 616 PIL +++++ + PI+Y++VW+ YK ++WT EEVDL++DV W L D +++FI HVLAFFAA+DGIV N+ ++ ++I EA YGFQ AMEN H EMYSL+L Sbjct: 100 PILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRNFIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLML 210
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_ASFM2 (Ribonucleoside-diphosphate reductase small chain OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=Mal-052 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.486e-23 Identity = 45/107 (42.06%), Postives = 70/107 (65.42%), Query Frame = 2 Query: 290 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 610 +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F +LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ Sbjct: 4 LLIENSQRFTIFPIQHPECWNWYKKLESMTWTAQEVDMCKDIDDWEAMPKPQREFYKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSI 110
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_ASFWA (Ribonucleoside-diphosphate reductase small chain OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=War-054 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.777e-23 Identity = 45/107 (42.06%), Postives = 70/107 (65.42%), Query Frame = 2 Query: 290 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 610 +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F +LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ Sbjct: 4 LLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSI 110
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_ASFP4 (Ribonucleoside-diphosphate reductase small chain OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=Pret-056 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.777e-23 Identity = 45/107 (42.06%), Postives = 70/107 (65.42%), Query Frame = 2 Query: 290 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 610 +L+E + RF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + S++ F +LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ Sbjct: 4 LLIENSHRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKSQREFYKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSI 110
BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_ASFK5 (Ribonucleoside-diphosphate reductase small chain OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=Ken-056 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.777e-23 Identity = 45/107 (42.06%), Postives = 70/107 (65.42%), Query Frame = 2 Query: 290 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 610 +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F +LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ Sbjct: 4 LLIEDSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSI 110 The following BLAST results are available for this feature:
BLAST of FC868543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868543 ID=FC868543; Name=FC868543; organism=Citrus clementina; type=EST; length=616bpback to top |