FC868546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_RHOP2 (Glycogen synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=glgA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.069e-15 Identity = 56/155 (36.13%), Postives = 81/155 (52.26%), Query Frame = 1 Query: 88 GEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 G+D+ DN LRF L QA + L L Y D++ A+DW T L+P YL +P + K VF IHN+AYQG+F +E + LP + S D ++ Y I ++KAG+ +D + TVSP YA E + G D G+ L+ + Sbjct: 104 GKDWPDNALRFAALAQAGAAIGQGLLLG--------YAPDILH-AHDWQTGLVPAYLAYSGRP-----APKCVFTIHNLAYQGQFPYELLTRIGLPER-AFSLDGVEYYG------GIGYLKAGLQLADRITTVSPTYALE-IQGPDAGMGLEGL 236
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_ACIBL (Glycogen synthase OS=Acidobacteria bacterium (strain Ellin345) GN=glgA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.702e-15 Identity = 56/170 (32.94%), Postives = 81/170 (47.65%), Query Frame = 1 Query: 16 FVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGE 525 FVD+P + + +YG G DY DN RF + +A +E +IL G +F +DW ++LIP L+ +Y + AK+VF IHN+ YQG F E LL LP +D G K+N++K ++ +D V TVS YA E + E Sbjct: 85 FVDYPAYFDR------DALYGTPIG-DYHDNAERFALFSRAVIEGSKIL------------GVPDIFHCHDWQSALIPVLLRTLYAEDPAFDHAKIVFTIHNMGYQGLFPGEILPLLMLP------WDLFTLTKMEFYG-KVNFLKGALVYADFVTTVSRRYALEIQTAE 228
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_ELUMP (Glycogen synthase OS=Elusimicrobium minutum (strain Pei191) GN=glgA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.529e-15 Identity = 51/156 (32.69%), Postives = 80/156 (51.28%), Query Frame = 1 Query: 94 DYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR---KINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 DY DN RFI +A LE+ + + Y D++ A+DW L+P YLK +YK + + +F IHN+AYQG++ + F K+ F +D P R I+++K+GI+ +D V TVSP+YA+E E G ++ + Sbjct: 105 DYFDNDERFIFFNRAVLESCKFIG----------YRPDIIH-AHDWQAGLLPAYLKTVYKTDAFFTRTRSLFTIHNMAYQGQYPYSTF--------IKTGFHTVD--YVPERFEYYGGISYLKSGIVYADYVNTVSPNYAKEITLDEKMGFGMEGL 239
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_RHOBA (Glycogen synthase OS=Rhodopirellula baltica GN=glgA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.610e-15 Identity = 60/181 (33.15%), Postives = 88/181 (48.62%), Query Frame = 1 Query: 16 FVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF--KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 F+D P++ + +YG G DY DN RFI C+AA+ A L Y D+V NDW ++L+P L+A + + IHN+AYQG F F+ F L SF++ YN ++N++K G++ SD+V TVSP YA E + + G LD+I Sbjct: 97 FIDQPQYFRR------PSLYGDANG-DYHDNAERFIFYCRAAIIAMTRLG----------YPVDLVH-CNDWQSALVPALLRAASDNVAKTQPIATMLSIHNMAYQGNFGFDAFPWTGLSWDHFRPESFEY---YN------QLNFLKTGVVTSDVVSTVSPTYALE-IQTPEYGCGLDSI 249
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_THEM4 (Glycogen synthase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glgA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.863e-15 Identity = 54/144 (37.50%), Postives = 74/144 (51.39%), Query Frame = 1 Query: 121 IVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 I A LE ++L+L DV+ V NDW TSLIP YLK +YK Y + IHN+ YQG F + LP + + D I+ Y KIN++K GIL SD++ TVSP YA E + ++ G +LD + Sbjct: 111 IYFSAAVLETLKVLDLQM----------DVLHV-NDWQTSLIPVYLKTLYKEDEFYAKTVTLLTIHNLGYQGIFDSKYMEFSGLP-NYLYNIDGIEFYG------KINFLKGGILYSDIINTVSPTYANE-IQTKEYGEKLDGV 235
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_ANADF (Glycogen synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=glgA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.863e-15 Identity = 63/187 (33.69%), Postives = 87/187 (46.52%), Query Frame = 1 Query: 1 SRDRE---FVDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF--KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELD 546 SRDR FV+H F G +YG DY DN RF L +AAL P L L + + NDW T L+P L+ + A+ VF IHN+AYQG F+ L LP + +F D ++N++KAG++ +D + TVSP YA+E ++ GV LD Sbjct: 73 SRDRAPVYFVEHEHFFGSRRG-----LYGE--AHDYGDNAERFAYLARAALALPGALGLRPH-----------IVHLNDWQTGLVPFLLRREHARDAALAGARTVFTIHNLAYQGVFSKHVVPALGLPWDVFRYEAMEFHD---------QLNFLKAGLVFADALTTVSPTYARE-IATPQGGVGLD 231
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_THELT (Glycogen synthase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.027e-14 Identity = 50/129 (38.76%), Postives = 71/129 (55.04%), Query Frame = 1 Query: 166 LNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 + + KY S + D+V A+DW T L+P YLK +Y+ + VF IHN+ YQG F LPA + + D ++ Y +IN++K GIL SD+V TVSP YAQE + E G +LD + Sbjct: 122 IEAMKYLSETF--DIVH-AHDWQTGLVPVYLKTLYRTDPFFNRTATVFTIHNLGYQGVFNPGYMKFAGLPA-YLFNIDGLEFYG------QINFLKGGILFSDIVTTVSPTYAQE-IQTEQFGEKLDGV 239
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_THEAB (Glycogen synthase OS=Thermosipho africanus (strain TCF52B) GN=glgA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.341e-14 Identity = 48/119 (40.34%), Postives = 65/119 (54.62%), Query Frame = 1 Query: 199 GEDV-VFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 GE V V NDW T L+P YLK +YK + V+ IHN+ YQG F LP + + D I+ Y KIN++K GIL SD++ TVSP YAQE + ++ G +LD + Sbjct: 129 GEKVDVLHINDWQTGLVPVYLKTLYKDDEFFSKTVVLLTIHNLGYQGIFDSSYMNFSGLP-DYLYNIDGIEFYG------KINFLKGGILFSDVINTVSPTYAQE-IQTKEYGEKLDGV 239
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_LEPCP (Glycogen synthase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=glgA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.341e-14 Identity = 55/160 (34.38%), Postives = 81/160 (50.62%), Query Frame = 1 Query: 73 YGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGEDXGVELDNI 552 Y Y DN LRF +L A + L+ PY V A+DWH +L P YL+A+ +G + A V+ +HN+AYQG F FG L LPA + + ++ Y +I++MK G+ +D + TVSP YA+E + G + G LD + Sbjct: 102 YNDARQHPYDDNHLRFGLLGWVAAKLADGLD---------PYWAPRVVHAHDWHAALAPAYLRALEWARGR-RLAGSVYTVHNLAYQGFFPAHHFGDLGLPAAY-NQVHGLEFYG------QISFMKGGLYFADRITTVSPTYARE-IQGAEQGCGLDGL 243
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_FRAP2 (Glycogen synthase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=glgA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.752e-14 Identity = 53/151 (35.10%), Postives = 78/151 (51.66%), Query Frame = 1 Query: 73 YGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGE 525 Y + + Y DN LRF +L A L+ + +VV ++DWH L+P Y+KA G K+ K VF +HN+AYQG F F L+LP F S + ++ Y ++++MKAG+ +D + TVSP YA+E S E Sbjct: 99 YADSSNQAYADNYLRFALLGWVAARISEGLDAK--------WKPEVVH-SHDWHAGLVPAYIKASELASGK-KAVKTVFTVHNLAYQGLFPMSVFAELDLPGIF-LSMNGLEFYG------QVSFMKAGLYFADKITTVSPTYAKEIQSYE 232 The following BLAST results are available for this feature:
BLAST of FC868546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868546 ID=FC868546; Name=FC868546; organism=Citrus clementina; type=EST; length=552bpback to top |