FC868543

Overview
NameFC868543
Unique NameFC868543
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC868543 vs. ExPASy Swiss-Prot
Match: RIR2_ASFB7 (Ribonucleoside-diphosphate reductase small chain OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=Ba71V-044 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.777e-23
Identity = 45/107 (42.06%), Postives = 70/107 (65.42%), Query Frame = 2 
Query:  290 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSL 610
            +L+E +QRF +FPI++ + W  YKK ++  WTA+EVD+ +D+  WE +   ++ F   +LAFF  +D IV+ENL   F+ +I++ E   FY  Q A E +HSE YS+
Sbjct:   11 LLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSI 117
The following BLAST results are available for this feature:
BLAST of FC868543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
RIR2_ASFB79.777e-2342.06Ribonucleoside-diphosphate reductase small chain O... [more]

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Properties
Property NameValue
Genbank descriptionC31001G01EF AbioticL1 Citrus clementina cDNA clone C31001G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868543 ID=FC868543; Name=FC868543; organism=Citrus clementina; type=EST; length=616bp
GATAGCCAAAGTCACTCAACAAACTGCCAAAGCAGAGGCAGGGAAACGAA
AGGCATGATCGTTCATCAGTCACTAACGATTTTGCTATCCATCAACAATT
GAAATTCTGTCCACTTGCTCTCTCTAACAAGAAGAGGTTTTTGCAGGGTT
TTATTACTTTTCTTTCTCTTCTCGCCACAAATAACAAAAACAGAACTTGT
GAGGAAAAATGGGTTCCTTGAAAAACGAAACAGAGAATGAAGTAAACCAA
CGTGAGCAGGGAGAACAAGAACAGGAAGACCAAGAGCCAATATTAATGGA
GCAAAACCAGAGGTTTTGTATGTTCCCCATAAGGTACAAGCAAGTTTGGG
AGATGTACAAGAAGGCTCAAGCCAGTTTCTGGACCGCCGAGGAGGTTGAT
CTTTCCCAGGATGTACAGCACTGGGAACGACTATTGGATTCTGAGAAACA
CTTTATAAGCCATGTGTTGGCATTCTTTGCTGCTTCTGATGGGATTGTTT
TGGAAAATTTGGCTGCAAGGTTCCTAAATGACATTCAAATTCCAGAGGCT
CGAGCATTTTATGGATTTCAAATAGCAATGGAGAATATTCATTCTGAGAT
GTACAGCTTGCTTCTG
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