FC868546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_ACTSZ (Glycogen synthase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=glgA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.797e-12 Identity = 58/169 (34.32%), Postives = 78/169 (46.15%), Query Frame = 1 Query: 19 VDHPRFLAKVWGKTQSKIYGPRTGEDYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGE 525 +D P A+ + Y + DY DN RF +L A E L+ + + V A+DWH L YL A P AK VF IHN+AYQG+FA L LP D + + G +I+++KAG+ SDMV TVSP YA+E + E Sbjct: 82 IDAPHLYAR-----EGNPYHDQWYNDYADNYKRFGLLGWVASELALGLDF---------WWQAEVVHAHDWHAGLASAYLAAKGHP------AKSVFTIHNLAYQGKFAARHLIELGLPV------DMFNVNGLELYG-EISYLKAGLFYSDMVTTVSPTYAKEITTTE 223
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_YERPY (Glycogen synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=glgA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12 Identity = 50/138 (36.23%), Postives = 71/138 (51.45%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 Y DN LRF +L A E L+ Y V A+DWH L YL A +P A+ VF +HN+AYQG F+ + L+LPA+F + ++ Y +I+++KAG+ +D V TVSP YA+E Sbjct: 103 YSDNYLRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLTCAYLAARGRP------ARSVFTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYG------QISYLKAGLFFADHVTTVSPTYAKE 218
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_YERPS (Glycogen synthase OS=Yersinia pseudotuberculosis GN=glgA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12 Identity = 50/138 (36.23%), Postives = 71/138 (51.45%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 Y DN LRF +L A E L+ Y V A+DWH L YL A +P A+ VF +HN+AYQG F+ + L+LPA+F + ++ Y +I+++KAG+ +D V TVSP YA+E Sbjct: 103 YSDNYLRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLTCAYLAARGRP------ARSVFTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYG------QISYLKAGLFFADHVTTVSPTYAKE 218
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_YERPP (Glycogen synthase OS=Yersinia pestis (strain Pestoides F) GN=glgA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12 Identity = 50/138 (36.23%), Postives = 71/138 (51.45%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 Y DN LRF +L A E L+ Y V A+DWH L YL A +P A+ VF +HN+AYQG F+ + L+LPA+F + ++ Y +I+++KAG+ +D V TVSP YA+E Sbjct: 103 YSDNYLRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLTCAYLAARGRP------ARSVFTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYG------QISYLKAGLFFADHVTTVSPTYAKE 218
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_YERPN (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=glgA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12 Identity = 50/138 (36.23%), Postives = 71/138 (51.45%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 Y DN LRF +L A E L+ Y V A+DWH L YL A +P A+ VF +HN+AYQG F+ + L+LPA+F + ++ Y +I+++KAG+ +D V TVSP YA+E Sbjct: 103 YSDNYLRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLTCAYLAARGRP------ARSVFTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYG------QISYLKAGLFFADHVTTVSPTYAKE 218
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_YERPG (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=glgA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12 Identity = 50/138 (36.23%), Postives = 71/138 (51.45%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 Y DN LRF +L A E L+ Y V A+DWH L YL A +P A+ VF +HN+AYQG F+ + L+LPA+F + ++ Y +I+++KAG+ +D V TVSP YA+E Sbjct: 103 YSDNYLRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLTCAYLAARGRP------ARSVFTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYG------QISYLKAGLFFADHVTTVSPTYAKE 218
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_YERPE (Glycogen synthase OS=Yersinia pestis GN=glgA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12 Identity = 50/138 (36.23%), Postives = 71/138 (51.45%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 Y DN LRF +L A E L+ Y V A+DWH L YL A +P A+ VF +HN+AYQG F+ + L+LPA+F + ++ Y +I+++KAG+ +D V TVSP YA+E Sbjct: 103 YSDNYLRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLTCAYLAARGRP------ARSVFTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYG------QISYLKAGLFFADHVTTVSPTYAKE 218
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_YERPB (Glycogen synthase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=glgA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12 Identity = 50/138 (36.23%), Postives = 71/138 (51.45%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 Y DN LRF +L A E L+ Y V A+DWH L YL A +P A+ VF +HN+AYQG F+ + L+LPA+F + ++ Y +I+++KAG+ +D V TVSP YA+E Sbjct: 103 YSDNYLRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLTCAYLAARGRP------ARSVFTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYG------QISYLKAGLFFADHVTTVSPTYAKE 218
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_YERPA (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=glgA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12 Identity = 50/138 (36.23%), Postives = 71/138 (51.45%), Query Frame = 1 Query: 97 YQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 510 Y DN LRF +L A E L+ Y V A+DWH L YL A +P A+ VF +HN+AYQG F+ + L+LPA+F + ++ Y +I+++KAG+ +D V TVSP YA+E Sbjct: 103 YSDNYLRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLTCAYLAARGRP------ARSVFTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYG------QISYLKAGLFFADHVTTVSPTYAKE 218
BLAST of FC868546 vs. ExPASy Swiss-Prot
Match: GLGA_DESDG (Glycogen synthase OS=Desulfovibrio desulfuricans (strain G20) GN=glgA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12 Identity = 51/145 (35.17%), Postives = 69/145 (47.59%), Query Frame = 1 Query: 94 DYQDNQLRFIVLCQAALEAPRILNLNSNKYFSGPYGEDVVFV-ANDWHTSLIPCYLKAMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQETVSGE 525 DY DN RF+ C+AA R L GE V A+DW T+L+P L + ++ + V IHN+A+QGRF+ F LP Q S D ++ Y N +K GI +D V TVSP YA+E + E Sbjct: 107 DYFDNCERFVFFCRAAASMCRRL------------GEAPAVVHAHDWQTALLPALLYHWRRYDSFWEDTRTVMTIHNLAFQGRFSSRLFENCGLPPQ-AWSMDGVEFYG------DFNLLKGGIAYADKVTTVSPSYAREITTPE 232 The following BLAST results are available for this feature:
BLAST of FC868546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868546 ID=FC868546; Name=FC868546; organism=Citrus clementina; type=EST; length=552bpback to top |